List of works - Darren Soanes

A SUF Fe-S cluster biogenesis system in the mitochondrion-related organelles of the anaerobic protist Pygsuia

scientific article published on 22 May 2014

A bioinformatic tool for analysis of EST transcript abundance during infection-related development by Magnaporthe grisea

scientific article

A relational database for the discovery of genes encoding amino acid biosynthetic enzymes in pathogenic fungi

scientific article published on January 2003

A sensor kinase controls turgor-driven plant infection by the rice blast fungus

scientific article published on 09 October 2019

A single fungal MAP kinase controls plant cell-to-cell invasion by the rice blast fungus.

scientific article

CRISPR-Cas9 ribonucleoprotein-mediated co-editing and counterselection in the rice blast fungus

scientific article published in Scientific Reports

CRISPR-Cas9 ribonucleoprotein-mediated co-editing and counterselection in the rice blast fungus

Cautionary Notes on Use of the MoT3 Diagnostic Assay for Magnaporthe oryzae Wheat and Rice Blast Isolates

article published in 2018

Characterization of MoLDB1 required for vegetative growth, infection-related morphogenesis, and pathogenicity in the rice blast fungus Magnaporthe oryzae

scientific article published in October 2010

Comparative genome analysis across a kingdom of eukaryotic organisms: specialization and diversification in the fungi

scientific article

Comparative genome analysis of filamentous fungi reveals gene family expansions associated with fungal pathogenesis

scientific article

Comparative genome analysis reveals an absence of leucine-rich repeat pattern-recognition receptor proteins in the kingdom Fungi

scientific article

Comparative genomic analysis of the 'pseudofungus' Hyphochytrium catenoides.

scientific article published in January 2018

Comparative genomics of MAP kinase and calcium-calcineurin signalling components in plant and human pathogenic fungi.

scientific article published on 07 February 2009

Conidial Morphogenesis and Septin-Mediated Plant Infection Require Smo1, a Ras GTPase-Activating Protein in Magnaporthe oryzae

scientific article published on 16 November 2018

Emergence of wheat blast in Bangladesh was caused by a South American lineage of Magnaporthe oryzae

scientific article

Emergence of wheat blast in Bangladesh was caused by a South American lineage of Magnaporthe oryzae

Expansion of Signal Transduction Pathways in Fungi by Extensive Genome Duplication

scientific article

Extreme genome diversity in the hyper-prevalent parasitic eukaryote Blastocystis.

scientific article published on 11 September 2017

FAR1 and FAR2 regulate the expression of genes associated with lipid metabolism in the rice blast fungus Magnaporthe oryzae

scientific article

Functional Genomic Analysis of the Rice Blast Fungus Magnaporthe grisea

Functional analysis of lipid metabolism in Magnaporthe grisea reveals a requirement for peroxisomal fatty acid beta-oxidation during appressorium-mediated plant infection

scientific article published in May 2007

Functional genomics of plant infection by the rice blast fungus Magnaporthe grisea

article

Gene Flow between Divergent Cereal- and Grass-Specific Lineages of the Rice Blast Fungus Magnaporthe oryzae.

scientific article published on 27 February 2018

Gene flow between divergent cereal- and grass-specific lineages of the rice blast fungus Magnaporthe oryzae

article

Gene transfer into the fungi

article

Genome Expansion and Gene Loss in Powdery Mildew Fungi Reveal Tradeoffs in Extreme Parasitism

scientific article published in Science

Genome-wide transcriptional profiling of appressorium development by the rice blast fungus Magnaporthe oryzae

scientific article

Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea

scientific article

Genomics of phytopathogenic fungi and the development of bioinformatic resources

scientific article

Hook is an adapter that coordinates kinesin-3 and dynein cargo attachment on early endosomes

scientific article

Horizontal gene transfer facilitated the evolution of plant parasitic mechanisms in the oomycetes

scientific article

Horizontal gene transfer in eukaryotic plant pathogens.

scientific article published on January 2014

Identifying the emerging human pathogen Scedosporium prolificans by using a species-specific monoclonal antibody that binds to the melanin biosynthetic enzyme tetrahydroxynaphthalene reductase

scientific article published on 7 May 2014

Infection-associated nuclear degeneration in the rice blast fungus Magnaporthe oryzae requires non-selective macro-autophagy

scientific article published on 20 March 2012

Insights from sequencing fungal and oomycete genomes: what can we learn about plant disease and the evolution of pathogenicity?

