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List of works by Sylvia Plevritis

-Expressing Cancer-Associated Fibroblasts Mediate Metabolic Reprogramming in Human Lung Adenocarcinoma

A Molecular Subtype-Specific Stochastic Simulation Model of US Breast Cancer Incidence, Survival, and Mortality Trends from 1975 to 2010.

scientific article published in April 2018

A Simulation Model Investigating the Impact of Tumor Volume Doubling Time and Mammographic Tumor Detectability on Screening Outcomes in Women Aged 40–49 Years ⬇️

scientific article published on July 27, 2010

A comparative modeling analysis of risk-based lung cancer screening strategies

scientific article published on 30 September 2019

A comparative review of CISNET breast models used to analyze U.S. breast cancer incidence and mortality trends

scientific article published on January 2006

A framework for evaluating the cost-effectiveness of MRI screening for breast cancer

scientific article published on 01 January 2000

A human lung tumor microenvironment interactome identifies clinically relevant cell-type cross-talk

scientific article published on 07 May 2020

A mathematical algorithm that computes breast cancer sizes and doubling times detected by screening

scientific article published on June 2001

A natural history model of stage progression applied to breast cancer

scientific article published on 01 February 2007

A pluripotency signature predicts histologic transformation and influences survival in follicular lymphoma patients

scientific article published on 27 July 2009

A radiogenomic dataset of non-small cell lung cancer

scientific article published on 16 October 2018

A simulation model to predict the impact of prophylactic surgery and screening on the life expectancy of BRCA1 and BRCA2 mutation carriers

scientific article

A stochastic simulation model of U.S. breast cancer mortality trends from 1975 to 2000.

scientific article published on January 2006

ARF: connecting senescence and innate immunity for clearance

scientific article published on 25 September 2015

Association of Screening and Treatment With Breast Cancer Mortality by Molecular Subtype in US Women, 2000-2012.

scientific article published in January 2018

Association of a leukemic stem cell gene expression signature with clinical outcomes in acute myeloid leukemia.

scientific article

Bayesian Gene Set Analysis for Identifying Significant Biological Pathways ⬇️

scientific article published on August 1, 2011

Benefits and harms of computed tomography lung cancer screening strategies: a comparative modeling study for the U.S. Preventive Services Task Force

scientific article

Boolean implication networks derived from large scale, whole genome microarray datasets

scientific article published on 30 October 2008

Breast disease: dynamic spiral MR imaging

scientific article published on November 1998

Breast magnetic resonance image screening and ductal lavage in women at high genetic risk for breast carcinoma

scientific article

Bridging population and tissue scale tumor dynamics: a new paradigm for understanding differences in tumor growth and metastatic disease

scientific article published on 09 January 2014

CCAST: a model-based gating strategy to isolate homogeneous subpopulations in a heterogeneous population of single cells

scientific article

Caution Needed for Analyzing the Risks of Second Cancers

scientific article published on 01 September 2018

Change in Survival in Metastatic Breast Cancer with Treatment Advances: Meta-Analysis and Systematic Review

scholarly article published November 2018

Characterization of patient specific signaling via augmentation of Bayesian networks with disease and patient state nodes

scientific article published on January 2009

Collaborative Modeling of the Benefits and Harms Associated With Different U.S. Breast Cancer Screening Strategies

scientific article published on 12 January 2016

Common Model Inputs Used in CISNET Collaborative Breast Cancer Modeling

Comparative analysis of 5 lung cancer natural history and screening models that reproduce outcomes of the NLST and PLCO trials.

scientific article

Comparing CISNET Breast Cancer Incidence and Mortality Predictions to Observed Clinical Trial Results of Mammography Screening from Ages 40 to 49.

scientific article published in April 2018

Comparing CISNET Breast Cancer Models Using the Maximum Clinical Incidence Reduction Methodology

scientific article published in April 2018

Comparing benefits from many possible computed tomography lung cancer screening programs: extrapolating from the National Lung Screening Trial using comparative modeling

scientific article

Comparing the benefits of screening for breast cancer and lung cancer using a novel natural history model ⬇️

scientific article published on November 25, 2011

Contrast-enhanced MRI of ductal carcinoma in situ: characteristics of a new intensity-modulated parametric mapping technique correlated with histopathologic findings

scientific article published in October 2005

Contributions of Screening and Treatment to Mortality From Breast Cancer-Reply

scientific article published on 01 June 2018

Correction: Risk prediction models for selection of lung cancer screening candidates: A retrospective validation study

scientific article published on 25 September 2020

Cost-Effectiveness Analysis of Lung Cancer Screening Accounting for the Effect of Indeterminate Findings

scientific article published on 23 May 2019

Cost-Effectiveness Analysis of Lung Cancer Screening in the United States

scientific article published on 01 May 2020

Cost-Effectiveness Analysis of Lung Cancer Screening in the United States: A Comparative Modeling Study

scientific article published on 05 November 2019

Cost-effectiveness of screening BRCA1/2 mutation carriers with breast magnetic resonance imaging

scientific article published in May 2006

Cross-species functional analysis of cancer-associated fibroblasts identifies a critical role for CLCF1 and IL-6 in non-small cell lung cancer in vivo.

