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List of works by Fernando Calamante

A Newly Identified Frontal Path from Fornix in Septum Pellucidum with 7.0T MRI Track Density Imaging (TDI) - The Septum Pellucidum Tract (SPT)

scientific article published on 27 November 2015

A Novel Group-Fused Sparse Partial Correlation Method for Simultaneous Estimation of Functional Networks in Group Comparison Studies.

scientific article published on 29 December 2017

A Novel Method for Extracting Hierarchical Functional Subnetworks Based on a Multisubject Spectral Clustering Approach

scientific article published on 23 April 2019

A generalised framework for super-resolution track-weighted imaging

scientific article published on 8 September 2011

A k-space sharing 3D GRASE pseudocontinuous ASL method for whole-brain resting-state functional connectivity

A novel joint sparse partial correlation method for estimating group functional networks

scientific article published on 21 December 2015

A software tool to generate simulated white matter structures for the assessment of fibre-tracking algorithms

scientific article published on 8 April 2009

A variable flip angle-based method for reducing blurring in 3D GRASE ASL.

scientific article

Acute Stroke Imaging Research Roadmap II.

scientific article

Analysis of perfusion MRI in stroke: To deconvolve, or not to deconvolve

scientific article published on 31 October 2015

Anatomically-constrained tractography: improved diffusion MRI streamlines tractography through effective use of anatomical information

scientific article published on 13 June 2012

Arterial Spin-Labeling Improves Detection of Intracranial Dural Arteriovenous Fistulas with MRI

scientific article published on 15 March 2018

Bolus delay and dispersion in perfusion MRI: implications for tissue predictor models in stroke

scientific article published in May 2006

Characterization of white matter asymmetries in the healthy human brain using diffusion MRI fixel-based analysis

scientific article published on 01 November 2020

Comment on time-varying eddy currents effects on diffusion-weighting echo-planar imaging

scientific article

Connectomes from streamlines tractography: Assigning streamlines to brain parcellations is not trivial but highly consequential

scientific article published on 11 May 2019

Contralateral cerebello-thalamo-cortical pathways with prominent involvement of associative areas in humans in vivo.

scientific article

Contralateral cortico-ponto-cerebellar pathways reconstruction in humans in vivo: implications for reciprocal cerebro-cerebellar structural connectivity in motor and non-motor areas

scientific article published on 9 October 2017

Contrast agent concentration measurements affecting quantification of bolus-tracking perfusion MRI.

scientific article published in September 2007

Correction for diffusion MRI fibre tracking biases: The consequences for structural connectomic metrics

scientific article published on 19 May 2016

Cortical abnormalities and language function in young patients with basal ganglia stroke

scientific article

Determination of the appropriate b value and number of gradient directions for high-angular-resolution diffusion-weighted imaging

scientific article published on 29 August 2013

Diffusion-weighted magnetic resonance imaging fibre tracking using a front evolution algorithm

scientific article published in September 2003

Direct estimation of the fiber orientation density function from diffusion-weighted MRI data using spherical deconvolution

scientific article

Enhanced characterization of the zebrafish brain as revealed by super-resolution track-density imaging

scientific article

Fourier Tract Sampling (FouTS): A framework for improved inference of white matter tracts from diffusion MRI by explicitly modelling tract volume.

scientific article published on 9 June 2015

Gadolinium deposition in the brain: summary of evidence and recommendations

scientific article

Graph analysis of resting-state ASL perfusion MRI data: nonlinear correlations among CBF and network metrics

scientific article

Improved deconvolution of perfusion MRI data in the presence of bolus delay and dispersion

scientific article

Improved partial volume correction for single inversion time arterial spin labeling data

scientific article

Increased cerebral blood flow with increased amyloid burden in the preclinical phase of alzheimer's disease

scientific article published on 30 May 2019

Is quantification of bolus tracking MRI reliable without deconvolution? ⬇️

scientific article published on January 1, 2002

Is removal of weak connections necessary for graph-theoretical analysis of dense weighted structural connectomes from diffusion MRI?

scientific article published on 04 March 2019

MR system operator: recommended minimum requirements for performing MRI in human subjects in a research setting

scientific article

MRtrix: Diffusion tractography in crossing fiber regions

Mapping connectomes with diffusion MRI: Deterministic or probabilistic tractography?

scientific article published on 11 August 2019

Mapping somatosensory connectivity in adult mice using diffusion MRI tractography and super-resolution track density imaging

scientific article published on August 2014

Mouse Brain Kaleidoscope ⬇️

scientific article published on October 23, 2012

New anatomic MRI techniques

scientific article published in February 2010

New criterion to aid manual and automatic selection of the arterial input function in dynamic susceptibility contrast MRI

scientific article published on 16 November 2010

Nonlinear DeltaR*2 effects in perfusion quantification using bolus-tracking MRI.

