List of works - Masaru Tateno

A novel ab initio identification system of transcriptional regulation motifs in genome DNA sequences based on direct comparison scheme of signal/noise distributions

scientific article published on 13 July 2012

A novel computational scheme for accurate and efficient evaluation of π-π and π-σ stacking

scientific article published on 12 May 2009

A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors

scientific article

A theoretical investigation of the functional role of the axial methionine ligand of the Cu(A) site in cytochrome c oxidase.

scientific article published on 30 June 2011

Biological applications of hybrid quantum mechanics/molecular mechanics calculation

scientific article published on 28 March 2012

Child and adolescent psychiatry in the Far East: A 5-year follow up on the Consortium on Academic Child and Adolescent Psychiatry in the Far East (CACAP-FE) study

scientific article published on 24 December 2018

Complex structure of cytochrome c-cytochrome c oxidase reveals a novel protein-protein interaction mode

scientific article published on 15 December 2016

Does LINE addiction exist? Potential concerns about Japan's most popular form of social media on smartphones

scientific article published on 27 May 2018

Editing mechanism of aminoacyl-tRNA synthetases operates by a hybrid ribozyme/protein catalyst

scientific article

Effective pumping proton collection facilitated by a copper site (CuB) of bovine heart cytochrome c oxidase, revealed by a newly developed time-resolved infrared system

scientific article published on 30 August 2013

Electronic and geometric structures of the blue copper site of azurin investigated by QM/MM hybrid calculations

scientific article published on 20 January 2009

Evaluation of stabilization energies in π-π and cation-π interactions involved in biological macromolecules by ab initio calculations

scientific article published on 20 January 2009

First principles molecular dynamics study of catalytic reactions of biological macromolecular systems: toward analyses with QM/MM hybrid molecular simulations.

scientific article published on 24 August 2007

Functional roles of a structural element involving Na+-pi interactions in the catalytic site of T1 lipase revealed by molecular dynamics simulations.

scientific article published in November 2009

Identification of the nucleophilic factors and the productive complex for the editing reaction by leucyl-tRNA synthetase

scientific article

Is it possible for short peptide composed of positively- and negatively-charged "hydrophilic" amino acid residue-clusters to form metastable "hydrophobic" packing?

scientific article published on 01 May 2019

Modulation of electronic structures of bases through DNA recognition of protein

scientific article published on 09 March 2010

Personality traits of female vocational school students in Japan with smartphone addiction with comorbid modern‐type depression traits

scientific article published in 2022

Prevalence rate of Internet addiction among Japanese college students: Two cross-sectional studies and reconsideration of cut-off points of Young's Internet Addiction Test in Japan

scientific article published on 02 July 2018

QM/MM hybrid calculation of biological macromolecules using a new interface program connecting QM and MM engines

scientific article published on 20 January 2009

Recent advances in jointed quantum mechanics and molecular mechanics calculations of biological macromolecules: schemes and applications coupled to ab initio calculations

scientific article published on 27 September 2010

Redox-dependent conformational changes of a proximal [4Fe-4S] cluster in Hyb-type [NiFe]-hydrogenase to protect the active site from O

scientific article published on 01 October 2018

Solution structure of an Arabidopsis WRKY DNA binding domain

scientific article

Solution structure of the B3 DNA binding domain of the Arabidopsis cold-responsive transcription factor RAV1

scientific article

Structural Instability of the Active Site of T1 Lipase Induced by Replacement of Na(+) with Water Complexed with the Phenylalanine Aromatic Ring.

scientific article published in July 2011

Structural basis for specific recognition of core fucosylation in N-glycans by Pholiota squarrosa lectin (PhoSL)

scientific article published on 01 July 2019

Structural modelling of the complex of leucyl-tRNA synthetase and mis-aminoacylated tRNALeu

scientific article published on 01 February 2009

Structures and evolutionary origins of plant-specific transcription factor DNA-binding domains

scientific article published on 03 January 2008

Topoisomerase IIβ targets DNA crossovers formed between distant homologous sites to induce chromatin opening

scientific article published on 29 October 2020

Unidirectional Mechanistic Valved Mechanisms for Ammonia Transport in GatCAB

scientific article published on 20 January 2012

List of works by Masaru Tateno

A novel ab initio identification system of transcriptional regulation motifs in genome DNA sequences based on direct comparison scheme of signal/noise distributions

A novel computational scheme for accurate and efficient evaluation of π-π and π-σ stacking

A novel zinc-binding motif revealed by solution structures of DNA-binding domains of Arabidopsis SBP-family transcription factors

A theoretical investigation of the functional role of the axial methionine ligand of the Cu(A) site in cytochrome c oxidase.

Biological applications of hybrid quantum mechanics/molecular mechanics calculation

Child and adolescent psychiatry in the Far East: A 5-year follow up on the Consortium on Academic Child and Adolescent Psychiatry in the Far East (CACAP-FE) study

Complex structure of cytochrome c-cytochrome c oxidase reveals a novel protein-protein interaction mode

Does LINE addiction exist? Potential concerns about Japan's most popular form of social media on smartphones

Editing mechanism of aminoacyl-tRNA synthetases operates by a hybrid ribozyme/protein catalyst

Effective pumping proton collection facilitated by a copper site (CuB) of bovine heart cytochrome c oxidase, revealed by a newly developed time-resolved infrared system

Electronic and geometric structures of the blue copper site of azurin investigated by QM/MM hybrid calculations

Evaluation of stabilization energies in π-π and cation-π interactions involved in biological macromolecules by ab initio calculations

First principles molecular dynamics study of catalytic reactions of biological macromolecular systems: toward analyses with QM/MM hybrid molecular simulations.

Functional roles of a structural element involving Na+-pi interactions in the catalytic site of T1 lipase revealed by molecular dynamics simulations.

Identification of the nucleophilic factors and the productive complex for the editing reaction by leucyl-tRNA synthetase

Is it possible for short peptide composed of positively- and negatively-charged "hydrophilic" amino acid residue-clusters to form metastable "hydrophobic" packing?

Modulation of electronic structures of bases through DNA recognition of protein

Personality traits of female vocational school students in Japan with smartphone addiction with comorbid modern‐type depression traits

Prevalence rate of Internet addiction among Japanese college students: Two cross-sectional studies and reconsideration of cut-off points of Young's Internet Addiction Test in Japan

QM/MM hybrid calculation of biological macromolecules using a new interface program connecting QM and MM engines

Recent advances in jointed quantum mechanics and molecular mechanics calculations of biological macromolecules: schemes and applications coupled to ab initio calculations

Redox-dependent conformational changes of a proximal [4Fe-4S] cluster in Hyb-type [NiFe]-hydrogenase to protect the active site from O

Solution structure of an Arabidopsis WRKY DNA binding domain

Solution structure of the B3 DNA binding domain of the Arabidopsis cold-responsive transcription factor RAV1

Structural Instability of the Active Site of T1 Lipase Induced by Replacement of Na(+) with Water Complexed with the Phenylalanine Aromatic Ring.

Structural basis for specific recognition of core fucosylation in N-glycans by Pholiota squarrosa lectin (PhoSL)

Structural modelling of the complex of leucyl-tRNA synthetase and mis-aminoacylated tRNALeu

Structures and evolutionary origins of plant-specific transcription factor DNA-binding domains

Topoisomerase IIβ targets DNA crossovers formed between distant homologous sites to induce chromatin opening

Unidirectional Mechanistic Valved Mechanisms for Ammonia Transport in GatCAB