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List of works by Silvana Gaudieri

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Predisposition to abacavir hypersensitivity conferred by HLA-B*5701 and a haplotypic Hsp70-Hom variant

scholarly article
Sequential bottlenecks drive viral evolution in early acute hepatitis C virus infection

scientific article
Population level analysis of human immunodeficiency virus type 1 hypermutation and its relationship with APOBEC3G and vif genetic variation

scientific article
Skewed association of polyfunctional antigen-specific CD8 T cell populations with HLA-B genotype

scholarly article
Evidence of Viral Adaptation to HLA Class I-Restricted Immune Pressure in Chronic Hepatitis C Virus Infection

scientific article
IL28B, HLA-C, and KIR variants additively predict response to therapy in chronic hepatitis C virus infection in a European Cohort: a cross-sectional study

scientific article
Hepatitis C virus drug resistance and immune-driven adaptations: relevance to new antiviral therapy

scientific article
Comparative genomic analysis, diversity and evolution of two KIR haplotypes A and B.

scientific article published in June 2004
Host genetic determinants of spontaneous hepatitis C clearance

scientific article
Molecular footprints reveal the impact of the protective HLA-A*03 allele in hepatitis C virus infection

scientific article
Tracking Virus-Specific CD4+ T Cells during and after Acute Hepatitis C Virus Infection

scientific article (publication date: 25 July 2007)
Mapping the landscape of host-pathogen coevolution: HLA class I binding and its relationship with evolutionary conservation in human and viral proteins.

scientific article
Divergent adaptation of hepatitis C virus genotypes 1 and 3 to human leukocyte antigen-restricted immune pressure

scientific article
A systematic review of T-cell epitopes in hepatitis B virus: identification, genotypic variation and relevance to antiviral therapeutics.

scientific article published on January 2008
Effect of immune pressure on hepatitis C virus evolution: insights from a single-source outbreak

scientific article
Mitochondrial DNA cytochrome oxidase I gene: potential for distinction between immature stages of some forensically important fly species (Diptera) in western Australia.

scientific article published in January 2003
A global study of forensically significant calliphorids: implications for identification.

scientific article
Adaptive interactions between HLA and HIV-1: highly divergent selection imposed by HLA class I molecules with common supertype motifs

scientific article
Phenome-wide scanning identifies multiple diseases and disease severity phenotypes associated with HLA variants.

scientific article published on May 2017
Abacavir-reactive memory T cells are present in drug naïve individuals

scientific article
Analysis of FOXP3+ regulatory T cells that display apparent viral antigen specificity during chronic hepatitis C virus infection

scientific article
Extensive HLA-driven viral diversity following a narrow-source HIV-1 outbreak in rural China

scientific article published on 11 May 2011
In polymorphic genomic regions indels cluster with nucleotide polymorphism: Quantum Genomics

scientific article published in July 2003
Associations between KIR epitope combinations expressed by HLA-B/-C haplotypes found in an HIV-1 infected study population may influence NK mediated immune responses

scientific article
Viral adaptation to host immune responses occurs in chronic hepatitis B virus (HBV) infection, and adaptation is greatest in HBV e antigen-negative disease.

scientific article published on 9 November 2011
Naturally occurring dominant drug resistance mutations occur infrequently in the setting of recently acquired hepatitis C.

scientific article
The broad assessment of HCV genotypes 1 and 3 antigenic targets reveals limited cross-reactivity with implications for vaccine design

scientific article
HLA-Bw4 homozygosity is associated with an impaired CD4 T cell recovery after initiation of antiretroviral therapy

scientific article published in June 2008
Transmitted/Founder Viruses Rapidly Escape from CD8+ T Cell Responses in Acute Hepatitis C Virus Infection

scientific article published on 4 March 2015
Cellular immune responses to HCV core increase and HCV RNA levels decrease during successful antiretroviral therapy

scientific article published on 26 July 2010
Full-Length Characterization of Hepatitis C Virus Subtype 3a Reveals Novel Hypervariable Regions under Positive Selection during Acute Infection

scientific article
Pharmacogenetics of antiretroviral therapy: genetic variation of response and toxicity

scientific article published in September 2004
Constrained pattern of viral evolution in acute and early HCV infection limits viral plasticity

scientific article
Molecular characterization of the Pb recombination hotspot in the mouse major histocompatibility complex class II region

scientific article published on August 2002
Genetic variations in IL28B and allergic disease in children

scientific article
HLA-B*27 subtype specificity determines targeting and viral evolution of a hepatitis C virus-specific CD8+ T cell epitope

scientific article published on 23 August 2013
Host genetics and viral infections: immunology taught by viruses, virology taught by the immune system

scientific article published on 13 June 2006
Pharmacogenetics: a practical role in predicting antiretroviral drug toxicity?

scientific article
Cytomegalovirus (CMV) Epitope-Specific CD4(+) T Cells Are Inflated in HIV(+) CMV(+) Subjects

scientific article published on 2 October 2017
Impact of host genetics on HIV disease progression and treatment: new conflicts on an ancient battleground

scientific article published in June 2004
Helicobacter pylori adaptation in vivo in response to a high-salt diet

scientific article
Length variation of CAG/CAA triplet repeats in 50 genes among 16 inbred mouse strains

scientific article
Influence of HIV and HCV on T cell antigen presentation and challenges in the development of vaccines

scientific article published on October 13, 2014
Comparison of HLA allelic imputation programs.

scientific article
Escape of Hepatitis C Virus from Epitope I Neutralization Increases Sensitivity of Other Neutralization Epitopes.

scientific article published on 21 February 2018
The impact of visa status and Medicare eligibility on people diagnosed with HIV in Western Australia: a qualitative report

scientific article published in November 2012
Low current and nadir CD4+ T-cell counts are associated with higher hepatitis C virus RNA levels in the Swiss HIV cohort study.

scientific article published on January 2008
Amino acid patterns within short consensus repeats define conserved duplicons shared by genes of the RCA complex

scientific article published on August 2004
Primer ID ultra-deep sequencing reveals dynamics of drug resistance-associated variants in breakthrough hepatitis C viruses: relevance to treatment outcome and resistance screening.

scientific article published on 24 May 2016
Evidence of CD4+ T cell-mediated immune pressure on the Hepatitis C virus genome.

scientific article

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