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List of works by Jack A Gilbert

(Meta)genomic insights into the pathogenome of Cellulosimicrobium cellulans

scientific article

A New N-Acyl Homoserine Lactone Synthase in an Uncultured Symbiont of the Red Sea Sponge Theonella swinhoei

scientific article published on 11 December 2015

A Phylogeny-Informed Analysis of the Global Coral-Symbiodiniaceae Interaction Network Reveals that Traits Correlated with Thermal Bleaching Are Specific to Symbiont Transmission Mode

scientific article published on 10 May 2021

A Simple Microbiome in the European Common Cuttlefish,

scientific article published on 14 May 2019

A call for an international network of genomic observatories (GOs)

scientific article

A communal catalogue reveals Earth's multiscale microbial diversity

scientific article published in November 2017

A decadal view of biodiversity informatics: challenges and priorities

scientific article

A microbial survey of the International Space Station (ISS).

scientific article published on 5 December 2017

A rare SAR11 fosmid clone confirming genetic variability in the 'Candidatus Pelagibacter ubique' genome

scientific article

A simple microbiome in esophagus and gills of the European common cuttlefish, Sepia officinalis

scientific article published on 12 October 2018

A simple novel device for air sampling by electrokinetic capture

scientific article

ASM Journals Eliminate Impact Factor Information from Journal Websites

scientific article

ASM Journals Eliminate Impact Factor Information from Journal Websites

scientific article published on 11 July 2016

ASM Journals Eliminate Impact Factor Information from Journal Websites

scholarly article by Arturo Casadevall et al published October 2016 in Clinical Microbiology Reviews

ASM Journals Eliminate Impact Factor Information from Journal Websites

ASM Journals Eliminate Impact Factor Information from Journal Websites

scholarly article by Arturo Casadevall published in September 2016

ASM Journals Eliminate Impact Factor Information from Journal Websites

article published in 2016

ASM Journals Eliminate Impact Factor Information from Journal Websites

ASM Journals Eliminate Impact Factor Information from Journal Websites

scientific article published in 2016

ASM Journals Eliminate Impact Factor Information from Journal Websites.

scientific article

Adenomatous Polyps Are Driven by Microbe-Instigated Focal Inflammation and Are Controlled by IL-10–Producing T Cells ⬇️

scientific article published on August 16, 2013

Age and Mothers: Potent Influences of Children's Skin Microbiota

scientific article published on 13 August 2019

Agricultural Risk Factors Influence Microbial Ecology in Honghu Lake

article

Agricultural intensification and the functional capacity of soil microbes on smallholder African farms

article

American Gut: an Open Platform for Citizen Science Microbiome Research

article

Analysis of gut microbiome, nutrition and immune status in autism spectrum disorder: a case-control study in Ecuador

scientific article published on 18 September 2019

Aquarium microbiome response to ninety-percent system water change: Clues to microbiome management

scientific article published on 28 May 2015

Arsenic rich Himalayan hot spring metagenomics reveal genetically novel predator-prey genotypes

scientific article published on 7 May 2015

Associations between fungal and bacterial microbiota of airways and asthma endotypes

scientific article published on 03 July 2019

Athletic equipment microbiota are shaped by interactions with human skin

scientific article published on 19 June 2015

Bacterial Community Composition and Dynamics Spanning Five Years in Freshwater Bog Lakes.

scientific article

Bacterial and Archaeal Viruses of Himalayan Hot Springs at Manikaran Modulate Host Genomes

article

Bacterial colonization and succession in a newly opened hospital.

scientific article

Bacterial communities associated with cell phones and shoes

scientific article published on 09 June 2020

Bacterial community composition and dynamics spanning five years in freshwater bog lakes

article

Beyond the genome: community-level analysis of the microbial world ⬇️

scientific article published on December 15, 2012

Bias in assessments of marine microbial biodiversity in fosmid libraries as evaluated by pyrosequencing

scientific article

Bioprospecting metagenomics for new glycoside hydrolases

scientific article published on January 2012

Carbon constrains fungal endophyte assemblages along the timberline

scientific article published on 2 December 2015

Change in Emiliania huxleyi Virus Assemblage Diversity but Not in Host Genetic Composition during an Ocean Acidification Mesocosm Experiment.

