List of works - Kirk E. Lohmueller

A community-maintained standard library of population genetic models

scientific article published on 23 June 2020

A comprehensive review of genetic association studies

scientific article

A model-based approach for identifying signatures of ancient balancing selection in genetic data

scientific article (publication date: August 2014)

A simple genetic architecture underlies morphological variation in dogs

scientific article

Amerindian-specific regions under positive selection harbour new lipid variants in Latinos

scientific article

An Aboriginal Australian genome reveals separate human dispersals into Asia

scientific article (publication date: 7 October 2011)

An assessment of the information content of likelihood ratios derived from complex mixtures

scientific article published on 19 January 2016

Analysis of allelic drop-out using the Identifiler(®) and PowerPlex(®) 16 forensic STR typing systems

scientific article published on 18 April 2014

Analysis of genetic variation in Ashkenazi Jews by high density SNP genotyping

scientific article

Aquatic Adaptation and Depleted Diversity: A Deep Dive into the Genomes of the Sea Otter and Giant Otter

scientific article published on 01 December 2019

Assessing the evolutionary impact of amino acid mutations in the human genome

scientific article

Bottlenecks and selective sweeps during domestication have increased deleterious genetic variation in dogs

scientific article

Calculating the weight of evidence in low-template forensic DNA casework.

scientific article published on 19 October 2012

Comparison of Single Genome and Allele Frequency Data Reveals Discordant Demographic Histories.

scientific article published on 11 September 2017

Complex patterns of sex-biased demography in canines

scientific article published on 01 May 2019

Deleterious variation shapes the genomic landscape of introgression

article

Detecting ancient admixture and estimating demographic parameters in multiple human populations

scientific article

Detecting directional selection in the presence of recent admixture in African-Americans

scientific article

Determining the Effect of Natural Selection on Linked Neutral Divergence across Species

scientific article

Determining the factors driving selective effects of new nonsynonymous mutations

scientific article

Estimation of allele frequency and association mapping using next-generation sequencing data

scientific article

Evolution. On the origin of Peter Rabbit.

scientific article

Evolutionary History, Selective Sweeps, and Deleterious Variation in the Dog

scientific article (publication date: November 2016)

Fitting the Balding-Nichols model to forensic databases

scientific article

Gene expression drives the evolution of dominance

scientific article published in Nature Communications

Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication

scientific article

Genomic Flatlining in the Endangered Island Fox.

scientific article

Genomic analyses reveal range‐wide devastation of sea otter populations

scientific article published in 2022

Genomic divergence across ecological gradients in the Central African rainforest songbird (Andropadus virens).

scientific article published on 28 July 2017

Genomic history of the Sardinian population

scientific article published on 17 September 2018

Genomic signatures of extensive inbreeding in Isle Royale wolves, a population on the threshold of extinction

scientific article published on 29 May 2019

Global distribution of genomic diversity underscores rich complex history of continental human populations

scientific article

Graydon et al. provide no new evidence that forensic STR loci are functional

scientific article published on 02 October 2009

Greater strength of selection and higher proportion of beneficial amino acid changing mutations in humans compared to mice and Drosophila melanogaster

scientific article published on 18 November 2020

Growth factor gene IGF1 is associated with bill size in the black-bellied seedcracker Pyrenestes ostrinus

scientific article published in Nature Communications

Height-reducing variants and selection for short stature in Sardinia

scientific article

High-quality genome and methylomes illustrate features underlying evolutionary success of oaks

scientific article published on 19 April 2022

Identification and characterization of constrained non-exonic bases lacking predictive epigenomic and transcription factor binding annotations

scientific article published on 02 December 2020

Inference of the Distribution of Selection Coefficients for New Nonsynonymous Mutations Using Large Samples

scientific article

Lab Retriever: a software tool for calculating likelihood ratios incorporating a probability of drop-out for forensic DNA profiles

scientific article published on 18 September 2015

Leveraging ancestry to improve causal variant identification in exome sequencing for monogenic disorders

scientific article published on 22 April 2015

Long-term Small Population Size, Deleterious Variation, and Altitude Adaptation in the Ethiopian Wolf, a Severely Endangered Canid

scientific article published on 4 January 2023

MaLAdapt Reveals Novel Targets of Adaptive Introgression From Neanderthals and Denisovans in Worldwide Human Populations

scientific article published in 2023

Meta-analysis of genetic association studies supports a contribution of common variants to susceptibility to common disease

scientific article

Methods for high-density admixture mapping of disease genes

scientific article

Methods for human demographic inference using haplotype patterns from genomewide single-nucleotide polymorphism data

scientific article

Natural Selection and Origin of a Melanistic Allele in North American Gray Wolves.

