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List of works by Nir Yosef

A Python library for probabilistic analysis of single-cell omics data

scientific article published on 07 February 2022

A new way to build cell lineages

scientific article published on 23 March 2017

An IL-27-Driven Transcriptional Network Identifies Regulators of IL-10 Expression across T Helper Cell Subsets

scientific article published on 01 November 2020

Coverage-dependent bias creates the appearance of binary splicing in single cells

scientific article published on 29 June 2020

Cross-tissue immune cell analysis reveals tissue-specific features in humans

scientific article published on 13 May 2022

Deep generative modeling for single-cell transcriptomics.

scientific article published on 30 November 2018

DestVI identifies continuums of cell types in spatial transcriptomics data

scientific article published in 2022

Enhancing scientific discoveries in molecular biology with deep generative models

scientific article published on 01 September 2020

Functional interpretation of single cell similarity maps

scientific article published on 26 September 2019

Integrated single cell analysis of blood and cerebrospinal fluid leukocytes in multiple sclerosis

scientific article published on 14 January 2020

Mapping single-cell data to reference atlases by transfer learning

scientific article published on 30 August 2021

Meta-analysis of massively parallel reporter assays enables prediction of regulatory function across cell types

scientific article published on 18 June 2019

MultiVI: deep generative model for the integration of multimodal data

scientific article published on 29 June 2023

Probabilistic harmonization and annotation of single-cell transcriptomics data with deep generative models

scientific article published on 01 January 2021

Protein C receptor (PROCR) is a negative regulator of Th17 pathogenicity.

scientific article published on 26 September 2016

Reconstructing B-cell receptor sequences from short-read single-cell RNA sequencing with BRAPeS

scientific article published on 26 August 2019

Self-guarding of MORC3 enables virulence factor-triggered immunity

scientific article published on 10 November 2021

Simulating multiple faceted variability in single cell RNA sequencing

scientific article published on 13 June 2019

Single-cell RNA-seq reveals dynamic paracrine control of cellular variation

scientific article

Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells

scientific article (publication date: 13 June 2013)

The Human Cell Atlas

scientific article

Use antibiotics in cell culture with caution: genome-wide identification of antibiotic-induced changes in gene expression and regulation.

scientific article

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