scientific article

Characterizing changes in soil bacterial community structure in response to short-term warming.

scientific article

Chemical composition of material extractives influences microbial growth and dynamics on wetted wood materials

scientific article published on 02 September 2020

Collagen degradation and MMP9 activation by Enterococcus faecalis contribute to intestinal anastomotic leak

scientific article published on May 2015

Communities of microbial eukaryotes in the mammalian gut within the context of environmental eukaryotic diversity

scientific article published on 19 June 2014

Community ecology as a framework for human microbiome research

scientific article published on 27 May 2019

Comparative Analyses of Vertebrate Gut Microbiomes Reveal Convergence between Birds and Bats

scientific article published on 07 January 2020

Comparative Genomic Analysis Reveals Habitat-Specific Genes and Regulatory Hubs within the Genus Novosphingobium

scientific article

Comparative genetics of Enterococcus faecalis intestinal tissue isolates before and after surgery in a rat model of colon anastomosis

scientific article published on 28 April 2020

Comparative genomic analysis of nine Sphingobium strains: insights into their evolution and hexachlorocyclohexane (HCH) degradation pathways.

scientific article

Comparative genomic analysis of novel Acinetobacter symbionts: A combined systems biology and genomics approach

scientific article published on 5 July 2016

Comparative metagenomic analysis of soil microbial communities across three hexachlorocyclohexane contamination levels

scientific article

Comparison of multiple metagenomes using phylogenetic networks based on ecological indices

scientific article published on 29 April 2010

Conceptualizing a Genomics Software Institute (GSI)

scientific article (publication date: 19 March 2012)

Concurrent measurement of microbiome and allergens in the air of bedrooms of allergy disease patients in the Chicago area.

scientific article published on 3 June 2019

Conditionally rare taxa disproportionately contribute to temporal changes in microbial diversity

scientific article

Connecting genotype to phenotype in the era of high-throughput sequencing.

scientific article published on 21 March 2011

Consent insufficient for data release-Response

scientific article published on 01 May 2019

Consequences of tropical forest conversion to oil palm on soil bacterial community and network structure

scholarly article by Stephen A. Wood et al published September 2017 in Soil Biology and Biochemistry

Correction for Gonzalez et al., "Migraines Are Correlated with Higher Levels of Nitrate-, Nitrite-, and Nitric Oxide-Reducing Oral Microbes in the American Gut Project Cohort".

scientific article published on March 2017

Correction to: The chemodiversity of paddy soil dissolved organic matter correlates with microbial community at continental scales

scientific article published on 28 November 2020

Correction: A microbial survey of the International Space Station (ISS).

scientific article published on 27 February 2018

Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

scientific article published in February 2018

Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

article

Corticosteroid therapy and airflow obstruction influence the bronchial microbiome, which is distinct from that of bronchoalveolar lavage in asthmatic airways.

scientific article published on 25 November 2015

Cross-biome metagenomic analyses of soil microbial communities and their functional attributes.

scientific article

Culture-independent analysis of bacterial fuel contamination provides insight into the level of concordance with the standard industry practice of aerobic cultivation

scientific article (publication date: July 2011)

Current understanding of the human microbiome.

scientific article published in April 2018

DNA extraction protocols cause differences in 16S rRNA amplicon sequencing efficiency but not in community profile composition or structure

scientific article

Decreased microbial co-occurrence network stability and SCFA receptor level correlates with obesity in African-origin women

scientific article published in Scientific Reports

Defining seasonal marine microbial community dynamics

scientific article

Detecting personal microbiota signatures at artificial crime scenes

scientific article published on 30 May 2020

Detection of large numbers of novel sequences in the metatranscriptomes of complex marine microbial communities

scientific article

Differential Functional Constraints Cause Strain-Level Endemism in Polynucleobacter Populations

scientific article published on 24 May 2016

Direct Quantification of Inorganic Polyphosphate in Microbial Cells Using 4′-6-Diamidino-2-Phenylindole (DAPI) ⬇️

scientific article published on August 29, 2011

Distinct Biogeographic Patterns for Archaea, Bacteria, and Fungi along the Vegetation Gradient at the Continental Scale in Eastern China

scientific article

Distinct microbial communities associated with buried soils in the Siberian tundra

scientific article

Disturbance Regimes Predictably Alter Diversity in an Ecologically Complex Bacterial System.