scientific article published on 07 September 2012

CytoSPADE: high-performance analysis and visualization of high-dimensional cytometry data

scientific article

DRUG-NEM: Optimizing drug combinations using single-cell perturbation response to account for intratumoral heterogeneity

scientific article published on 13 April 2018

Decision analysis and simulation modeling for evaluating diagnostic tests on the basis of patient outcomes

scientific article published on 01 September 2005

Digital storage phosphor chest radiography: an ROC study of the effect of 2K versus 4K matrix size on observer performance

scientific article published on February 2001

Discovering biological progression underlying microarray samples

scientific article

Disparities of national lung cancer screening guidelines in the U.S. population

scientific article published on 10 February 2020

Distinguishing between CISNET model results versus CISNET models

scientific article published on 26 December 2017

Diversity of model approaches for breast cancer screening: a review of model assumptions by the Cancer Intervention and Surveillance Network (CISNET) Breast Cancer Groups.

scientific article

Ductal lavage of fluid-yielding and non-fluid-yielding ducts in BRCA1 and BRCA2 mutation carriers and other women at high inherited breast cancer risk

scientific article published in May 2005

Ductal pattern enhancement on magnetic resonance imaging of the breast due to ductal lavage

scientific article

Effect of screening and adjuvant therapy on mortality from breast cancer

scientific article

Effects of mammography screening under different screening schedules: model estimates of potential benefits and harms

scientific article

Effects of screening and systemic adjuvant therapy on ER-specific US breast cancer mortality

scientific article

Estimating Breast Cancer Survival by Molecular Subtype in the Absence of Screening and Adjuvant Treatment.

scientific article published in April 2018

Ethical issues in contrast-enhanced magnetic resonance imaging screening for breast cancer

scientific article

Evaluating the impact of varied compliance to lung cancer screening recommendations using a microsimulation model.

scientific article published on 12 July 2017

Extracting a cellular hierarchy from high-dimensional cytometry data with SPADE

scientific article

Extracting binary signals from microarray time-course data

scientific article

Fast calculation of pairwise mutual information for gene regulatory network reconstruction

scientific article published on 22 January 2009

Feasibility evaluation of an online tool to guide decisions for BRCA1/2 mutation carriers

scientific article

Genomic and proteomic analysis reveals a threshold level of MYC required for tumor maintenance

scientific article

Glioblastoma Multiforme: Exploratory Radiogenomic Analysis by Using Quantitative Image Features.

scientific article published in July 2015

Glioblastoma multiforme: exploratory radiogenomic analysis by using quantitative image features

scientific article

Hierarchy in somatic mutations arising during genomic evolution and progression of follicular lymphoma

scientific article published on 7 January 2013

Identification of ovarian cancer driver genes by using module network integration of multi-omics data

scientific article

Identification of ovarian cancer driver genes by using module network integration of multi-omics data

Identifying master regulators of cancer and their downstream targets by integrating genomic and epigenomic features ⬇️

scientific article published on January 1, 2013

Impact of adjuvant therapy and mammography on U.S. mortality from 1975 to 2000: comparison of mortality results from the cisnet breast cancer base case analysis

scientific article published on 01 January 2006

Improvements in observed and relative survival in follicular grade 1-2 lymphoma during 4 decades: the Stanford University experience

scientific article published on 18 June 2013

Incidental extracardiac findings at coronary CT: clinical and economic impact

scientific article published on June 2010

Integrating Tumor and Stromal Gene Expression Signatures With Clinical Indices for Survival Stratification of Early-Stage Non-Small Cell Lung Cancer.

scientific article published on 18 August 2015

Intestinal Enteroendocrine Lineage Cells Possess Homeostatic and Injury-Inducible Stem Cell Activity

scientific article published in July 2017

Introduction to the Cancer Intervention and Surveillance Modeling Network (CISNET) Breast Cancer Models

scientific article published on 01 April 2018

Ly6d marks the earliest stage of B-cell specification and identifies the branchpoint between B-cell and T-cell development

scientific journal article

Ly6d marks the earliest stage of B-cell specification and identifies the branchpoint between B-cell and T-cell development.