scientific article published on February 2009

Notes on "A cautionary note on the use of SIFT in pathological connectomes"

scientific article published on 27 July 2020

Perfusion magnetic resonance abnormalities in patients with sickle cell disease

Perfusion precision in bolus-tracking MRI: estimation using the wild-bootstrap method

scientific article

Periventricular Nodular Heterotopia: Detection of Abnormal Microanatomic Fiber Structures with Whole-Brain Diffusion MR Imaging Tractography

scientific article published on 29 June 2016

Pictorial review of in vivo human brain: from anatomy to molecular imaging

scientific article

Quantification of bolus-tracking MRI: Improved characterization of the tissue residue function using Tikhonov regularization

scientific article published in December 2003

Quantification of track-weighted imaging (TWI): characterisation of within-subject reproducibility and between-subject variability

scientific article published on 16 November 2013

Quantification of voxel-wise total fibre density: Investigating the problems associated with track-count mapping

scientific article

Reduction of errors in ASL cerebral perfusion and arterial transit time maps using image de-noising

scientific article

Reproducibility of multiphase pseudo-continuous arterial spin labeling and the effect of post-processing analysis methods

scientific article published on 27 May 2015

Resolving crossing fibres using constrained spherical deconvolution: validation using diffusion-weighted imaging phantom data

scientific article

Robust Identification of Rich-Club Organization in Weighted and Dense Structural Connectomes

scientific article published on 03 July 2018

Robust determination of the fibre orientation distribution in diffusion MRI: non-negativity constrained super-resolved spherical deconvolution

scientific article published on 21 February 2007

SIFT2: Enabling dense quantitative assessment of brain white matter connectivity using streamlines tractography

scientific article published on 8 July 2015

SIFT: Spherical-deconvolution informed filtering of tractograms

scientific article published on 11 December 2012

Sickle cell disease and electroencephalogram hyperventilation

scientific article published on 01 January 2006

Sickle cell disease: ischemia and seizures

scientific article published in August 2005

Super-resolution track-density imaging of thalamic substructures: comparison with high-resolution anatomical magnetic resonance imaging at 7.0T.

scientific article published on 14 November 2012

Super-resolution track-density imaging studies of mouse brain: comparison to histology

scientific article published on 14 July 2011

The 39 steps: evading error and deciphering the secrets for accurate dynamic susceptibility contrast MRI.

scientific article

The Seven Deadly Sins of Measuring Brain Structural Connectivity Using Diffusion MRI Streamlines Fibre-Tracking

scientific article published on 06 September 2019

The contribution of geometry to the human connectome

scientific article published on 11 September 2015

The effect of finite diffusion gradient pulse duration on fibre orientation estimation in diffusion MRI.

scientific article published on 24 February 2010

The effects of SIFT on the reproducibility and biological accuracy of the structural connectome

scientific article published on 12 October 2014

The physiological significance of the time-to-maximum (Tmax) parameter in perfusion MRI.

scientific article published on 22 April 2010

The role of bolus delay and dispersion in predictor models for stroke

scientific article published on 16 February 2012

The role of whole-brain diffusion MRI as a tool for studying human in vivo cortical segregation based on a measure of neurite density

scientific article

Track density imaging (TDI): validation of super resolution property

scientific article published on 24 February 2011

Track-density imaging (TDI): super-resolution white matter imaging using whole-brain track-density mapping

scientific article published on 17 July 2010

Track-weighted dynamic functional connectivity (TW-dFC): a new method to study time-resolved functional connectivity

scientific article published on 26 April 2017

Track-weighted functional connectivity (TW-FC): a tool for characterizing the structural-functional connections in the brain.

scientific article published on 5 January 2013

Track-weighted imaging methods: extracting information from a streamlines tractogram.

scientific article

Tractography dissection variability: What happens when 42 groups dissect 14 white matter bundles on the same dataset?

Validating a local Arterial Input Function method for improved perfusion quantification in stroke

scientific article published on June 2011

Visualization of mouse barrel cortex using ex-vivo track density imaging

scientific article published on 21 September 2013

Voxel-Wise Functional Connectomics Using Arterial Spin Labeling Functional Magnetic Resonance Imaging: The Role of Denoising.

scientific article published on 28 May 2015

White matter fiber tractography: why we need to move beyond DTI.

scientific article

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