scientific article

Disturbed subsurface microbial communities follow equivalent trajectories despite different structural starting points.

scientific article

Diverse protist grazers select for virulence-related traits in Legionella

scientific article published on 9 January 2015

Diversity, structure and convergent evolution of the global sponge microbiome

scientific article

Does the brain listen to the gut?

scientific article published on 25 May 2016

Draft Genome Sequence of 2-Methylpyridine-, 2-Ethylpyridine-, and 2-Hydroxypyridine-Degrading Arthrobacter sp. Strain ATCC 49987

scientific article published on 20 August 2020

Draft Genome Sequence of Pseudarthrobacter sp. Strain ATCC 49442 (Formerly Micrococcus luteus), a Pyridine-Degrading Bacterium

scientific article published on 17 September 2020

Draft Genome Sequence of Rhodococcus sp. Strain ATCC 49988, a Quinoline-Degrading Bacterium

scientific article published on 20 June 2019

Draft Genome of Halomonas Species Strain GFAJ-1 (ATCC BAA-2256) ⬇️

scientific article (publication date: April 2012)

Draft genome sequence of Achromobacter piechaudii strain HLE

scientific article

Draft genome sequence of Agrobacterium albertimagni strain AOL15

scientific article

Draft genome sequence of Alcaligenes faecalis subsp. faecalis NCIB 8687 (CCUG 2071).

scientific article

EMP Sample Submission Guide v1 (protocols.io.pfqdjmw)

Early-Career Scientists Shaping the World

scientific article published on 07 May 2019

Earth Microbiome Project and Global Systems Biology

scientific article published on 10 April 2018

Earth microbial co-occurrence network reveals interconnection pattern across microbiomes

scientific article published on 04 June 2020

Ecological medicine

scientific article published on 30 April 2018

Ecological succession and viability of human-associated microbiota on restroom surfaces.

scientific article

Ecology and Host Identity Outweigh Evolutionary History in Shaping the Bat Microbiome

scientific article published on 12 November 2019

Effects of Extended Postmortem Interval on Microbial Communities in Organs of the Human Cadaver

scientific article published on 08 December 2020

Effects of diurnal variation of gut microbes and high-fat feeding on host circadian clock function and metabolism

scientific article published on 16 April 2015

Environmental Sources of Bacteria Differentially Influence Host-Associated Microbial Dynamics.

scientific article

Erratum for Linz et al., "Bacterial Community Composition and Dynamics Spanning Five Years in Freshwater Bog Lakes".

scientific article published on 19 July 2017

Evidence for a persistent microbial seed bank throughout the global ocean

scientific article (publication date: 19 March 2013)

Existing Climate Change Will Lead to Pronounced Shifts in the Diversity of Soil Prokaryotes

scientific article published on 01 September 2018

Expression of the phosphonoalanine-degradative gene cluster from Variovorax sp. Pal2 is induced by growth on phosphonoalanine and phosphonopyruvate

scientific article

Feasibility of SARS-CoV-2 virus detection from consumer-grade cotton swabs

scientific article published on 18 May 2020

Feasibility of using alternative swabs and storage solutions for paired SARS-CoV-2 detection and microbiome analysis in the hospital environment

scientific article published on 18 August 2020

Fecal microbiota transplant rescues mice from human pathogen mediated sepsis by restoring systemic immunity

scientific article published on 11 May 2020

Forensic analysis of the microbiome of phones and shoes

scientific article published on 12 May 2015

From genomics to metagenomics

scientific article

Functional analysis of metagenomes and metatranscriptomes using SEED and KEGG

scientific article

Fungal community composition in soils subjected to long-term chemical fertilization is most influenced by the type of organic matter

scientific article

GABA-modulating bacteria of the human gut microbiota

scientific article published on 10 December 2018

Gene Expression Profiling: Metatranscriptomics ⬇️

scientific article published on 01 January 2011

Genetic correlation network prediction of forest soil microbial functional organization

scientific article published on 25 July 2018

Genome reduction in an abundant and ubiquitous soil bacterium 'Candidatus Udaeobacter copiosus'.

