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List of works by Mark Dopson

A Novel Inorganic Sulfur Compound Metabolizing -Like Population Is Suggested to Mediate Extracellular Electron Transfer

scientific article published on 05 December 2018

Acidithiobacillus ferrivorans SS3 presents little RNA transcript response related to cold stress during growth at 8 °C suggesting it is a eurypsychrophile.

scientific article published on 25 October 2016

Anaerobic Sulfur Metabolism Coupled to Dissimilatory Iron Reduction in the Extremophile Acidithiobacillus ferrooxidans ⬇️

scientific article published on January 25, 2013

Analysis of differential protein expression during growth states of Ferroplasma strains and insights into electron transport for iron oxidation

scientific article

Architecture and gene repertoire of the flexible genome of the extreme acidophile Acidithiobacillus caldus.

scientific article

Automated Microscopic Analysis of Metal Sulfide Colonization by Acidophilic Microorganisms

article

Bacterial oxidation of ferrous iron at low temperatures

scientific article published on 01 August 2007

Biofilm development in the extremely acidophilic archaeon 'Ferroplasma acidarmanus' Fer1.

scientific article published on 12 September 2010

Bioleaching in brackish waters--effect of chloride ions on the acidophile population and proteomes of model species.

scientific article

Bioleaching of sulfidic tailing samples with a novel, vacuum-positive pressure driven bioreactor

scientific article published in December 2005

Characterization of Ferroplasma isolates and Ferroplasma acidarmanus sp. nov., extreme acidophiles from acid mine drainage and industrial bioleaching environments

scientific article (publication date: April 2004)

Chemical and microbiological evaluation of novel chemical treatment methods for acid sulfate soils

scientific article published on 26 December 2017

Climate change-related warming reduces thermal sensitivity and modifies metabolic activity of coastal benthic bacterial communities

scientific article published on 28 March 2023

Comparison of boreal acid sulfate soil microbial communities in oxidative and reductive environments

scientific article published on 03 July 2019

Connectivity to the surface determines diversity patterns in subsurface aquifers of the Fennoscandian shield

scientific article

Connectivity to the surface determines diversity patterns in subsurface aquifers of the Fennoscandian shield

scientific article published on October 2016

Correction for Bellenberg et al., "Automated Microscopic Analysis of Metal Sulfide Colonization by Acidophilic Microorganisms"

scientific article published on 21 January 2020

Deciphering indigenous bacteria in compacted bentonite through a novel and efficient DNA extraction method: Insights into biogeochemical processes within the Deep Geological Disposal of nuclear waste concept

scientific article published on 16 November 2020

Deep neural networks outperform human expert's capacity in characterizing bioleaching bacterial biofilm composition

article

Depth and Dissolved Organic Carbon Shape Microbial Communities in Surface Influenced but Not Ancient Saline Terrestrial Aquifers

article

Diatoms dominate the eukaryotic metatranscriptome during spring in coastal 'dead zone' sediments.

scientific article published in October 2017

Diffusible signal factor signaling controls bioleaching activity and niche protection in the acidophilic, mineral-oxidizing leptospirilli

scientific article published on 11 August 2021

Distinct Coastal Microbiome Populations Associated With Autochthonous- and Allochthonous-Like Dissolved Organic Matter

scientific article published on 07 November 2019

Draft genome of the psychrotolerant acidophile Acidithiobacillus ferrivorans SS3.

scientific article published on 24 June 2011

Draft genome sequence of the extremely acidophilic bacterium Acidithiobacillus caldus ATCC 51756 reveals metabolic versatility in the genus Acidithiobacillus

scientific article

Draft genome sequence of the extremely acidophilic biomining bacterium Acidithiobacillus thiooxidans ATCC 19377 provides insights into the evolution of the Acidithiobacillus genus

scientific article

Effect of CO Concentration on Uptake and Assimilation of Inorganic Carbon in the Extreme Acidophile

scientific article published in 2019

Effect of chloride on ferrous iron oxidation by a Leptospirillum ferriphilum-dominated chemostat culture

scientific article published on 01 June 2010

Effect of sulfide removal on sulfate reduction at pH 5 in a hydrogen fed gas-lift bioreactor.

