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List of works by Tatsuhiko Tsunoda

A deletion mutation in myosin heavy chain 11 causing familial thoracic aortic dissection in two Japanese pedigrees

scientific article published on 3 June 2015

A functional SNP in CILP, encoding cartilage intermediate layer protein, is associated with susceptibility to lumbar disc disease

scientific article

A functional SNP in FLT1 increases risk of coronary artery disease in a Japanese population

scientific article published on 21 January 2016

A functional SNP in PSMA6 confers risk of myocardial infarction in the Japanese population

scientific article

A functional variant in ZNF512B is associated with susceptibility to amyotrophic lateral sclerosis in Japanese

A genome-wide association analysis identifies NMNAT2 and HCP5 as susceptibility loci for Kawasaki disease.

scientific article published on 31 August 2017

A genome-wide association study identified AFF1 as a susceptibility locus for systemic lupus eyrthematosus in Japanese

scientific journal article

A genome-wide association study identifies 2 susceptibility Loci for Crohn's disease in a Japanese population

scientific journal article

A genome-wide association study identifies PLCL2 and AP3D1-DOT1L-SF3A2 as new susceptibility loci for myocardial infarction in Japanese

scientific journal article

A genome-wide association study identifies common variants near LBX1 associated with adolescent idiopathic scoliosis

scientific article published on 23 October 2011

A genome-wide association study identifies four susceptibility loci for keloid in the Japanese population

scientific article published on 15 August 2010

A genome-wide association study identifies locus at 10q22 associated with clinical outcomes of adjuvant tamoxifen therapy for breast cancer patients in Japanese

scientific journal article

A genome-wide association study identifies three new risk loci for Kawasaki disease

scientific article published on 25 March 2012

A genome-wide association study identifies three new susceptibility loci for ulcerative colitis in the Japanese population

scientific article

A genome-wide association study identifies variants in the HLA-DP locus associated with chronic hepatitis B in Asians

scientific article published on 6 April 2009

A genome-wide association study in the Japanese population identifies susceptibility loci for type 2 diabetes at UBE2E2 and C2CD4A-C2CD4B

scientific article published on 05 September 2010

A genome-wide association study of chronic hepatitis B identified novel risk locus in a Japanese population

scientific article published on 12 July 2011

A genome-wide association study of nephrolithiasis in the Japanese population identifies novel susceptible Loci at 5q35.3, 7p14.3, and 13q14.1

scientific journal article

A practical method to detect SNVs and indels from whole genome and exome sequencing data

scientific article

A regulatory variant in CCR6 is associated with rheumatoid arthritis susceptibility

scientific article published on 09 May 2010

A second generation human haplotype map of over 3.1 million SNPs

scientific article

A single-nucleotide polymorphism in ANK1 is associated with susceptibility to type 2 diabetes in Japanese populations

scientific article

Analyses of non-coding somatic drivers in 2,658 cancer whole genomes

scientific article published on 05 February 2020

Association analyses of East Asian individuals and trans-ancestry analyses with European individuals reveal new loci associated with cholesterol and triglyceride levels

scientific article

Association of a novel long non-coding RNA in 8q24 with prostate cancer susceptibility

scientific article published on 28 September 2010

Association of an IGHV3-66 gene variant with Kawasaki disease

scientific article published on 26 October 2020

Association study of COL9A2 with lumbar disc disease in the Japanese population

scientific article

CYP2D6 genotyping for functional-gene dosage analysis by allele copy number detection

scientific article published on 18 June 2009

Circulating Tumor DNA Analysis for Liver Cancers and Its Usefulness as a Liquid Biopsy

scientific article published on 17 June 2015

Common variants at CDKAL1 and KLF9 are associated with body mass index in east Asian populations

scientific article published on 19 February 2012

Common variants on 14q32 and 13q12 are associated with DLBCL susceptibility

scientific journal article

DeepInsight: A methodology to transform a non-image data to an image for convolution neural network architecture

scientific article published on 06 August 2019

Erratum: Whole-genome mutational landscape and characterization of noncoding and structural mutations in liver cancer

scientific article published on 01 May 2016

Exome Analyses of Long QT Syndrome Reveal Candidate Pathogenic Mutations in Calmodulin-Interacting Genes

scientific article published in 2015

Exploring predictive biomarkers from clinical genome-wide association studies via multidimensional hierarchical mixture models

scientific article published on 10 September 2018

Functional SNPs in CD244 increase the risk of rheumatoid arthritis in a Japanese population