scientific article published on 31 October 2016

Genomic Characterization and Virulence Potential of Two Fusarium oxysporum Isolates Cultured from the International Space Station

scientific article published on 19 March 2019

Genomic Standards Consortium Projects

article

Genomic analysis of 38 Legionella species identifies large and diverse effector repertoires.

scientific article published on 11 January 2016

Genomic encyclopedia of bacteria and archaea: sequencing a myriad of type strains

scientific article published in August 2014

Genomic standards consortium projects

scientific article

Genomics in marine monitoring: new opportunities for assessing marine health status

scientific article

Geographic patterns of co-occurrence network topological features for soil microbiota at continental scale in eastern China

scientific article

Gut microbial features can predict host phenotype response to protein deficiency

scientific article published on 01 December 2018

Gut microbiome heritability is nearly universal but environmentally contingent

scientific article published in 2021

Gut microbiota composition and butyrate production in children affected by non-IgE-mediated cow's milk allergy

scientific article published in Scientific Reports

Gut microbiota, short chain fatty acids, and obesity across the epidemiologic transition: the METS-Microbiome study protocol

scientific article published on 06 August 2018

Handlebar: a flexible, web-based inventory manager for handling barcoded samples

scientific article published in March 2007

Housefly Larva Vermicomposting Efficiently Attenuates Antibiotic Resistance Genes in Swine Manure, with Concomitant Bacterial Population Changes

scientific article published on 21 August 2015

Human and environmental impacts on river sediment microbial communities

scientific article (publication date: 2014)

Identifying the plant-associated microbiome across aquatic and terrestrial environments: the effects of amplification method on taxa discovery

scientific article published on 20 December 2016

Immune Dysregulation in the Tonsillar Microenvironment of Periodic Fever, Aphthous Stomatitis, Pharyngitis, Adenitis (PFAPA) Syndrome

scientific article published on 05 December 2019

Impacts of indoor surface finishes on bacterial viability

scientific article published on 13 May 2019

Improved Bacterial 16S rRNA Gene (V4 and V4-5) and Fungal Internal Transcribed Spacer Marker Gene Primers for Microbial Community Surveys ⬇️

scientific article

Influence of acidic pH on hydrogen and acetate production by an electrosynthetic microbiome

scientific article (publication date: 2014)

Innate Immunity and Asthma Risk in Amish and Hutterite Farm Children

scientific article

Intestinal anastomotic injury alters spatially defined microbiome composition and function

scientific article

Intestinal tissues induce an SNP mutation in Pseudomonas aeruginosa that enhances its virulence: possible role in anastomotic leak

scientific article published in 2012

Introducing the Mangrove Microbiome Initiative: Identifying Microbial Research Priorities and Approaches To Better Understand, Protect, and Rehabilitate Mangrove Ecosystems

scientific article

Introducing the Microbiome into Precision Medicine

scientific article published on 25 October 2016

Invasive Plants Rapidly Reshape Soil Properties in a Grassland Ecosystem. ⬇️

scientific article published on 07 March 2017

Investigating the impact of storage conditions on microbial community composition in soil samples

scientific article

Isolation and initial characterization of a novel type of Baeyer-Villiger monooxygenase activity from a marine microorganism

scientific article published on 13 March 2012

Key metabolic pathways involved in xenobiotic biotransformation and stress responses revealed by transcriptomics of the mangrove oyster Crassostrea brasiliana

scientific article published on 2 July 2015

Lactobacillus rhamnosus GG-supplemented formula expands butyrate-producing bacterial strains in food allergic infants

scientific article published on 22 September 2015

Life in a World without Microbes

scientific article

Lifestyle evolution in cyanobacterial symbionts of sponges

scientific article published on 2 June 2015

Longitudinal analysis of microbial interaction between humans and the indoor environment

scientific article

Longitudinal homogenization of the microbiome between both occupants and the built environment in a cohort of United States Air Force Cadets

scientific article published on 02 May 2019

Longitudinal survey of microbiome associated with particulate matter in a megacity

scientific article published on 03 March 2020

Marine genomics: at the interface of marine microbial ecology and biodiscovery

scientific article

Measuring the microbiome: perspectives on advances in DNA-based techniques for exploring microbial life

scientific article

Meeting Report from the Genomic Standards Consortium (GSC) Workshop 10

scientific article (publication date: 25 December 2010)

