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List of works by Johannes P C Vissers

A probabilistic framework for peptide and protein quantification from data-dependent and data-independent LC-MS proteomics experiments

scientific article

A proteome approach defines protective functions of tobacco leaf trichomes

scientific article published in July 2005

Absolute quantification of proteins by LCMSE: a virtue of parallel MS acquisition

scientific article

Alignment and statistical difference analysis of complex peptide data sets generated by multidimensional LC-MS.

scientific article

Asymmetric proteome equalization of the skeletal muscle proteome using a combinatorial hexapeptide library

scientific article (publication date: 2011)

Biomarkers for lysosomal storage disorders: identification and application as exemplified by chitotriosidase in Gaucher disease

scientific article

Database searching and accounting of multiplexed precursor and product ion spectra from the data independent analysis of simple and complex peptide mixtures

scientific article

Design and application of a data-independent precursor and product ion repository

scientific article

Gaucher disease: a model disorder for biomarker discovery

scientific article published on August 2009

Label-free LC-MSe in tissue and serum reveals protein networks underlying differences between benign and malignant serous ovarian tumors.

scientific article

Plasma biomarker identification in S-adenosylhomocysteine hydrolase deficiency.

scientific article

Protein markers for insulin-producing beta cells with higher glucose sensitivity

scientific article (publication date: 6 December 2010)

Qualitative and Quantitative Multiplexed Proteomic Analysis of Complex Yeast Protein Fractions That Modulate the Assembly of the Yeast Prion Sup35p ⬇️

scientific article published on September 13, 2011

Qualitative and quantitative proteomic profiling of cripto(-/-) embryonic stem cells by means of accurate mass LC-MS analysis

scientific article

Scanning Quadrupole Data-Independent Acquisition, Part A: Qualitative and Quantitative Characterization.

scientific article published on 13 September 2017

Scanning Quadrupole Data-Independent Acquisition, Part B: Application to the Analysis of the Calcineurin-Interacting Proteins during Treatment of Aspergillus fumigatus with Azole and Echinocandin Antifungal Drugs

scientific article published on 18 December 2017

Simulating and validating proteomics data and search results ⬇️

scientific article published on February 7, 2011

The detection, correlation, and comparison of peptide precursor and product ions from data independent LC-MS with data dependant LC-MS/MS.

scientific article

Towards a proteome signature for invasive ductal breast carcinoma derived from label-free nanoscale LC-MS protein expression profiling of tumorous and glandular tissue

scientific article

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