List of works - Ruth Baker

A one-dimensional individual-based mechanical model of cell movement in heterogeneous tissues and its coarse-grained approximation

scientific article published on 24 July 2019

Analysis of stationary droplets in a generic Turing reaction-diffusion system ⬇️

scientific article published on November 23, 2010

Bayesian uncertainty quantification for data-driven equation learning

scientific article published in 2021

Biologically-informed neural networks guide mechanistic modeling from sparse experimental data

scientific article published on 01 December 2020

Characterizing transport through a crowded environment with different obstacle sizes.

scientific article

Chaste: Cancer, Heart and Soft Tissue Environment

scientific article published on 13 March 2020

Critical time scales for advection-diffusion-reaction processes

scientific article published on 23 April 2012

Efficient Bayesian inference for mechanistic modelling with high-throughput data

scientific article published on 21 June 2022

Efficient parameter sensitivity computation for spatially extended reaction networks. ⬇️

scientific article published in January 2017

Incorporating chemical signalling factors into cell-based models of growing epithelial tissues ⬇️

scientific article published on September 7, 2011

Learning differential equation models from stochastic agent-based model simulations

scientific article published in 2021

Mathematical models of morphogen gradients and their effects on gene expression ⬇️

scientific article published on April 12, 2012

Mechanical Cell Competition in Heterogeneous Epithelial Tissues

scientific article published on 26 September 2020

Mechanistic models versus machine learning, a fight worth fighting for the biological community?

scientific article published on 01 May 2018

Modelling Aedes aegypti mosquito control via transgenic and sterile insect techniques: Endemics and emerging outbreaks ⬇️

scientific article published on April 19, 2013

Models of collective cell spreading with variable cell aspect ratio: A motivation for degenerate diffusion models ⬇️

scientific article published on February 2, 2011

Moments of action provide insight into critical times for advection-diffusion-reaction processes.

scientific article published on 25 September 2012

Pakman: a modular, efficient and portable tool for approximate Bayesian inference

scientific article published on 07 March 2020

Reconciling diverse mammalian pigmentation patterns with a fundamental mathematical model

scientific article (publication date: 2016)

Scalable population-level modelling of biological cells incorporating mechanics and kinetics in continuous time

scientific article published on 01 August 2018

Self-Organizing and Stochastic Behaviors During the Regeneration of Hair Stem Cells ⬇️

scientific article published on April 29, 2011

Self-assembly of biological networks via adaptive patterning revealed by avian intradermal muscle network formation

scientific article published on 09 May 2019

Self-organization process in newborn skin organoid formation inspires strategy to restore hair regeneration of adult cells.

scientific article published on 10 August 2017

Simplified approach for calculating moments of action for linear reaction-diffusion equations.

scientific article published on 15 November 2013

The impact of experimental design choices on parameter inference for models of growing cell colonies

scientific article published on 29 August 2018

The impact of temporal sampling resolution on parameter inference for biological transport models

scientific article published on 25 June 2018

Uniformization techniques for stochastic simulation of chemical reaction networks

scientific article published on 01 April 2019

List of works by Ruth Baker