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List of works by Vincent Colot

50 years of Arabidopsis research: highlights and future directions

scientific article published on 14 October 2015

A role for RNAi in the selective correction of DNA methylation defects

scientific article published on 29 January 2009

A versatile Multisite Gateway-compatible promoter and transgenic line collection for cell type-specific functional genomics in Arabidopsis

scientific article published on 14 December 2015

Additive inheritance of histone modifications in Arabidopsis thaliana intra-specific hybrids

scientific article published on 11 July 2011

Analysis of Small RNA Populations Using Hybridization to DNA Tiling Arrays

scientific article

Analysis of Small RNA Populations Using Hybridization to DNA Tiling Arrays

Arabidopsis TFL2/LHP1 Specifically Associates with Genes Marked by Trimethylation of Histone H3 Lysine 27

article

Arabidopsis TFL2/LHP1 specifically associates with genes marked by trimethylation of histone H3 lysine 27.

scientific article

Arabidopsis epigenetics: when RNA meets chromatin.

scientific article

Assessing the impact of transgenerational epigenetic variation on complex traits

scientific article published on 26 June 2009

Cell Type-Specific Profiling of Chromatin Modifications and Associated Proteins

scientific article

Chromatin indexing in Arabidopsis: an epigenomic tale of tails and more

scientific article published on 21 October 2009

Chromosome structural proteins and RNA-mediated epigenetic silencing

scientific article

Comparative epigenomics in the Brassicaceae reveals two evolutionarily conserved modes of PRC2-mediated gene regulation.

scientific article published on 31 October 2017

Correction: Misregulation of AUXIN RESPONSE FACTOR 8 Underlies the Developmental Abnormalities Caused by Three Distinct Viral Silencing Suppressors in Arabidopsis

scientific article published on 5 May 2016

Correction: The Arabidopsis miR472-RDR6 silencing pathway modulates PAMP- and effector-triggered immunity through the post-transcriptional control of disease resistance genes.

scientific article published on 10 April 2015

DNA DAMAGE BINDING PROTEIN 2 (DDB2) Shapes the DNA Methylation Landscape

scientific article published on 16 August 2016

DNA methylation dynamics during early plant life

scientific article published on 25 September 2017

Dependence of heterochromatic histone H3 methylation patterns on the Arabidopsis gene DDM1.

scientific article

Direct conversion of root primordium into shoot meristem relies on timing of stem cell niche development.

scientific article

Epialleles in plant evolution

scientific article

Epigenetic basis of morphological variation and phenotypic plasticity in Arabidopsis thaliana

scientific article published on 10 February 2015

Epigenetic diversity increases the productivity and stability of plant populations

scientific article

Epigenetic natural variation in Arabidopsis thaliana

scientific article

Epigenetic variation creates potential for evolution of plant phenotypic plasticity

scientific article published on November 2012

Epigenome dynamics: a quantitative genetics perspective.

scientific article

Epigenomic mapping in Arabidopsis using tiling microarrays

scientific article

Evaluation of MeDIP-chip in the context of whole-genome bisulfite sequencing (WGBS-seq) in Arabidopsis

scientific article

Extensive natural epigenetic variation at a de novo originated gene

scientific article

Features of the Arabidopsis recombination landscape resulting from the combined loss of sequence variation and DNA methylation

scientific article

Gene body DNA methylation in plants: a means to an end or an end to a means?

scientific article published in April 2009

Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation.

scientific article published on 2 February 2015

Genome-Wide Epigenetic Perturbation Jump-Starts Patterns of Heritable Variation Found in Nature ⬇️

scientific article published on May 19, 2011

Genome-wide analysis of DNA methylation in Arabidopsis using MeDIP-chip.

scientific article published in January 2014

Genome-wide evidence for local DNA methylation spreading from small RNA-targeted sequences in Arabidopsis

scientific article

Genome-wide negative feedback drives transgenerational DNA methylation dynamics in Arabidopsis.