Meeting Report from the Genomic Standards Consortium (GSC) Workshop 9

scientific article (publication date: 4 December 2010)

Meeting Report: "Metagenomics, Metadata and Meta-analysis" (M3) Special Interest Group at ISMB 2009

scientific article (publication date: 29 December 2009)

Meeting Report: "Metagenomics, Metadata and Meta-analysis" (M3) Workshop at the Pacific Symposium on Biocomputing 2010.

scientific article

Meeting report for the 1st skin microbiota workshop, boulder, CO October 15-16 2012.

scientific article

Meeting report of the RNA Ontology Consortium January 8-9, 2011.

scientific article

Meeting report: GSC M5 roundtable at the 13th International Society for Microbial Ecology meeting in Seattle, WA, USA August 22-27, 2010

scientific article (publication date: 15 December 2010)

Meeting report: Ocean 'omics science, technology and cyberinfrastructure: current challenges and future requirements (August 20-23, 2013).

scientific article

Meeting report: the 2 annual argonne soils workshop, argonne national laboratory, chicago illinois, USA, october 6-8, 2010

scientific article published on 15 November 2011

Meeting report: the terabase metagenomics workshop and the vision of an Earth microbiome project

scientific article

Membership and behavior of ultra-low-diversity pathogen communities present in the gut of humans during prolonged critical illness

scientific article

Metabolic Reconstruction and Modeling Microbial Electrosynthesis

scientific article published on 21 August 2017

Metabolic Reconstruction and Modeling Microbial Electrosynthesis

Metabolic and spatio-taxonomic response of uncultivated seafloor bacteria following the Deepwater Horizon oil spill

Metabolic potential of fatty acid oxidation and anaerobic respiration by abundant members of Thaumarchaeota and Thermoplasmata in deep anoxic peat

scientific article published on 22 May 2015

Metagenome Sequencing of Prokaryotic Microbiota Collected from Byron Glacier, Alaska ⬇️

scientific article (publication date: 21 March 2013)

Metagenomes and metatranscriptomes from the L4 long-term coastal monitoring station in the Western English Channel

scientific article

Metagenomes from two microbial consortia associated with Santa Barbara seep oil.

scientific article

Metagenomic analysis of basal ice from an Alaskan glacier.

scientific article published on 5 July 2018

Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California

scientific article

Metagenomics - a guide from sampling to data analysis

scientific article

Metagenomics reveals sediment microbial community response to Deepwater Horizon oil spill

scientific article (publication date: July 2014)

Metagenomics: A foundling finds its feet

scientific article

Metatranscriptomics reveals temperature-driven functional changes in microbiome impacting cheese maturation rate.

scientific article

Mice Fed an Obesogenic Western Diet, Administered Antibiotics, and Subjected to a Sterile Surgical Procedure Develop Lethal Septicemia with Multidrug-Resistant Pathobionts

scientific article published on 30 July 2019

Microbial Bebop: Creating Music from Complex Dynamics in Microbial Ecology ⬇️

scientific article published on March 6, 2013

Microbial Colonization of Germ-Free Mice Restores Neointimal Hyperplasia Development After Arterial Injury

scientific article published on 24 February 2020

Microbial Similarity between Students in a Common Dormitory Environment Reveals the Forensic Potential of Individual Microbial Signatures

scientific article published on 30 July 2019

Microbial and metabolic succession on common building materials under high humidity conditions

scientific article published on 16 April 2019

Microbial community assembly and metabolic function during mammalian corpse decomposition.

