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List of works by Annika Brinkmann

A cross-sectional screening by next-generation sequencing reveals Rickettsia, Coxiella, Francisella, Borrelia, Babesia, Theileria and Hemolivia species in ticks from Anatolia

scholarly article published by Koray Ergünay in 2019

A metagenomic survey identifies Tamdy orthonairovirus as well as divergent phlebo-, rhabdo-, chu- and flavi-like viruses in Anatolia, Turkey

scientific article published in July 2018

A novel genetic lineage of Tula orthohantavirus in Altai voles (Microtus obscurus) from Turkey

scientific article published on 19 November 2018

A novel rhabdovirus, related to Merida virus, in field-collected mosquitoes from Anatolia and Thrace

scientific article

AmpliCoV: Rapid Whole-Genome Sequencing Using Multiplex PCR Amplification and Real-Time Oxford Nanopore MinION Sequencing Enables Rapid Variant Identification of SARS-CoV-2

scientific article published on 01 July 2021

Arboviral screening of invasive Aedes species in northeastern Turkey: West Nile virus circulation and detection of insect-only viruses. ⬇️

scientific article published on 6 May 2019

Co-circulation of West Nile virus and distinct insect-specific flaviviruses in Turkey.

scientific article published on 20 March 2017

Description of Sarcocystis scandentiborneensis sp. nov. from treeshrews (Tupaia minor, T. tana) in northern Borneo with annotations on the utility of COI and 18S rDNA sequences for species delineation

scientific article published on 08 July 2020

Development and preliminary evaluation of a multiplexed amplification and next generation sequencing method for viral hemorrhagic fever diagnostics

scientific article published on 20 November 2017

Effects of Regular Kefir Consumption on Gut Microbiota in Patients with Metabolic Syndrome: A Parallel-Group, Randomized, Controlled Study

scientific article published on 04 September 2019

First detection of bat-borne Issyk-Kul virus in Europe

scientific article published on 24 December 2020

Generic amplification and next generation sequencing reveal Crimean-Congo hemorrhagic fever virus AP92-like strain and distinct tick phleboviruses in Anatolia, Turkey.

scientific article

Genomic Sequencing and Analysis of a Novel Human Cowpox Virus With Mosaic Sequences From North America and Old World Orthopoxvirus

scientific article published on 03 May 2022

Isolation and characterization of three mammalian orthoreoviruses from European bats

scientific article

Isolation and genomic characterization of Culex theileri flaviviruses in field-collected mosquitoes from Turkey

scientific article

Metagenomics-Based Proficiency Test of Smoked Salmon Spiked with a Mock Community

scientific article published on 25 November 2020

Multiple orthonairoviruses including Crimean-Congo hemorrhagic fever virus, Tamdy virus and the novel Meram virus in Anatolia

scientific article published on 11 May 2020

Novel Tick Phlebovirus Genotypes Lacking Evidence for Vertebrate Infections in Anatolia and Thrace, Turkey

scientific article published on 01 August 2019

Novel paramyxoviruses in free-ranging European bats.

scientific article

Proficiency Testing of Metagenomics-Based Detection of Food-Borne Pathogens Using a Complex Artificial Sequencing Dataset

scientific article published on 04 November 2020

Proficiency Testing of Virus Diagnostics Based on Bioinformatics Analysis of Simulated In Silico High-Throughput Sequencing Data Sets

scientific article published on 26 July 2019

Protocol for metagenomic virus detection in clinical specimens

scientific article published on January 2015

Re-assembly of nineteenth-century smallpox vaccine genomes reveals the contemporaneous use of horsepox and horsepox-related viruses in the USA

scientific article published on 04 December 2020

RespiCoV: Simultaneous identification of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) and 46 respiratory tract viruses and bacteria by amplicon-based Oxford-Nanopore MinION sequencing

scientific article published on 09 March 2022

Survey and Characterization of Jingmen Tick Virus Variants

scientific article published on 17 November 2019

The virome of German bats: comparing virus discovery approaches

scientific article published on 01 April 2021

Viral Metagenomics on Blood-Feeding Arthropods as a Tool for Human Disease Surveillance

scientific article

West Nile virus, Anopheles flavivirus, a novel flavivirus as well as Merida-like rhabdovirus Turkey in field-collected mosquitoes from Thrace and Anatolia

scientific article published on 8 November 2017

Zwiesel bat banyangvirus, a potentially zoonotic Huaiyangshan banyangvirus (Formerly known as SFTS)-like banyangvirus in Northern bats from Germany

scientific article published on 28 January 2020

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