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List of works by David M Aanensen

A genomic portrait of the emergence, evolution, and global spread of a methicillin-resistant Staphylococcus aureus pandemic

scientific article

A single multilocus sequence typing (MLST) scheme for seven pathogenic Leptospira species

scientific article

Building a genomic framework for prospective MRSA surveillance in the United Kingdom and the Republic of Ireland

scientific article published on 15 December 2015

CLIMB-COVID: continuous integration supporting decentralised sequencing for SARS-CoV-2 genomic surveillance

publication published on 01 July 2021

Corrigendum: Building a genomic framework for prospective MRSA surveillance in the United Kingdom and the Republic of Ireland

scientific article published on September 2017

Dense genomic sampling identifies highways of pneumococcal recombination

scientific article published on 09 February 2014

Epidemic of carbapenem-resistant Klebsiella pneumoniae in Europe is driven by nosocomial spread

scientific article published on 29 July 2019

Establishment and lineage dynamics of the SARS-CoV-2 epidemic in the UK

scientific article published on 08 January 2021

Future-proofing and maximizing the utility of metadata: The PHA4GE SARS-CoV-2 contextual data specification package

scientific article published in 2022

Gene exchange drives the ecological success of a multi-host bacterial pathogen

article

Genetic analysis of the capsular biosynthetic locus from all 90 pneumococcal serotypes

scientific article

Genomic Analysis and Comparison of Two Gonorrhea Outbreaks

scientific article published on 28 June 2016

Genomic evidence for the evolution of Streptococcus equi: host restriction, increased virulence, and genetic exchange with human pathogens

scientific article

Integrated view of Vibrio cholerae in the Americas

scientific article

Melioidosis caused by Burkholderia pseudomallei in drinking water, Thailand, 2012.

scientific article published on February 2014

Molecular tracing of the emergence, adaptation, and transmission of hospital-associated methicillin-resistant Staphylococcus aureus ⬇️

scientific article

Multilocus sequence typing and further genetic characterization of the enigmatic pathogen, Staphylococcus hominis.

scientific article

Pneumococcal capsule synthesis locus cps as evolutionary hotspot with potential to generate novel serotypes by recombination.

scientific article published on 08 June 2017

Population genetic structuring of methicillin-resistant Staphylococcus aureus clone EMRSA-15 within UK reflects patient referral patterns

scientific article published on 4 July 2017

Recent Asian origin of chytrid fungi causing global amphibian declines.

scientific article

The phylogeography and incidence of multi-drug resistant typhoid fever in sub-Saharan Africa

scientific article published in Nature Communications

Whole-Genome Sequencing for Routine Pathogen Surveillance in Public Health: a Population Snapshot of Invasive Staphylococcus aureus in Europe

scientific article

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