List of works by Gary A Churchill

A Cmv2 QTL on chromosome X affects MCMV resistance in New Zealand male mice

scientific article

A general Bayesian approach to analyzing diallel crosses of inbred strains

scientific article published on February 2012

A large-scale genome-lipid association map guides lipid identification

scientific article published on 21 September 2020

A multi-megabase copy number gain causes maternal transmission ratio distortion on mouse chromosome 2

scientific article

Accessing Data Resources in the Mouse Phenome Database for Genetic Analysis of Murine Life Span and Health Span

scientific article

Aging Research Using Mouse Models.

scientific article

Aging in inbred strains of mice: study design and interim report on median lifespans and circulating IGF1 levels

scientific article published on 09 April 2009

CGDSNPdb: a database resource for error-checked and imputed mouse SNPs

scientific article

Chromosome Y variants from different inbred mouse strains are linked to differences in the morphologic and molecular responses of cardiac cells to postpubertal testosterone

scientific article

Cleaning Genotype Data from Diversity Outbred Mice

scientific article published on 07 May 2019

Collaborative Cross and Diversity Outbred data resources in the Mouse Phenome Database

scientific article

Combining data from multiple inbred line crosses improves the power and resolution of quantitative trait loci mapping

scientific article

Coordinated Expression Domains in Mammalian Genomes ⬇️

scientific article published on August 18, 2010

Defining the consequences of genetic variation on a proteome-wide scale.

scientific article published on 15 June 2016

Discovery of novel variants in genotyping arrays improves genotype retention and reduces ascertainment bias.

scientific article

Diversity Outbred Mice Identify Population-Based Exposure Thresholds and Genetic Factors that Influence Benzene-Induced Genotoxicity.

scientific article

Doxorubicin-Induced Cardiotoxicity in Collaborative Cross (CC) Mice Recapitulates Individual Cardiotoxicity in Humans

scientific article published on 08 August 2019

Epistasis contributes to the genetic buffering of plasma HDL cholesterol in mice ⬇️

scientific article published on September 21, 2010

Epistatic Networks Jointly Influence Phenotypes Related to Metabolic Disease and Gene Expression in Diversity Outbred Mice.

scientific article

Evidence of a large-scale functional organization of mammalian chromosomes

scientific article

Fundamentals of experimental design for cDNA microarrays

scientific article

Genetic Analysis of Substrain Divergence in Non-Obese Diabetic (NOD) Mice

scientific article published on 3 March 2015

Genetic Architectures of Quantitative Variation in RNA Editing Pathways

scientific article published on 27 November 2015

Genetic Drivers of Pancreatic Islet Function

article

Genetic Regulation of Female Sexual Maturation and Longevity Through Circulating IGF1

scientific article

Genetic analysis of blood pressure in 8 mouse intercross populations

scientific article

Genetic identification of thiosulfate sulfurtransferase as an adipocyte-expressed antidiabetic target in mice selected for leanness.

scientific article

Genetic properties of the MAGIC maize population: a new platform for high definition QTL mapping in Zea mays

scientific article

Genetic regulation of Zfp30, CXCL1, and neutrophilic inflammation in murine lung.

scientific article

Genome Wide Identification of SARS-CoV Susceptibility Loci Using the Collaborative Cross

scientific article published on 9 October 2015

Genomes of the Mouse Collaborative Cross

scientific article

Gonadal sex reversal in mutant Dax1 XY mice: a failure to upregulate Sox9 in pre-Sertoli cells

scientific article

High-Density Genotypes of Inbred Mouse Strains: Improved Power and Precision of Association Mapping

scientific article

High-fat diet leads to tissue-specific changes reflecting risk factors for diseases in DBA/2J mice

scientific article

High-resolution genetic mapping using the Mouse Diversity outbred population

scientific article published on February 2012

High-resolution sex-specific linkage maps of the mouse reveal polarized distribution of crossovers in male germline

scientific article

High-throughput sleep phenotyping produces robust and heritable traits in Diversity Outbred mice and their founder strains

scientific article published on 19 February 2020

IBI* series winner. Students as collaborators in systems biology research

scientific article

Integration of mouse and human genome-wide association data identifies KCNIP4 as an asthma gene

scientific article (publication date: 2013)

Integrative genetic analysis of allergic inflammation in the murine lung

scientific article

Misexpression of genes lacking CpG islands drives degenerative changes during aging

scientific article published on 15 December 2021

Modeling host genetic regulation of influenza pathogenesis in the collaborative cross

scientific article (publication date: February 2013)

Nine quick tips for efficient bioinformatics curriculum development and training

scientific article published on 23 July 2020

Pla2g12b and Hpn are genes identified by mouse ENU mutagenesis that affect HDL cholesterol

scientific journal article

Pleiotropy, homeostasis, and functional networks based on assays of cardiovascular traits in genetically randomized populations

scientific article

Precise genetic mapping and integrative bioinformatics in Diversity Outbred mice reveals Hydin as a novel pain gene

scientific article

Prediction performance of linear models and gradient boosting machine on complex phenotypes in outbred mice

scientific article published in 2022

Proteotypic classification of spontaneous and transgenic mammary neoplasms

scientific article

QTLViewer: an interactive webtool for genetic analysis in the Collaborative Cross and Diversity Outbred mouse populations

scientific article published in 2022

Quantitative trait locus mapping methods for diversity outbred mice

scientific article

R/qtl2: Software for Mapping Quantitative Trait Loci with High-Dimensional Data and Multiparent Populations

article

R/qtl2: software for mapping quantitative trait loci with high dimensional data and multi-parent populations

R2d2 Drives Selfish Sweeps in the House Mouse

scientific article published on 15 February 2016

RNA-Seq alignment to individualized genomes improves transcript abundance estimates in multiparent populations.

scientific article

Randomization in laboratory procedure is key to obtaining reproducible microarray results

scientific article

Regulation of protein abundance in genetically diverse mouse populations

scientific article published in 2021

Sensitivity to hepatotoxicity due to epigallocatechin gallate is affected by genetic background in diversity outbred mice

scientific article

Sequence variation at multiple loci influences red cell hemoglobin concentration

scientific article

Sex-specific phenotypic effects and evolutionary history of an ancient polymorphic deletion of the human growth hormone receptor

scientific article published on 24 September 2021

Spontaneous voiding by mice reveals strain-specific lower urinary tract function to be a quantitative genetic trait

scientific article

Statistical tests for differential expression in cDNA microarray experiments

scientific article

Stochastic variation of transcript abundance in C57BL/6J mice

scientific article

Structural model analysis of multiple quantitative traits

scientific article

The Diversity Outbred mouse population.

scientific article

The mouse as a model for human biology: a resource guide for complex trait analysis

scientific article published on January 2007

Transformations for cDNA microarray data.

scientific article

Using ANOVA to analyze microarray data

scientific article

Using advanced intercross lines for high-resolution mapping of HDL cholesterol quantitative trait loci

scientific article

What are microarrays teaching us about sleep?

scientific article

What can causal networks tell us about metabolic pathways?

scientific article

When are results too good to be true?

scientific article

Paulina is supported by:

About Paulina

Help