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List of works by Gene W Yeo

A Model for Neural Development and Treatment of Rett Syndrome Using Human Induced Pluripotent Stem Cells ⬇️

scientific article (publication date: 12 November 2010)

A Transcriptome-wide Translational Program Defined by LIN28B Expression Level

scientific article published on 06 December 2018

A multi-scale map of cell structure fusing protein images and interactions

scientific article published on 24 November 2021

A protein-RNA interaction atlas of the ribosome biogenesis factor AATF

scientific article published on 30 July 2019

Active Protein Neddylation or Ubiquitylation Is Dispensable for Stress Granule Dynamics

article

Allele-specific binding of RNA-binding proteins reveals functional genetic variants in the RNA

article

Alternative Splicing in Stem Cell Self-Renewal and Diferentiation ⬇️

scientific article published on January 1, 2010

Alternative Splicing of a Novel Inducible Exon Diversifies the CASK Guanylate Kinase Domain ⬇️

scientific article published on September 12, 2012

An in vivo genome-wide CRISPR screen identifies the RNA-binding protein Staufen2 as a key regulator of myeloid leukemia

scientific article published on 20 April 2020

Base editing: advances and therapeutic opportunities

scientific article published on 19 October 2020

Blurred Boundaries: The RNA Binding Protein Lin28A Is Also an Epigenetic Regulator.

scientific article published in January 2016

CRISPR/Cas9-mediated integration enables TAG-eCLIP of endogenously tagged RNA binding proteins

scientific article published on 18 December 2016

Circadian Oscillations of Protein-Coding and Regulatory RNAs in a Highly Dynamic Mammalian Liver Epigenome ⬇️

scientific article published on December 5, 2012

Complex Oscillatory Waves Emerging from Cortical Organoids Model Early Human Brain Network Development

scientific article published on 29 August 2019

Comprehensive Identification of miRNA Target Sites in Live Animals ⬇️

scientific article published on January 1, 2011

Context-Dependent and Disease-Specific Diversity in Protein Interactions within Stress Granules

scientific article published in January 2018

Crosstalk between CRISPR-Cas9 and the human transcriptome

scientific article published on 02 March 2022

Direct RNA sequencing enables m6A detection in endogenous transcript isoforms at base-specific resolution

scientific article published on 17 October 2019

Disruption in A-to-I Editing Levels Affects C. elegans Development More Than a Complete Lack of Editing

scientific article published on 01 April 2019

Disruption of RNA Metabolism in Neurological Diseases and Emerging Therapeutic Interventions

scientific article published on 01 April 2019

Elimination of Toxic Microsatellite Repeat Expansion RNA by RNA-Targeting Cas9.

scientific article

Enhanced CLIP Uncovers IMP Protein-RNA Targets in Human Pluripotent Stem Cells Important for Cell Adhesion and Survival

scientific article published on 7 April 2016

Expanded encyclopaedias of DNA elements in the human and mouse genomes

scientific article published on 29 July 2020

Functional Genomic Analysis of the let-7 Regulatory Network in Caenorhabditis elegans ⬇️

scientific article published on March 14, 2013

Gain-of-function cardiomyopathic mutations in RBM20 rewire splicing regulation and re-distribute ribonucleoprotein granules within processing bodies

scientific article published on 03 November 2021

Genome‐wide approaches in the study of microRNA biology ⬇️

scientific article published on December 31, 2010

Glial cells maintain synapses by inhibiting an activity-dependent retrograde protease signal

article

Integrative Genome-wide Analysis Reveals Cooperative Regulation of Alternative Splicing by hnRNP Proteins ⬇️

scientific article published on February 23, 2012

L1 retrotransposition in neurons is modulated by MeCP2 ⬇️

scientific article published on November 18, 2010

LIN-28 co-transcriptionally binds primary let-7 to regulate miRNA maturation in Caenorhabditis elegans ⬇️

scientific article published on February 6, 2011

Large-scale evaluation of the ability of RNA-binding proteins to activate exon inclusion

scientific article published in 2024

Large-scale tethered function assays identify factors that regulate mRNA stability and translation

scientific article published on 17 August 2020

Making the cut in the dark genome

scientific article published in November 2016

Metadensity: a background-aware python pipeline for summarizing CLIP signals on various transcriptomic sites

scientific article published in 2022

Misregulated RNA processing in amyotrophic lateral sclerosis ⬇️

scientific article published on 03 March 2012

NEAT1 scaffolds RNA-binding proteins and the Microprocessor to globally enhance pri-miRNA processing

scientific article

Nxf1 natural variant E610G is a semi-dominant suppressor of IAP-induced RNA processing defects

scientific article (publication date: April 2015)

