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List of works by Kirk Roberts

A Hybrid Deep Learning Approach for Spatial Trigger Extraction from Radiology Reports

scientific article published on 01 November 2020

A Semantic Parsing Method for Mapping Clinical Questions to Logical Forms.

scientific article published in January 2017

A content-based dataset recommendation system for researchers-a case study on Gene Expression Omnibus (GEO) repository

scientific article published on 01 October 2020

A content-based literature recommendation system for datasets to improve data reusability - A case study on Gene Expression Omnibus (GEO) datasets

scientific article published on 06 March 2020

A dataset of 200 structured product labels annotated for adverse drug reactions.

scientific article

A dataset of chest X-ray reports annotated with Spatial Role Labeling annotations

scientific article published on 25 July 2020

A frame semantic overview of NLP-based information extraction for cancer-related EHR notes

scientific article published on 04 October 2019

A hybrid approach to automatic de-identification of psychiatric notes.

scientific article published on 07 June 2017

A publicly available benchmark for biomedical dataset retrieval: the reference standard for the 2016 bioCADDIE dataset retrieval challenge

scientific article published in January 2017

Adapting Word Embeddings from Multiple Domains to Symptom Recognition from Psychiatric Notes.

scientific article published on 18 May 2018

An Ensemble Method for Spelling Correction in Consumer Health Questions

scientific article

An Ontology-Powered Dialogue Engine For Patient Communication of Vaccines

scientific article published on 01 October 2019

An evaluation of two commercial deep learning-based information retrieval systems for COVID-19 literature

scientific article published on 16 November 2020

An informatics research platform to make public gene expression time-course datasets reusable for more scientific discoveries

scientific article published on 01 November 2020

Application of an ontology for model cards to generate computable artifacts for linking machine learning information from biomedical research

scientific article published on 28 April 2023

Automatic Extraction and Post-coordination of Spatial Relations in Consumer Language

scientific article

Automatically classifying question types for consumer health questions

scientific article published on 14 November 2014

Combining Open-domain and Biomedical Knowledge for Topic Recognition in Consumer Health Questions

scientific article

Conversational ontology operator: patient-centric vaccine dialogue management engine for spoken conversational agents

scientific article published on 14 December 2020

Deep Representation Learning of Patient Data from Electronic Health Records (EHR): A Systematic Review

scientific article published on 30 December 2020

Deep learning in clinical natural language processing: a methodical review

scientific article published on 01 March 2020

Deep learning-based NLP data pipeline for EHR-scanned document information extraction

scientific article published in 2022

Enhancing clinical concept extraction with contextual embeddings

scientific article published on 01 November 2019

Extracting Concepts for Precision Oncology from the Biomedical Literature

scientific article published on 17 May 2021

Final Reference Standard for 200 SPLs annotated for ADRs

The final reference standard data set for structured product labels annotated for adverse drug reactions

Leveraging existing corpora for de-identification of psychiatric notes using domain adaptation.

scientific article published in January 2017

Patient Representation Transfer Learning from Clinical Notes based on Hierarchical Attention Network

scientific article published on 30 May 2020

Psychiatric symptom recognition without labeled data using distributional representations of phrases and on-line knowledge

scientific article

Relation Extraction from Clinical Narratives Using Pre-trained Language Models

scientific article published on 01 January 2019

Resource Classification for Medical Questions

scientific article

Searching for scientific evidence in a pandemic: An overview of TREC-COVID

scientific article published on 08 July 2021

Social Media as a Research Tool (SMaaRT) for Risky Behavior Analytics: Methodological Review

scientific article published on 30 November 2020

The role of fine-grained annotations in supervised recognition of risk factors for heart disease from EHRs

scientific article published on 26 June 2015

Towards an ontology-based medication conversational agent for PrEP and PEP

scientific article published on 01 July 2020

Understanding Spatial Language in Radiology: Representation Framework, Annotation, and Spatial Relation Extraction from Chest X-ray Reports using Deep Learning

scientific article published on 17 June 2020

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