scientific article published on 14 September 2008

Functional variants in ADH1B and ALDH2 coupled with alcohol and smoking synergistically enhance esophageal cancer risk

scientific article published on 19 August 2009

Functional variants in NFKBIE and RTKN2 involved in activation of the NF-κB pathway are associated with rheumatoid arthritis in Japanese

scientific journal article

Gene expression dataset for whole cochlea of Macaca fascicularis

scientific article published in Scientific Reports

Genetic Variation in the SLC8A1 Calcium Signaling Pathway Is Associated With Susceptibility to Kawasaki Disease and Coronary Artery Abnormalities

scientific article

Genetic differences in the two main groups of the Japanese population based on autosomal SNPs and haplotypes

scientific article published on 29 March 2012

Genetic variants in GPR126 are associated with adolescent idiopathic scoliosis

scientific article

Genome-Wide Association Study of Peripheral Arterial Disease in a Japanese Population

scientific article published on 21 October 2015

Genome-Wide Screening of Genes Showing Altered Expression in Liver Metastases of Human Colorectal Cancers by cDNA Microarray ⬇️

scientific article published on September 1, 2001

Genome-wide association study for C-reactive protein levels identified pleiotropic associations in the IL6 locus

Genome-wide association study identifies eight new susceptibility loci for atopic dermatitis in the Japanese population

scientific journal article

Genome-wide association study identifies five new susceptibility loci for prostate cancer in the Japanese population

scientific journal article

Genome-wide association study identifies three new susceptibility loci for adult asthma in the Japanese population

scientific journal article

Genome-wide association study identifies three novel loci for type 2 diabetes

scientific article

Genome-wide association study suggests four variants influencing outcomes with ranibizumab therapy in exudative age-related macular degeneration

scientific article published on 27 July 2018

Genome-wide detection and characterization of positive selection in human populations

scientific article

Growth Hormone-Dependent Pathogenesis of Human Hepatic Steatosis in a Novel Mouse Model Bearing a Human Hepatocyte-Repopulated Liver ⬇️

scientific article published on February 8, 2011

HLA-DQB1*03 confers susceptibility to chronic hepatitis C in Japanese: a genome-wide association study

scientific article

Hierarchical Maximum Likelihood Clustering Approach

scientific article

Histone lysine methyltransferase SETD8 promotes carcinogenesis by deregulating PCNA expression ⬇️

scientific article published on May 3, 2012

IL-28B predicts response to chronic hepatitis C therapy--fine-mapping and replication study in Asian populations.

scientific article published on 12 January 2011

IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis.

scientific article published on 4 April 2018

IRX4 at 5p15 suppresses prostate cancer growth through the interaction with vitamin D receptor, conferring prostate cancer susceptibility

scientific article published on 8 February 2012

Identification of a set of genes associated with response to interleukin-2 and interferon-α combination therapy for renal cell carcinoma through genome-wide gene expression profiling ⬇️

scientific article published on September 10, 2010

Identification of a susceptibility locus for severe adolescent idiopathic scoliosis on chromosome 17q24.3.

scientific article

Identification of independent risk loci for Graves' disease within the MHC in the Japanese population

scientific article published on 08 September 2011

Identification of nine novel loci associated with white blood cell subtypes in a Japanese population

scientific article

Immune subtypes and neoantigen-related immune evasion in advanced colorectal cancer

scientific article published on 06 January 2022

Integrated analysis of human genetic association study and mouse transcriptome suggests LBH and SHF genes as novel susceptible genes for amyloid-β accumulation in Alzheimer's disease

scientific article published on 13 July 2018

Integrated analysis of whole genome and transcriptome sequencing reveals diverse transcriptomic aberrations driven by somatic genomic changes in liver cancers

scientific article

Integrating genetic, transcriptional, and functional analyses to identify 5 novel genes for atrial fibrillation

scientific article published on 14 August 2014

International network of cancer genome projects

scientific article

Lessons for pharmacogenomics studies: association study between CYP2D6 genotype and tamoxifen response

scientific article published on September 2010

Lumbar disc degeneration is linked to a carbohydrate sulfotransferase 3 variant.