scientific article published on 10 December 2015

Microbial context predicts SARS-CoV-2 prevalence in patients and the hospital built environment

scientific article published on 22 November 2020

Microbial diversity in an intensively managed landscape is structured by landscape connectivity

scientific article

Microbial diversity--exploration of natural ecosystems and microbiomes

scientific article

Microbial exposure and human health

article

Microbial terroir for wine grapes

scientific article published on 05 December 2013

Microbiome profile associated with malignant pleural effusion

scientific article published on 08 May 2020

Microbiome-wide association studies link dynamic microbial consortia to disease

scientific article

Microbiota composition modulates inflammation and neointimal hyperplasia after arterial angioplasty

scientific article published on 05 February 2020

Migraines Are Correlated with Higher Levels of Nitrate-, Nitrite-, and Nitric Oxide-Reducing Oral Microbes in the American Gut Project Cohort

scientific article published on September 2016

Minimum information about a marker gene sequence (MIMARKS) and minimum information about any (x) sequence (MIxS) specifications

scientific article

Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea.

scientific article

Modeling microbial communities: Current, developing, and future technologies for predicting microbial community interaction ⬇️

scientific article published on March 23, 2012

Modeling microbial community structure and functional diversity across time and space

scientific article

Multilevel Research Strategies and Biological Systems

article

Network-based metabolic analysis and microbial community modeling

scientific article published on 6 April 2016

Nitrogen fixation and nitrogenase (nifH) expression in tropical waters of the eastern North Atlantic.

scientific article

Novel Analysis of Oceanic Surface Water Metagenomes Suggests Importance of Polyphosphate Metabolism in Oligotrophic Environments ⬇️

scientific article published on January 28, 2011

Omics for understanding microbial functional dynamics

scientific article published on 8 June 2011

Optimum Operating Room Environment for the Prevention of Surgical Site Infections

scientific article published on 12 April 2017

Our interface with the built environment: immunity and the indoor microbiota

scientific article published on March 2015

Permanent draft genome sequence of Vibrio tubiashii strain NCIMB 1337 (ATCC19106) ⬇️

scientific article

Permissive microbiome characterizes human subjects with a neurovascular disease cavernous angioma

scientific article published on 27 May 2020

Pharmacomicrobiomics: The Holy Grail to Variability in Drug Response?

scientific article published on 07 May 2019

Phylogenetic imprint of woody plants on the soil mycobiome in natural mountain forests of eastern China

article

Phylogeny-Aware Analysis of Metagenome Community Ecology Based on Matched Reference Genomes while Bypassing Taxonomy

scientific article published on 04 April 2022

Potential contribution of anammox to nitrogen loss from paddy soils in Southern China

scientific article

Potential for phosphonoacetate utilization by marine bacteria in temperate coastal waters

scientific article

Predicted Relative Metabolomic Turnover (PRMT): determining metabolic turnover from a coastal marine metagenomic dataset ⬇️

scientific article published on June 14, 2011

Predicting bacterial community assemblages using an artificial neural network approach

scientific article

Predicting ecosystem emergent properties at multiple scales

scientific article published in February 2015

Preparation and metatranscriptomic analyses of host-microbe systems

scientific article

Preserving microbial diversity

scientific article published in Science

Preserving microbial diversity

scientific article

Proceedings of the 2013 A.S.P.E.N. Research workshop: the interface between nutrition and the gut microbiome: implications and applications for human health [corrected].

scientific article

Proceedings of the first international summit on intestinal anastomotic leak, Chicago, Illinois, October 4-5, 2012.

scientific article published on 12 September 2014

Pyrosequencing of Mytilus galloprovincialis cDNAs: tissue-specific expression patterns

scientific article

Quantifying and Understanding Well-to-Well Contamination in Microbiome Research

scientific article published on 25 June 2019

RCN4GSC Workshop Report: Managing Data at the Interface of Biodiversity and (Meta)Genomics, March 2011.

scientific article

Reconstructing an ancestral genotype of two hexachlorocyclohexane-degrading Sphingobium species using metagenomic sequence data.

scientific article

Reconstructing the microbial diversity and function of pre-agricultural tallgrass prairie soils in the United States

scientific article

Recovering complete and draft population genomes from metagenome datasets

scientific article

Report of the 13(th) Genomic Standards Consortium Meeting, Shenzhen, China, March 4-7, 2012

scientific article (publication date: 25 May 2012)

Report of the 14th Genomic Standards Consortium Meeting, Oxford, UK, September 17-21, 2012

scientific article

Response of Horticultural Soil Microbiota to Different Fertilization Practices

scientific article published on 06 November 2020

Responses of Microbial Communities to Hydrocarbon Exposures

article

Salinity is a key factor driving the nitrogen cycling in the mangrove sediment

scientific article published on 28 March 2018

Saliva from obese individuals suppresses the release of aroma compounds from wine

scientific article (publication date: 2014)