scientific article published in November 2008

Electricity generation from an inorganic sulfur compound containing mining wastewater by acidophilic microorganisms

scientific article

Evolution of Predicted Acid Resistance Mechanisms in the Extremely Acidophilic Leptospirillum Genus

scientific article published on 03 April 2020

Expression and activity of the Calvin-Benson-Bassham cycle transcriptional regulator CbbR from Acidithiobacillus ferrooxidans in Ralstonia eutropha

scientific article

Extreme arsenic resistance by the acidophilic archaeon 'Ferroplasma acidarmanus' Fer1.

scientific article

Extreme zinc tolerance in acidophilic microorganisms from the bacterial and archaeal domains.

scientific article published on 10 November 2012

First use of two-dimensional polyacrylamide gel electrophoresis to determine phylogenetic relationships

scientific article published on 01 September 2004

Gallionella and Sulfuricella populations are dominant during the transition of boreal potential to actual acid sulfate soils

scholarly article

Gene Identification and Substrate Regulation Provide Insights into Sulfur Accumulation during Bioleaching with the Psychrotolerant Acidophile Acidithiobacillus ferrivorans ⬇️

scientific article published on November 26, 2012

Genetic variability of psychrotolerant Acidithiobacillus ferrivorans revealed by (meta)genomic analysis

scientific article

Growth in sulfidic mineral environments: metal resistance mechanisms in acidophilic micro-organisms

scientific article

Haloalkaliphilic microorganisms assist sulfide removal in a microbial electrolysis cell

scientific article published on 20 September 2018

Identification and Unusual Properties of the Master Regulator FNR in the Extreme Acidophile Acidithiobacillus ferrooxidans

scientific article published on 19 July 2019

Immobilization of sulfate and thiosulfate-reducing biomass on sand under haloalkaline conditions

scientific article published on 22 July 2020

Impact of anoxic conditions, uranium(VI) and organic phosphate substrate on the biogeochemical potential of the indigenous bacterial community of bentonite

scientific article published in 2022

Impact of mitigation strategies on acid sulfate soil chemistry and microbial community.

scientific article

Indirect DNA extraction method suitable for acidic soil with high clay content

scientific article published on 22 February 2018

Interplay between eutrophication and climate warming on bacterial communities in coastal sediments differs depending on water depth and oxygen history

scientific article published in 2021

Investigation of viable taxa in the deep terrestrial biosphere suggests high rates of nutrient recycling.

scientific article published in August 2018

Low temperature removal of inorganic sulfur compounds from mining process waters ⬇️

scientific article published on January 28, 2011

Low temperature, autotrophic microbial denitrification using thiosulfate or thiocyanate as electron donor.

scientific article

Metagenomes and metatranscriptomes from boreal potential and actual acid sulfate soil materials

scientific article published on 16 October 2019

Metagenomic analysis reveals adaptations to a cold-adapted lifestyle in a low-temperature acid mine drainage stream

scientific article published on 27 January 2015

Metal resistance in acidophilic microorganisms and its significance for biotechnologies

scientific article published on 08 August 2014

Metal resistance or tolerance? Acidophiles confront high metal loads via both abiotic and biotic mechanisms.

scientific article published on 09 April 2014

Metatranscriptomes Reveal That All Three Domains of Life Are Active but Are Dominated by Bacteria in the Fennoscandian Crystalline Granitic Continental Deep Biosphere

scientific article published on 20 November 2018

Microbial Community and Metabolic Activity in Thiocyanate Degrading Low Temperature Microbial Fuel Cells

scientific article published on 28 September 2018

Microbial community potentially responsible for acid and metal release from an Ostrobothnian acid sulfate soil ⬇️

scientific article published on February 26, 2013

Microbial metagenomes from three aquifers in the Fennoscandian shield terrestrial deep biosphere reveal metabolic partitioning among populations

scientific article published on 20 October 2015

Mineral and iron oxidation at low temperatures by pure and mixed cultures of acidophilic microorganisms

article

Molecular insight into extreme copper resistance in the extremophilic archaeon 'Ferroplasma acidarmanus' Fer1.

scientific article published in August 2005

Multi-omics reveal the lifestyle of the acidophilic, mineral-oxidizing model species Leptospirillum ferriphilum(T).