scientific article published in May 2018

Natural selection affects multiple aspects of genetic variation at putatively neutral sites across the human genome.

scientific article

Natural selection reduced diversity on human y chromosomes

scientific article published on 09 January 2014

Negative selection on complex traits limits phenotype prediction accuracy between populations

scientific article published in 2021

PReFerSim: fast simulation of demography and selection under the Poisson Random Field model

scientific article published on 19 July 2016

Patterns of de novo tandem repeat mutations and their role in autism

scientific article published on 13 January 2021

Population genetic models of GERP scores suggest pervasive turnover of constrained sites across mammalian evolution

scientific article published on 29 May 2020

Proportionally more deleterious genetic variation in European than in African populations.

scientific article

Purging of Strongly Deleterious Mutations Explains Long-Term Persistence and Absence of Inbreeding Depression in Island Foxes

scientific article published on 25 October 2018

RADseq data reveal ancient, but not pervasive, introgression between Californian tree and scrub oak species (Quercus sect. Quercus: Fagaceae)

scientific article published on 12 October 2018

Selection and reduced population size cannot explain higher amounts of Neandertal ancestry in East Asian than in European human populations

scientific article

Sex-averaged recombination and mutation rates on the X chromosome: a comment on Labuda et al.

scientific article published on June 2010

Ten simple rules for giving an effective academic job talk

scientific article published on 25 July 2019

Testing whether stutter and low-level DNA peaks are additive

scientific article published on 24 September 2019

The Effect of an Extreme and Prolonged Population Bottleneck on Patterns of Deleterious Variation: Insights from the Greenlandic Inuit

scientific article published on 30 November 2016

The Impact of Recessive Deleterious Variation on Signals of Adaptive Introgression in Human Populations

scientific article published on 02 June 2020

The critically endangered vaquita is not doomed to extinction by inbreeding depression

scientific article published in 2022

The distribution of deleterious genetic variation in human populations

scientific article

The effect of recent admixture on inference of ancient human population history

scientific article

The impact of identity by descent on fitness and disease in dogs

scientific article published on 20 April 2021

The impact of identity-by-descent on fitness and disease in natural and domesticated Canid populations

scientific article published on 17 November 2020

The impact of population demography and selection on the genetic architecture of complex traits

scientific article

Understanding the Hidden Complexity of Latin American Population Isolates

Validation of probabilistic genotyping software for use in forensic DNA casework: Definitions and illustrations

scientific article published on 29 December 2015

Variants associated with common disease are not unusually differentiated in frequency across populations

scientific article

Whole-Exome Sequencing of 2,000 Danish Individuals and the Role of Rare Coding Variants in Type 2 Diabetes

Whole-exome sequencing of 2,000 Danish individuals and the role of rare coding variants in type 2 diabetes

scientific article

List of works by Kirk E. Lohmueller

A community-maintained standard library of population genetic models

A comprehensive review of genetic association studies

A model-based approach for identifying signatures of ancient balancing selection in genetic data

A simple genetic architecture underlies morphological variation in dogs

Amerindian-specific regions under positive selection harbour new lipid variants in Latinos

An Aboriginal Australian genome reveals separate human dispersals into Asia

An assessment of the information content of likelihood ratios derived from complex mixtures

Analysis of allelic drop-out using the Identifiler(®) and PowerPlex(®) 16 forensic STR typing systems

Analysis of genetic variation in Ashkenazi Jews by high density SNP genotyping

Aquatic Adaptation and Depleted Diversity: A Deep Dive into the Genomes of the Sea Otter and Giant Otter

Assessing the evolutionary impact of amino acid mutations in the human genome

Bottlenecks and selective sweeps during domestication have increased deleterious genetic variation in dogs

Calculating the weight of evidence in low-template forensic DNA casework.

Comparison of Single Genome and Allele Frequency Data Reveals Discordant Demographic Histories.

Complex patterns of sex-biased demography in canines

Deleterious variation shapes the genomic landscape of introgression

Detecting ancient admixture and estimating demographic parameters in multiple human populations

Detecting directional selection in the presence of recent admixture in African-Americans

Determining the Effect of Natural Selection on Linked Neutral Divergence across Species

Determining the factors driving selective effects of new nonsynonymous mutations

Estimation of allele frequency and association mapping using next-generation sequencing data

Evolution. On the origin of Peter Rabbit.