Satellite remote sensing data can be used to model marine microbial metabolite turnover.

scientific article

Sex-specific effects of microbiome perturbations on cerebral Aβ amyloidosis and microglia phenotypes

scientific article published on 16 May 2019

Short-read reading-frame predictors are not created equal: sequence error causes loss of signal

scientific article

Significant Impacts of Increasing Aridity on the Arid Soil Microbiome.

scientific article

Size, composition, and source profiles of inhalable bioaerosols from Colorado dairies

journal article published in 2017

Soil Bacterial Diversity Is Associated with Human Population Density in Urban Greenspaces

scientific article published on 12 April 2018

Spatial Compartmentalization of the Microbiome between the Lumen and Crypts Is Lost in the Murine Cecum following the Process of Surgery, Including Overnight Fasting and Exposure to Antibiotics

scientific article published on 09 June 2020

Spatial and temporal variations in indoor environmental conditions, human occupancy, and operational characteristics in a new hospital building

scientific article

Spatial scale drives patterns in soil bacterial diversity.

scientific article published on 23 February 2016

Specific Signatures of the Gut Microbiota and Increased Levels of Butyrate in Children Treated with Fermented Cow's Milk Containing Heat-Killed Lactobacillus paracasei CBA L74.

scientific article published on 21 July 2017

Structure, fluctuation and magnitude of a natural grassland soil metagenome.

scientific article

Studying the microbiology of the indoor environment ⬇️

scientific article published on February 28, 2013

Subsampled open-reference clustering creates consistent, comprehensive OTU definitions and scales to billions of sequences

scientific article

Survey data are still vital to science

scientific article published in January 2011

Synchrony and idiosyncrasy in the gut microbiome of wild baboons

scientific article published in June 2022

Systems biology of the human microbiome

scientific article published on 13 February 2018

Temporal patterns of rarity provide a more complete view of microbial diversity

scientific article published on 6 February 2015

Ten questions concerning the microbiomes of buildings

The ASM Journals Committee Values the Contributions of Black Microbiologists

scientific article published on 31 July 2020

The ASM Journals Committee Values the Contributions of Black Microbiologists

scientific article published on 01 July 2020

The ASM Journals Committee Values the Contributions of Black Microbiologists

scholarly article published in 2020

The Earth Microbiome Project: Meeting report of the "1 EMP meeting on sample selection and acquisition" at Argonne National Laboratory October 6 2010.

scientific article

The Earth Microbiome Project: The Meeting Report for the 1st International Earth Microbiome Project Conference, Shenzhen, China, June 13th-15th 2011.

scientific article published on 22 November 2011

The Earth Microbiome project: successes and aspirations

scientific article

The Future of Microbiome-Based Therapeutics in Clinical Applications

scientific article published on 16 October 2019

The Genomic Standards Consortium

scientific article (publication date: June 2011)

The Hospital Microbiome Project: Meeting Report for the 1st Hospital Microbiome Project Workshop on sampling design and building science measurements, Chicago, USA, June 7th-8th 2012.

scientific article published on 15 April 2013

The Hospital Microbiome Project: Meeting report for the 2nd Hospital Microbiome Project, Chicago, USA, January 15(th), 2013.

scientific article

The Influence of Age and Gender on Skin-Associated Microbial Communities in Urban and Rural Human Populations

scientific article published on 28 October 2015

The Oral and Skin Microbiomes of Captive Komodo Dragons Are Significantly Shared with Their Habitat

scientific article published on July 2016

The Origin, Succession, and Predicted Metabolism of Bacterial Communities Associated with Leaf Decomposition

scientific article published on 03 September 2019

The Western English Channel contains a persistent microbial seed bank

scientific article

The antibiotic resistome of swine manure is significantly altered by association with the Musca domestica larvae gut microbiome

scientific article

The chemodiversity of paddy soil dissolved organic matter correlates with microbial community at continental scales

scientific article published on 19 October 2018

The complete genome sequence for putative H₂- and S-oxidizer Candidatus Sulfuricurvum sp., assembled de novo from an aquifer-derived metagenome

scientific article

The emergence of microbiome centres

scientific article published on 01 January 2020

The first RSBI (ISA-TAB) workshop: "can a simple format work for complex studies?".