scientific article

Multiple Osmotic Stress Responses in Acidihalobacter prosperus Result in Tolerance to Chloride Ions.

scientific article

Oxidation of elemental sulfur, tetrathionate and ferrous iron by the psychrotolerant Acidithiobacillus strain SS3

scientific article published on 24 September 2009

Oxygenation of Hypoxic Coastal Baltic Sea Sediments Impacts on Chemistry, Microbial Community Composition, and Metabolism

scientific article published on 12 December 2017

Oxygenation of anoxic sediments triggers hatching of zooplankton eggs. ⬇️

scientific article published in October 2015

Population dynamics of a single-stage sulfidogenic bioreactor treating synthetic zinc-containing waste streams

scientific article published on 27 March 2009

Possibilities for extremophilic microorganisms in microbial electrochemical systems

scientific article

Potential for hydrogen-oxidizing chemolithoautotrophic and diazotrophic populations to initiate biofilm formation in oligotrophic, deep terrestrial subsurface waters

scientific article published on 23 March 2017

RNA transcript sequencing reveals inorganic sulfur compound oxidation pathways in the acidophile Acidithiobacillus ferrivorans.

scientific article published on 07 March 2016

Regulation of a novel Acidithiobacillus caldus gene cluster involved in metabolism of reduced inorganic sulfur compounds

scientific article

Response of Acidithiobacillus caldus toward suboptimal pH conditions ⬇️

scientific article published on May 28, 2013

Response of marine bacterioplankton pH homeostasis gene expression to elevated CO2

article

Reverse engineering directed gene regulatory networks from transcriptomics and proteomics data of biomining bacterial communities with approximate Bayesian computation and steady-state signalling simulations

scientific article published on 21 January 2020

Selection and Application of Sulfide Oxidizing Microorganisms Able to Withstand Thiols in Gas Biodesulfurization Systems

scientific article published on 9 November 2016

Selective recovery of nickel over iron from a nickel-iron solution using microbial sulfate reduction in a gas-lift bioreactor

scientific article published on 30 November 2008

Shifts in coastal sediment oxygenation cause pronounced changes in microbial community composition and associated metabolism.

scientific article published on 09 August 2017

Silicate mineral dissolution during heap bioleaching.

scientific article published in March 2008

Spring and Late Summer Phytoplankton Biomass Impact on the Coastal Sediment Microbial Community Structure

article

Statistical Analysis of Community RNA Transcripts between Organic Carbon and Geogas-Fed Continental Deep Biosphere Groundwaters

scientific article published on 13 August 2019

Sulfate reduction at pH 4.0 for treatment of process and wastewaters.

scientific article published in July 2010

Sulfate reduction at pH 5 in a high-rate membrane bioreactor: reactor performance and microbial community analyses.

scientific article published in July 2009

Sulfur Metabolism in the Extreme Acidophile Acidithiobacillus Caldus ⬇️

scientific article published on February 10, 2011

Syngas as Electron Donor for Sulfate and Thiosulfate Reducing Haloalkaliphilic Microorganisms in a Gas-Lift Bioreactor

scientific article published on 22 September 2020

Systems Biology of Acidophile Biofilms for Efficient Metal Extraction

Systems biology of acidophile biofilms for efficient metal extraction

scientific article published on 07 July 2020

The Fennoscandian Shield deep terrestrial virosphere suggests slow motion 'boom and burst' cycles

scientific article published on 08 March 2021

Towards Bioleaching of a Vanadium Containing Magnetite for Metal Recovery

scientific article published on 30 June 2021

Towards determining details of anaerobic growth coupled to ferric iron reduction by the acidophilic archaeon 'Ferroplasma acidarmanus' Fer1.

scientific article published on 18 October 2006

Transcriptomic analysis reveals how a lack of potassium ions increases Sulfolobus acidocaldarius sensitivity to pH changes.

scientific article published on 26 May 2016

Unprecedented 34 S-enrichment of pyrite formed following microbial sulfate reduction in fractured crystalline rocks

scientific article published on 27 June 2018

Weak Iron Oxidation by Maintains a Favorable Redox Potential for Chalcopyrite Bioleaching

scientific article published on 12 December 2018

Weakened resilience of benthic microbial communities in the face of climate change

scientific article published in 2022

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