Evolutionary History, Selective Sweeps, and Deleterious Variation in the Dog

Fitting the Balding-Nichols model to forensic databases

Gene expression drives the evolution of dominance

Genome-wide SNP and haplotype analyses reveal a rich history underlying dog domestication

Genomic Flatlining in the Endangered Island Fox.

Genomic analyses reveal range‐wide devastation of sea otter populations

Genomic divergence across ecological gradients in the Central African rainforest songbird (Andropadus virens).

Genomic history of the Sardinian population

Genomic signatures of extensive inbreeding in Isle Royale wolves, a population on the threshold of extinction

Global distribution of genomic diversity underscores rich complex history of continental human populations

Graydon et al. provide no new evidence that forensic STR loci are functional

Greater strength of selection and higher proportion of beneficial amino acid changing mutations in humans compared to mice and Drosophila melanogaster

Growth factor gene IGF1 is associated with bill size in the black-bellied seedcracker Pyrenestes ostrinus

Height-reducing variants and selection for short stature in Sardinia

High-quality genome and methylomes illustrate features underlying evolutionary success of oaks

Identification and characterization of constrained non-exonic bases lacking predictive epigenomic and transcription factor binding annotations

Inference of the Distribution of Selection Coefficients for New Nonsynonymous Mutations Using Large Samples

Lab Retriever: a software tool for calculating likelihood ratios incorporating a probability of drop-out for forensic DNA profiles

Leveraging ancestry to improve causal variant identification in exome sequencing for monogenic disorders

Long-term Small Population Size, Deleterious Variation, and Altitude Adaptation in the Ethiopian Wolf, a Severely Endangered Canid

MaLAdapt Reveals Novel Targets of Adaptive Introgression From Neanderthals and Denisovans in Worldwide Human Populations

Meta-analysis of genetic association studies supports a contribution of common variants to susceptibility to common disease

Methods for high-density admixture mapping of disease genes

Methods for human demographic inference using haplotype patterns from genomewide single-nucleotide polymorphism data

Natural Selection and Origin of a Melanistic Allele in North American Gray Wolves.

Natural selection affects multiple aspects of genetic variation at putatively neutral sites across the human genome.

Natural selection reduced diversity on human y chromosomes

Negative selection on complex traits limits phenotype prediction accuracy between populations

PReFerSim: fast simulation of demography and selection under the Poisson Random Field model

Patterns of de novo tandem repeat mutations and their role in autism

Population genetic models of GERP scores suggest pervasive turnover of constrained sites across mammalian evolution

Proportionally more deleterious genetic variation in European than in African populations.

Purging of Strongly Deleterious Mutations Explains Long-Term Persistence and Absence of Inbreeding Depression in Island Foxes

RADseq data reveal ancient, but not pervasive, introgression between Californian tree and scrub oak species (Quercus sect. Quercus: Fagaceae)

Selection and reduced population size cannot explain higher amounts of Neandertal ancestry in East Asian than in European human populations

Sex-averaged recombination and mutation rates on the X chromosome: a comment on Labuda et al.

Ten simple rules for giving an effective academic job talk

Testing whether stutter and low-level DNA peaks are additive

The Effect of an Extreme and Prolonged Population Bottleneck on Patterns of Deleterious Variation: Insights from the Greenlandic Inuit

The Impact of Recessive Deleterious Variation on Signals of Adaptive Introgression in Human Populations

The critically endangered vaquita is not doomed to extinction by inbreeding depression

The distribution of deleterious genetic variation in human populations

The effect of recent admixture on inference of ancient human population history

The impact of identity by descent on fitness and disease in dogs

The impact of identity-by-descent on fitness and disease in natural and domesticated Canid populations

The impact of population demography and selection on the genetic architecture of complex traits

Understanding the Hidden Complexity of Latin American Population Isolates

Validation of probabilistic genotyping software for use in forensic DNA casework: Definitions and illustrations

Variants associated with common disease are not unusually differentiated in frequency across populations

Whole-Exome Sequencing of 2,000 Danish Individuals and the Role of Rare Coding Variants in Type 2 Diabetes

Whole-exome sequencing of 2,000 Danish individuals and the role of rare coding variants in type 2 diabetes