scientific article

Making a haplotype catalog with estimated frequencies based on SNP homozygotes

scientific article published on 20 May 2010

Meta-analysis identifies common variants associated with body mass index in east Asians

scientific article published on 19 February 2012

Meta-analysis identifies multiple loci associated with kidney function-related traits in east Asian populations

scientific article published on 15 July 2012

Meta-analysis identifies six new susceptibility loci for atrial fibrillation

scientific article published on 29 April 2012

Meta-analysis of genome-wide association studies in East Asian-ancestry populations identifies four new loci for body mass index

scientific article

Meta-analysis of genome-wide association studies of adult height in East Asians identifies 17 novel loci

scientific article

Microarray Analysis of Gene‐expression Profiles in Diffuse Large B‐cell Lymphoma: Identification of Genes Related to Disease Progression ⬇️

scientific article (publication date: August 2002)

Morphological and microarray analyses of human hepatocytes from xenogeneic host livers ⬇️

scientific article published on November 12, 2012

Multiancestry association study identifies new asthma risk loci that colocalize with immune-cell enhancer marks.

scientific article published on 22 December 2017

Multiple loci are associated with white blood cell phenotypes

scientific article

New sequence variants in HLA class II/III region associated with susceptibility to knee osteoarthritis identified by genome-wide association study

scientific article

Novel calmodulin mutations associated with congenital arrhythmia susceptibility

scientific article published on 10 June 2014

Novel genetic markers associate with atrial fibrillation risk in Europeans and Japanese

scientific article published on 30 January 2014

Pathway analysis of genome-wide data improves warfarin dose prediction

scientific article

Performance comparison of four commercial human whole-exome capture platforms

scientific article published on 3 August 2015

PhoglyStruct: Prediction of phosphoglycerylated lysine residues using structural properties of amino acids

scientific article published in Scientific Reports

Polygenic burdens on cell-specific pathways underlie the risk of rheumatoid arthritis

scientific article published on 29 May 2017

Prepublication data sharing

scientific article

Profiling the inhibitory receptors LAG-3, TIM-3, and TIGIT in renal cell carcinoma reveals malignancy

scientific article published on 20 September 2021

Publisher Correction: IMSindel: An accurate intermediate-size indel detection tool incorporating de novo assembly and gapped global-local alignment with split read analysis

scientific article published on 04 July 2018

Quantification of multicellular colonization in tumor metastasis using exome-sequencing data

scientific article published on 15 February 2020

RAM-PGK: Prediction of Lysine Phosphoglycerylation Based on Residue Adjacency Matrix

scientific article published on 20 December 2020

Reproducibility, performance, and clinical utility of a genetic risk prediction model for prostate cancer in Japanese

scientific article

Risk prediction models for dementia constructed by supervised principal component analysis using miRNA expression data

scientific article published on 25 February 2019

SNPs in KCNQ1 are associated with susceptibility to type 2 diabetes in East Asian and European populations

article

SNPs on chromosome 5p15.3 associated with myocardial infarction in Japanese population

scientific article published on 25 November 2010

Significant effect of polymorphisms in CYP2D6 and ABCC2 on clinical outcomes of adjuvant tamoxifen therapy for breast cancer patients

scientific article published on February 2010

Stepwise iterative maximum likelihood clustering approach

scientific article

The construction of risk prediction models using GWAS data and its application to a type 2 diabetes prospective cohort

scientific article

The prediction models for postoperative overall survival and disease-free survival in patients with breast cancer

scientific article

Variants encoding a restricted carboxy-terminal domain of SLC12A2 cause hereditary hearing loss in humans

scientific article published on 15 April 2020

Variants in the SCN5A Promoter Associated With Various Arrhythmia Phenotypes

scientific article published on 13 September 2016

Variation in TP63 is associated with lung adenocarcinoma susceptibility in Japanese and Korean populations

scientific article published on 26 September 2010

Variation in the DEPDC5 locus is associated with progression to hepatocellular carcinoma in chronic hepatitis C virus carriers

scientific journal article

Whole genome sequencing discriminates hepatocellular carcinoma with intrahepatic metastasis from multi-centric tumors

scientific article

Whole-genome mutational landscape and characterization of noncoding and structural mutations in liver cancer.

scientific article published on 11 April 2016

Whole-genome mutational landscape of liver cancers displaying biliary phenotype reveals hepatitis impact and molecular diversity

scientific article published on 30 January 2015

Whole-genome sequencing and comprehensive variant analysis of a Japanese individual using massively parallel sequencing

article

Whole-genome sequencing of liver cancers identifies etiological influences on mutation patterns and recurrent mutations in chromatin regulators

scientific article

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