Overriding FUS autoregulation in mice triggers gain-of-toxic dysfunctions in RNA metabolism and autophagy-lysosome axis

article

Pairing beyond the Seed Supports MicroRNA Targeting Specificity

scientific article published on 21 September 2016

Patch-Seq Protocol to Analyze the Electrophysiology, Morphology and Transcriptome of Whole Single Neurons Derived From Human Pluripotent Stem Cells

article

Peptide Brush Polymers for Efficient Delivery of a Gene Editing Protein to Stem Cells

scientific article published on 18 September 2019

Pervasive Chromatin-RNA Binding Protein Interactions Enable RNA-Based Regulation of Transcription

scientific article published on 01 June 2019

Plant-derived flavanol (-)epicatechin enhances angiogenesis and retention of spatial memory in mice

scientific article published in May 2007

Predicting the functional states of human iPSC-derived neurons with single-cell RNA-seq and electrophysiology

scientific article published on 04 October 2016

Protein-RNA Networks Regulated by Normal and ALS-Associated Mutant HNRNPA2B1 in the Nervous System

scientific article published on 13 October 2016

RBP-Maps enables robust generation of splicing regulatory maps

article

RNA-Seq Analysis of Gene Expression and Alternative Splicing by Double-Random Priming Strategy ⬇️

scientific article published on January 1, 2011

RNA-binding protein CPEB1 remodels host and viral RNA landscapes

scientific article published on 24 October 2016

RNA-targeting CRISPR systems from metagenomic discovery to transcriptomic engineering

scientific article published on 03 February 2020

Rbfox2 function in RNA metabolism is impaired in hypoplastic left heart syndrome patient hearts

scientific article published on 03 August 2016

Regulation of RNA editing by RNA-binding proteins in human cells

article

Repeat RNA expansion disorders of the nervous system: post-transcriptional mechanisms and therapeutic strategies

scientific article published on 10 November 2020

Resources for the Comprehensive Discovery of Functional RNA Elements

scientific article published on March 2016

Retrotransposon long interspersed nucleotide element‐1 (LINE‐1) is activated during salamander limb regeneration ⬇️

scientific article published on August 23, 2012

Robust single-cell discovery of RNA targets of RNA-binding proteins and ribosomes

scientific article published on 07 May 2021

Self-Transfecting Micellar RNA: Modulating Nanoparticle Cell Interactions via High Density Display of Small Molecule Ligands on Micelle Coronas

scientific article published on 29 December 2017

Short poly(A) tails are a conserved feature of highly expressed genes

scientific article

Small-Molecule Modulation of TDP-43 Recruitment to Stress Granules Prevents Persistent TDP-43 Accumulation in ALS/FTD

scientific article published on 01 July 2019

Th17 Lymphocytes Induce Neuronal Cell Death in a Human iPSC-Based Model of Parkinson's Disease

scientific article published on 01 June 2019

The Calcineurin Variant CnAβ1 Controls Mouse Embryonic Stem Cell Differentiation by Directing mTORC2 Membrane Localization and Activation

scientific article published on 28 September 2016

The Clothes Make the mRNA: Past and Present Trends in mRNP Fashion

scientific article

The RNA Helicase DDX6 Controls Cellular Plasticity by Modulating P-Body Homeostasis

scientific article published on 03 October 2019

The ViReflow pipeline enables user friendly large scale viral consensus genome reconstruction

scientific article published on 24 March 2022

The sustained expression of Cas9 targeting toxic RNAs reverses disease phenotypes in mouse models of myotonic dystrophy type 1

scientific article published on 14 September 2020

Variation in single-nucleotide sensitivity of eCLIP derived from reverse transcription conditions

scientific article published on 5 August 2017

Widespread RNA editing dysregulation in brains from autistic individuals

scientific article published on 17 December 2018

fSHAPE, fSHAPE-eCLIP, and SHAPE-eCLIP probe transcript regions that interact with specific proteins

scientific article published on 25 August 2021

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