scientific article published in September 2013

Lymphomas that recur after MYC suppression continue to exhibit oncogene addiction ⬇️

scientific article published on October 3, 2011

MRS imaging using anatomically based k-space sampling and extrapolation

scientific article published in November 1995

Magnetic resonance imaging characteristics of fibrocystic change of the breast

scientific article published in July 2005

Mapping lung cancer epithelial-mesenchymal transition states and trajectories with single-cell resolution

scientific article published on 06 December 2019

MiDReG: a method of mining developmentally regulated genes using Boolean implications

scientific article

Modeling disease progression in outcomes research

scientific article published on 01 January 1999

Modeling the impact of population screening on breast cancer mortality in the United States

scientific article

Modeling the transition of lung cancer from early to advanced stage

scientific article

Molecular subtyping for clinically defined breast cancer subgroups

scientific article

Multi-omic single-cell snapshots reveal multiple independent trajectories to drug tolerance in a melanoma cell line

scientific article published on 11 May 2020

Mutations in early follicular lymphoma progenitors are associated with suppressed antigen presentation

scientific article

NF-κB protein expression associates with (18)F-FDG PET tumor uptake in non-small cell lung cancer: a radiogenomics validation study to understand tumor metabolism

scientific article

Non-Small Cell Lung Cancer Radiogenomics Map Identifies Relationships between Molecular and Imaging Phenotypes with Prognostic Implications.

scientific article

Non-small cell lung cancer: identifying prognostic imaging biomarkers by leveraging public gene expression microarray data--methods and preliminary results

scientific article

Oncogenic transformation of diverse gastrointestinal tissues in primary organoid culture

scientific article

Online tool to guide decisions for BRCA1/2 mutation carriers

scientific article published on 9 January 2012

Opinions of women with high inherited breast cancer risk about prophylactic mastectomy: an initial evaluation from a screening trial including magnetic resonance imaging and ductal lavage

scientific article published in September 2005

PS01.77: Risk-Stratification for Second Primary Lung Cancer: Topic: Medical Oncology

scientific article published on 28 October 2016

Pancancer analysis of DNA methylation-driven genes using MethylMix

scientific article published on 29 January 2015

Precision Medicine in Pancreatic Disease-Knowledge Gaps and Research Opportunities: Summary of a National Institute of Diabetes and Digestive and Kidney Diseases Workshop

scientific article published on 01 November 2019

Prediction of EGFR and KRAS mutation in non-small cell lung cancer using quantitative 18F FDG-PET/CT metrics

scientific article published on 10 May 2017

Prediction of survival in diffuse large B-cell lymphoma based on the expression of 2 genes reflecting tumor and microenvironment

scientific article

Predictive radiogenomics modeling of EGFR mutation status in lung cancer

scientific article published on 31 January 2017

Prognostic PET 18F-FDG uptake imaging features are associated with major oncogenomic alterations in patients with resected non-small cell lung cancer

scientific article published on 18 June 2012

Quantitative proteomic profiling identifies protein correlates to EGFR kinase inhibition

scientific article published on 12 March 2012

Raising the bar for the U.S. Preventive Services Task Force

scientific article published in October 2014

Re: Think before you leap.

scientific article

Reconstructing Directed Signed Gene Regulatory Network From Microarray Data ⬇️

scientific article published on July 29, 2011

Reducing the computational complexity of information theoretic approaches for reconstructing gene regulatory networks

scientific article published on February 2010

Risk Stratification for Second Primary Lung Cancer

scientific article published on 23 June 2017

Risk prediction models for selection of lung cancer screening candidates: A retrospective validation study

scientific article

Risk-Based lung cancer screening: A systematic review

scientific article published on 12 July 2020

Simulation-based parameter estimation for complex models: a breast cancer natural history modelling illustration

scientific article published in December 2004

Simultaneous class discovery and classification of microarray data using spectral analysis

scientific article

Single-cell mass cytometry of differential immune and drug responses across a human hematopoietic continuum

scientific article

Sparse discriminative latent characteristics for predicting cancer drug sensitivity from genomic features

scientific article published on 28 May 2019

Spectral extrapolation of spatially bounded images [MRI application].

scientific article published in January 1995

Survival analysis of cancer risk reduction strategies for BRCA1/2 mutation carriers

scientific article

TRAIL-induced variation of cell signaling states provides nonheritable resistance to apoptosis

scientific article published on 08 November 2019

The effect of age, race, tumor size, tumor grade, and disease stage on invasive ductal breast cancer survival in the U.S. SEER database

scientific article published in January 2005

The impact of overdiagnosis on the selection of efficient lung cancer screening strategies

scientific article

The prognostic landscape of genes and infiltrating immune cells across human cancers

scientific article published on 20 July 2015

TreeVis: A MATLAB-based tool for tree visualization ⬇️

scientific article published on October 1, 2012

Visualization and cellular hierarchy inference of single-cell data using SPADE.

scientific article

Visualization, benchmarking and characterization of nested single-cell heterogeneity as dynamic forest mixtures

p19ARF is a critical mediator of both cellular senescence and an innate immune response associated with MYC inactivation in mouse model of acute leukemia

scientific article

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