List of works - Runxuan Zhang

3D RNA-seq: a powerful and flexible tool for rapid and accurate differential expression and alternative splicing analysis of RNA-seq data for biologists

scientific article published on 19 December 2020

A high quality Arabidopsis transcriptome for accurate transcript-level analysis of alternative splicing

scientific article

A high-resolution single-molecule sequencing-based Arabidopsis transcriptome using novel methods of Iso-seq analysis

scientific article published in 2022

AtRTD - a comprehensive reference transcript dataset resource for accurate quantification of transcript-specific expression in Arabidopsis thaliana.

scientific article published on 25 June 2015

Chromatin accessibility landscapes activated by cell-surface and intracellular immune receptors

scientific article published in 2021

Cold-Dependent Expression and Alternative Splicing of Arabidopsis Long Non-coding RNAs

scientific article published on 28 February 2019

Differential nucleosome occupancy modulates alternative splicing in Arabidopsis thaliana

scientific article published on 01 November 2020

Downy Mildew effector HaRxL21 interacts with the transcriptional repressor TOPLESS to promote pathogen susceptibility

scientific article published on 12 August 2020

Evaluation and improvement of the regulatory inference for large co-expression networks with limited sample size

scientific article

High-quality reference transcript datasets hold the key to transcript-specific RNA-sequencing analysis in plants

scientific article published on 23 September 2016

How does temperature affect splicing events? Isoform switching of splicing factors regulates splicing of LATE ELONGATED HYPOCOTYL (LHY).

scientific article published on 13 March 2018

Nonsense-mediated RNA Decay Factor UPF1 is Critical for Post-transcriptional and Post-translational Gene Regulation in Arabidopsis

scientific article published on 14 July 2020

Rapid and Dynamic Alternative Splicing Impacts the Arabidopsis Cold Response Transcriptome

scientific article published on 15 May 2018

TSIS: an R package to infer alternative splicing isoform switches for time-series data

scientific article published on October 2017

The proteome of developing barley anthers during meiotic prophase I

scientific article published on 01 March 2022

The value of genotype-specific reference for transcriptome analyses in barley

scientific article published on 22 April 2022

List of works by Runxuan Zhang