scientific article published on 22 April 2015

Highly dynamic and sex-specific expression of microRNAs during early ES cell differentiation

scientific article

Histone H1 protects telomeric repeats from H3K27me3 invasion in Arabidopsis

scientific article published in 2023

Histone H2B monoubiquitination facilitates the rapid modulation of gene expression during Arabidopsis photomorphogenesis

scientific article

Identification and characterisation of hypomethylated DNA loci controlling quantitative resistance in

scientific article published on 04 January 2019

Improved detection and annotation of transposable elements in sequenced genomes using multiple reference sequence sets

scientific article published on 14 March 2008

Integrative epigenomic mapping defines four main chromatin states in Arabidopsis

scientific article

Mapping the epigenetic basis of complex traits.

scientific article published on 6 February 2014

MeDIP-HMM: genome-wide identification of distinct DNA methylation states from high-density tiling arrays ⬇️

scientific article published on September 17, 2012

Mild drought in the vegetative stage induces phenotypic, gene expression and DNA methylation plasticity in Arabidopsis but no transgenerational effects

scientific article published on 13 March 2020

Mild drought induces phenotypic and DNA methylation plasticity but no transgenerational effects in Arabidopsis

scholarly article published 16 July 2018

Misregulation of AUXIN RESPONSE FACTOR 8 underlies the developmental abnormalities caused by three distinct viral silencing suppressors in Arabidopsis

scientific article

Mobilization of a plant transposon by expression of the transposon-encoded anti-silencing factor

scientific article published on 30 July 2013

Molecular, genetic and evolutionary analysis of a paracentric inversion in Arabidopsis thaliana

scientific article published on 20 July 2016

Natural occurring epialleles determine vitamin E accumulation in tomato fruits

scientific article published on 26 June 2014

Nuclear retention of the transcription factor NLP7 orchestrates the early response to nitrate in plants.

scientific article published in January 2013

Plant Transgenerational Epigenetics

scientific article

Polycomb repressive complex 2 controls the embryo-to-seedling phase transition.

scientific article

Profiling DNA methylation patterns using genomic tiling microarrays.

scientific article

Profiling histone modification patterns in plants using genomic tiling microarrays

scientific article published on 01 March 2005

Profiling spatial enrichment of chromatin marks suggests an additional epigenomic dimension in gene regulation

article

Promoter DNA hypermethylation and gene repression in undifferentiated Arabidopsis cells

scientific article

Quantitative resistance to clubroot infection mediated by transgenerational epigenetic variation in Arabidopsis

scientific article published on 30 November 2018

Reconstructing de novo silencing of an active plant retrotransposon.

scientific article published on 14 July 2013

Relaxed purifying selection in autopolyploids drives transposable element over-accumulation which provides variants for local adaptation

scientific article published on 20 December 2019

Role of transposable elements in heterochromatin and epigenetic control

scientific article (publication date: 22 July 2004)

TE-Tracker: systematic identification of transposition events through whole-genome resequencing

scientific article

The Arabidopsis miR472-RDR6 silencing pathway modulates PAMP- and effector-triggered immunity through the post-transcriptional control of disease resistance genes

scientific article published on 16 January 2014

The Arabidopsis thaliana mobilome and its impact at the species level

scientific article

The development of an Arabidopsis model system for genome-wide analysis of polyploidy effects

scientific article

The impact of transposable elements on tomato diversity

scientific article published on 13 August 2020

Transposition favors the generation of large effect mutations that may facilitate rapid adaption

scientific article published on 31 July 2019

Transposon accumulation lines uncover histone H2A.Z-driven integration bias towards environmentally responsive genes

article

Understanding mechanisms of novel gene expression in polyploids

scientific article

Variation in crossing-over rates across chromosome 4 of Arabidopsis thaliana reveals the presence of meiotic recombination "hot spots".

scientific article

Versatile gene-specific sequence tags for Arabidopsis functional genomics: transcript profiling and reverse genetics applications

scientific article published on October 2004

ncPRO-seq: a tool for annotation and profiling of ncRNAs in sRNA-seq data

scientific article

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