List of works by Brian J Raney

28-way vertebrate alignment and conservation track in the UCSC Genome Browser

scientific article (publication date: December 2007)

A high-resolution map of human evolutionary constraint using 29 mammals

scientific article

Alignathon: a competitive assessment of whole-genome alignment methods

scientific article

Author Correction: Comparative and demographic analysis of orang-utan genomes

correction of a scholarly article

Author Correction: Elephant shark genome provides unique insights into gnathostome evolution

scientific article published on 19 November 2020

Building a pan-genome reference for a population

scientific article published on 7 January 2015

Chromosome assembly of large and complex genomes using multiple references

scientific article published on 19 October 2018

Comment on "Protein sequences from mastodon and Tyrannosaurus rex revealed by mass spectrometry"

scientific article (publication date: 4 January 2008)

Comparative and demographic analysis of orang-utan genomes

scientific article

Comparative assembly hubs: web-accessible browsers for comparative genomics

scientific article published on 18 August 2014

Comparing the survival of osteocalcin and mtDNA in archaeological bone from four European sites

scholarly article by Michael Buckley published in June 2008

Convergent evolution of the genomes of marine mammals

scientific article published on 26 January 2015

Corrigendum: Whole genome analysis of a schistosomiasis-transmitting freshwater snail

scientific article published on 23 August 2017

DUPCAR: reconstructing contiguous ancestral regions with duplications

scientific article

ENCODE whole-genome data in the UCSC Genome Browser

scientific article

ENCODE whole-genome data in the UCSC Genome Browser: update 2012.

scientific article

ENCODE whole-genome data in the UCSC genome browser (2011 update)

scientific article

Elephant shark genome provides unique insights into gnathostome evolution

scientific article (publication date: 9 January 2014)

Erratum: Corrigendum: Elephant shark genome provides unique insights into gnathostome evolution

scientific article published in Nature

Evolutionary and Biomedical Insights from the Rhesus Macaque Genome

scientific article

Navigating protected genomics data with UCSC Genome Browser in a Box.

scientific article

Ragout-a reference-assisted assembly tool for bacterial genomes

scientific article

Reconstructing contiguous regions of an ancestral genome

scientific article

Sequence and comparative analysis of the chicken genome provide unique perspectives on vertebrate evolution

scientific article

Sequencing the nuclear genome of the extinct woolly mammoth

scientific article

Sequencing three crocodilian genomes to illuminate the evolution of archosaurs and amniotes

scientific article

The ENCODE Project at UC Santa Cruz

scientific article

The UCSC Ebola Genome Portal

scientific article published on 7 November 2014

The UCSC Genome Browser database: 2014 update

scientific article

The UCSC Genome Browser database: 2015 update

scientific article

The UCSC Genome Browser database: 2016 update

scientific article

The UCSC Genome Browser database: 2017 update

scientific article

The UCSC Genome Browser database: 2018 update

scientific article published on 2 November 2017

The UCSC Genome Browser database: 2019 update

scientific article published on 01 January 2019

The UCSC Genome Browser database: 2021 update

scientific article published on 22 November 2020

The UCSC Genome Browser database: extensions and updates 2011.

scientific article

The UCSC Genome Browser database: extensions and updates 2013.

scientific article

The UCSC Genome Browser database: update 2010

scientific article (publication date: 2010)

The UCSC Genome Browser database: update 2011

scientific article

The UCSC SARS-CoV-2 Genome Browser

scientific article published on 05 May 2020

The UCSC SARS-CoV-2 Genome Browser

scientific article published on 09 September 2020

The genome of the vervet (Chlorocebus aethiops sabaeus)

scientific article published on 16 September 2015

The infinite sites model of genome evolution

scholarly article

The western painted turtle genome, a model for the evolution of extreme physiological adaptations in a slowly evolving lineage.

scientific article

Three periods of regulatory innovation during vertebrate evolution

scientific article

Track data hubs enable visualization of user-defined genome-wide annotations on the UCSC Genome Browser

scientific article

UCSC Cell Browser: visualize your single-cell data

scientific article

UCSC Data Integrator and Variant Annotation Integrator

scientific article published on 6 January 2016

UCSC Genome Browser enters 20th year

scientific article published on 01 January 2020

Variant interpretation: UCSC Genome Browser Recommended Track Sets

scientific article published on 28 January 2022

Whole genome analysis of a schistosomiasis-transmitting freshwater snail.

scientific article published on 16 May 2017