scientific article

The founding charter of the Genomic Observatories Network

scientific article published on 7 March 2014

The future of microbial metagenomics (or is ignorance bliss?).

scientific article

The genomic standards consortium: bringing standards to life for microbial ecology

scientific article (publication date: October 2011)

The gut of geographically disparate Ciona intestinalis harbors a core microbiota.

scientific article

The hospital microbiome project: meeting report for the UK science and innovation network UK-USA workshop ‘beating the superbugs: hospital microbiome studies for tackling antimicrobial resistance’, October 14th 2013

article

The human microbiome: an emerging tool in forensics

scientific article published on March 2017

The human microbiota is associated with cardiometabolic risk across the epidemiologic transition

scientific article published on 24 July 2019

The importance of metagenomic surveys to microbial ecology: or why Darwin would have been a metagenomic scientist ⬇️

scientific article published on June 14, 2011

The microbial nitrogen cycling potential is impacted by polyaromatic hydrocarbon pollution of marine sediments.

scientific article published on 25 March 2014

The microbiome as a source of new enterprises and job creation: Considering clinical faecal and synthetic microbiome transplants and therapeutic regulation

scientific article published on 4 January 2017

The minimum information about a genome sequence (MIGS) specification

scientific article

The ocean sampling day consortium

scientific article published in 2015

The phenological stage of rice growth determines anaerobic ammonium oxidation activity in rhizosphere soil

scholarly article by Hu Li et al published September 2016 in Soil Biology and Biochemistry

The role of macrobiota in structuring microbial communities along rocky shores

scientific article

The role of the commensal microbiota in the regulation of tolerance to dietary allergens

scientific article

The seasonal structure of microbial communities in the Western English Channel

scientific article published on 31 July 2009

The short-chain fatty acid receptor, FFA2, contributes to gestational glucose homeostasis

scientific article published on 22 September 2015

The soil microbiome influences grapevine-associated microbiota

scientific article published on 24 March 2015

The taxonomic and functional diversity of microbes at a temperate coastal site: a 'multi-omic' study of seasonal and diel temporal variation

scientific article

The urgent need for microbiology literacy in society

scientific article published on 11 April 2019

The “Minimum Information about an ENvironmental Sequence” (MIENS) specification

The “Minimum Information about an ENvironmental Sequence” (MIENS) specification

Tools for the Microbiome: Nano and Beyond

scientific article published on 22 December 2015

Toward effective probiotics for autism and other neurodevelopmental disorders

scientific article

Toward interoperable bioscience data

scientific article (publication date: 27 January 2012)

Toward unrestricted use of public genomic data:

scientific article

Towards large-cohort comparative studies to define the factors influencing the gut microbial community structure of ASD patients

scientific article

Triplicate PCR reactions for 16S rRNA gene amplicon sequencing are unnecessary

scientific article published on 24 May 2019

Understanding cultivar-specificity and soil determinants of the cannabis microbiome

scientific article

Understanding grapevine-microbiome interactions: implications for viticulture industry

scientific article published on 04 May 2015

Unlocking the potential of metagenomics through replicated experimental design

scientific article published on 7 June 2012

Using corticosteroids to reshape the gut microbiome: implications for inflammatory bowel diseases

scientific article

Variation in Survival and Gut Microbiome Composition of Hatchery-Grown Native Oysters at Various Locations within the Puget Sound

scientific article published in 2022

Western Diet Promotes Intestinal Colonization by Collagenolytic Microbes and Promotes Tumor Formation After Colorectal Surgery

scientific article published on 23 October 2019

Whole-genome sequence of the human pathogen Legionella pneumophila serogroup 12 strain 570-CO-H.

scientific article published on March 2012

Whole-grain wheat consumption reduces inflammation in a randomized controlled trial on overweight and obese subjects with unhealthy dietary and lifestyle behaviors: role of polyphenols bound to cereal dietary fiber

scientific article published on 3 December 2014

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