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List of works by Michael R Hoopmann

2021 Special Issue on Software Tools and Resources: Finding the Right Tools for the Job

scientific article published on 02 April 2021

2023 Special Issue on Software Tools and Resources: Accelerating Research with New and Evolving Open Source Software

scientific article published in 2023

A Protein Standard That Emulates Homology for the Characterization of Protein Inference Algorithms

scientific article published on 16 April 2018

ABRF Proteome Informatics Research Group (iPRG) 2016 Study: Inferring Proteoforms from Bottom-up Proteomics Data.

scientific article

Absence of full-length dystrophin impairs normal maturation and contraction of cardiomyocytes derived from human-induced pluripotent stem cells

scientific article published on 01 February 2020

Community-integrated omics links dominance of a microbial generalist to fine-tuned resource usage

scientific article

Comparative integrated omics: identification of key functionalities in microbial community-wide metabolic networks

scientific article

DIALib-QC an assessment tool for spectral libraries in data-independent acquisition proteomics

scientific article published on 16 October 2020

Discovery and Visualization of Uncharacterized Drug-Protein Adducts Using Mass Spectrometry

scientific article published on 20 February 2022

First Community-Wide, Comparative Cross-Linking Mass Spectrometry Study

scientific article published on 22 May 2019

Identification of Peptide Features in Precursor Spectra Using Hardklör and Krönik ⬇️

scientific article published on March 1, 2012

Insights from the First Phosphopeptide Challenge of the MS Resource Pillar of the HUPO Human Proteome Project

scientific article published on 09 November 2020

Integration of time-series meta-omics data reveals how microbial ecosystems respond to disturbance

scientific article published on 19 October 2020

PTMProphet: Fast and Accurate Mass Modification Localization for the Trans-Proteomic Pipeline

scientific article published on 22 July 2019

Robust determination of differential abundance in shotgun proteomics using nonparametric statistics

scientific article published on 01 December 2018

Roles of bacteriophages, plasmids and CRISPR immunity in microbial community dynamics revealed using time-series integrated meta-omics ⬇️

scientific article published on 02 November 2020

SPACEPro: A Software Tool for Analysis of Protein Sample Cleavage for Tandem Mass Spectrometry

scientific article published on 05 February 2021

Special Issue on Software Tools and Resources: Acknowledging the Toolmakers of Science

scientific article published on 01 February 2019

StPeter: Seamless Label-Free Quantification with the Trans-Proteomic Pipeline

scientific article published on 5 February 2018

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