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List of works by William D Orsi

A 16S rRNA gene sequencing and analysis protocol for the Illumina MiniSeq platform.

scientific article published on 25 March 2018

Active eukaryotes in microbialites from Highborne Cay, Bahamas, and Hamelin Pool (Shark Bay), Australia

scientific article

Anaerobic metabolism of Foraminifera thriving below the seafloor

scientific article published on 08 July 2020

Archaea dominate oxic subseafloor communities over multimillion-year time scales.

scientific article published on 19 June 2019

Author Correction: Metabolic activity analyses demonstrate that Lokiarchaeon exhibits homoacetogenesis in sulfidic marine sediments

scientific article published on 29 April 2020

Biodegradation of textile waste by marine bacterial communities enhanced by light

scientific article published on 14 May 2020

Carbon assimilating fungi from surface ocean to subseafloor revealed by coupled phylogenetic and stable isotope analysis

scientific article published on 11 December 2021

Class Cariacotrichea, a novel ciliate taxon from the anoxic Cariaco Basin, Venezuela.

scientific article

Climate oscillations reflected within the microbiome of Arabian Sea sediments.

scientific article published on 20 July 2017

Constant Flux of Spatial Niche Partitioning through High-Resolution Sampling of Magnetotactic Bacteria

scientific article

Deep sequencing of subseafloor eukaryotic rRNA reveals active Fungi across marine subsurface provinces

scientific article

Diverse, uncultivated bacteria and archaea underlying the cycling of dissolved protein in the ocean

scientific article

Ecology and evolution of seafloor and subseafloor microbial communities

article

Ecophysiology of uncultivated marine euryarchaea is linked to particulate organic matter.

scientific article

Effect of oxygen minimum zone formation on communities of marine protists

scientific article

Effects of organic matter and low oxygen on the mycobenthos in a coastal lagoon

article

Environmental selection of protistan plankton communities in hypersaline anoxic deep-sea basins, Eastern Mediterranean Sea

scientific article

Evidence for isolated evolution of deep-sea ciliate communities through geological separation and environmental selection

scientific article (publication date: 8 July 2013)

Evolution of the plankton paleome in the Black Sea from the Deglacial to Anthropocene

scientific article (publication date: 21 May 2013)

Exploring the abundance, metabolic potential, and gene expression of subseafloor Chloroflexi in million-year-old oxic and anoxic abyssal clay

scientific article published on 05 November 2020

Fluid mixing and the deep biosphere of a fossil Lost City-type hydrothermal system at the Iberia Margin

scientific article

Gene expression in the deep biosphere

scientific article published on 12 June 2013

Genealogical analyses of multiple loci of litostomatean ciliates (Protista, Ciliophora, Litostomatea) ⬇️

scientific article published on July 10, 2012

Genome Evolution in Bacteria Isolated from Million-Year-Old Subseafloor Sediment

scientific article published on 17 August 2021

Genomic and proteomic characterization of "Candidatus Nitrosopelagicus brevis": an ammonia-oxidizing archaeon from the open ocean

scientific article

High-resolution vertical biogeochemical profiles in the hyporheic zone reveal insights into microbial methane cycling

scientific article published in 2022

Identifying protist consumers of photosynthetic picoeukaryotes in the surface ocean using stable isotope probing

scientific article

Lake Sedimentary DNA Research on Past Terrestrial and Aquatic Biodiversity: Overview and Recommendations

scientific article published on 14 February 2021

Linking Uncultivated Microbial Populations and Benthic Carbon Turnover by Using Quantitative Stable Isotope Probing

scientific article published on 31 August 2018

Living at the Limits: Evidence for Microbial Eukaryotes Thriving under Pressure in Deep Anoxic, Hypersaline Habitats

article

Massively parallel tag sequencing reveals the complexity of anaerobic marine protistan communities

scientific article

Metabolic activity analyses demonstrate that Lokiarchaeon exhibits homoacetogenesis in sulfidic marine sediments

scientific article published on 23 December 2019

Metabolic potential of microbial communities from ferruginous sediments

scientific article published on 16 October 2018

Microbial Activities and Selection from Surface Ocean to Subseafloor on the Namibian Continental Shelf

scientific article published on 11 April 2022

Microbial community composition along a 50 000-year lacustrine sediment sequence.

scientific article published in April 2018

Molecular and morphological evidence for a sister group relationship of the classes Armophorea and Litostomatea (Ciliophora, Intramacronucleata, Lamellicorticata infraphyl. nov.), with an account on basal litostomateans.

scientific article published on 9 September 2010

Morphological and molecular phylogeny of dileptid and tracheliid ciliates: resolution at the base of the class Litostomatea (Ciliophora, Rhynchostomatia)

scientific article

Phylogeny and classification of the Litostomatea (Protista, Ciliophora), with emphasis on free-living taxa and the 18S rRNA gene ⬇️

scientific article published on February 17, 2011

Physiological limits to life in anoxic subseafloor sediment

scientific article published on 17 February 2020

Predicted microbial secretomes and their target substrates in marine sediment.

scientific article published on 23 October 2017

Prevalence of partnerships between bacteria and ciliates in oxygen-depleted marine water columns.

scientific article

Protistan community patterns within the brine and halocline of deep hypersaline anoxic basins in the eastern Mediterranean Sea.

scientific article published on 5 December 2008

Protistan microbial observatory in the Cariaco Basin, Caribbean. I. Pyrosequencing vs Sanger insights into species richness

scientific article

Protistan microbial observatory in the Cariaco Basin, Caribbean. II. Habitat specialization.

scientific article

Quantifying population-specific growth in benthic bacterial communities under low oxygen using H218O

scientific article published on 19 February 2019

Quantifying the effects of hydrogen on carbon assimilation in a seafloor microbial community associated with ultramafic rocks

scientific article published on 26 July 2021

Quantitative microbial ecology: future challenges and opportunities

scientific article published in 2022

The transcriptional response of microbial communities in thawing Alaskan permafrost soils.

scientific article

Transcriptional analysis of sulfate reducing and chemolithoautotrophic sulfur oxidizing bacteria in the deep subseafloor

scientific article published on 18 March 2016

Viral activities and life cycles in deep subseafloor sediments.

scientific article published on 24 June 2015

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