article

Moving targets: rapid evolution of oomycete effectors

Peroxisomal carnitine acetyl transferase is required for elaboration of penetration hyphae during plant infection by Magnaporthe grisea

scientific article published in July 2006

Phylogenomic analysis demonstrates a pattern of rare and ancient horizontal gene transfer between plants and fungi

scientific article published on 7 July 2009

Protein kinase C is essential for viability of the rice blast fungus Magnaporthe oryzae

scientific article

Regulation of theMPG1Hydrophobin Gene in the Rice Blast Fungus Magnaporthe grisea

article

Resolving the question of trypanosome monophyly: a comparative genomics approach using whole genome data sets with low taxon sampling

scientific article

Saprotrophic competitiveness and biocontrol fitness of a genetically modified strain of the plant-growth-promoting fungus Trichoderma hamatum GD12.

scientific article

The MoT3 assay does not distinguish between Magnaporthe oryzae wheat and rice blast isolates from Bangladesh

The genome of Spraguea lophii and the basis of host-microsporidian interactions

scientific article

The genome sequence of the rice blast fungus Magnaporthe grisea

scientific article

The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata

scientific article published on 23 July 2019

The role of horizontal gene transfer in the evolution of trophic mechanisms across the eukaryotes

article

The β-1,3-glucanosyltransferases (Gels) affect the structure of the rice blast fungal cell wall during appressorium-mediated plant infection

scientific article published on 29 August 2016

Tpc1 is an important Zn(II)2Cys6 transcriptional regulator required for polarized growth and virulence in the rice blast fungus.

scientific article

e-Fungi: a data resource for comparative analysis of fungal genomes

scientific article

List of works by Darren Soanes

A SUF Fe-S cluster biogenesis system in the mitochondrion-related organelles of the anaerobic protist Pygsuia

A bioinformatic tool for analysis of EST transcript abundance during infection-related development by Magnaporthe grisea

A relational database for the discovery of genes encoding amino acid biosynthetic enzymes in pathogenic fungi

A sensor kinase controls turgor-driven plant infection by the rice blast fungus

A single fungal MAP kinase controls plant cell-to-cell invasion by the rice blast fungus.

CRISPR-Cas9 ribonucleoprotein-mediated co-editing and counterselection in the rice blast fungus

CRISPR-Cas9 ribonucleoprotein-mediated co-editing and counterselection in the rice blast fungus

Cautionary Notes on Use of the MoT3 Diagnostic Assay for Magnaporthe oryzae Wheat and Rice Blast Isolates

Characterization of MoLDB1 required for vegetative growth, infection-related morphogenesis, and pathogenicity in the rice blast fungus Magnaporthe oryzae

Comparative genome analysis across a kingdom of eukaryotic organisms: specialization and diversification in the fungi

Comparative genome analysis of filamentous fungi reveals gene family expansions associated with fungal pathogenesis

Comparative genome analysis reveals an absence of leucine-rich repeat pattern-recognition receptor proteins in the kingdom Fungi

Comparative genomic analysis of the 'pseudofungus' Hyphochytrium catenoides.

Comparative genomics of MAP kinase and calcium-calcineurin signalling components in plant and human pathogenic fungi.

Conidial Morphogenesis and Septin-Mediated Plant Infection Require Smo1, a Ras GTPase-Activating Protein in Magnaporthe oryzae

Emergence of wheat blast in Bangladesh was caused by a South American lineage of Magnaporthe oryzae

Emergence of wheat blast in Bangladesh was caused by a South American lineage of Magnaporthe oryzae

Expansion of Signal Transduction Pathways in Fungi by Extensive Genome Duplication

Extreme genome diversity in the hyper-prevalent parasitic eukaryote Blastocystis.

FAR1 and FAR2 regulate the expression of genes associated with lipid metabolism in the rice blast fungus Magnaporthe oryzae

Functional Genomic Analysis of the Rice Blast Fungus Magnaporthe grisea

Functional analysis of lipid metabolism in Magnaporthe grisea reveals a requirement for peroxisomal fatty acid beta-oxidation during appressorium-mediated plant infection

Functional genomics of plant infection by the rice blast fungus Magnaporthe grisea

Gene Flow between Divergent Cereal- and Grass-Specific Lineages of the Rice Blast Fungus Magnaporthe oryzae.

Gene flow between divergent cereal- and grass-specific lineages of the rice blast fungus Magnaporthe oryzae

Gene transfer into the fungi

Genome Expansion and Gene Loss in Powdery Mildew Fungi Reveal Tradeoffs in Extreme Parasitism

Genome-wide transcriptional profiling of appressorium development by the rice blast fungus Magnaporthe oryzae

Genomic analysis of the necrotrophic fungal pathogens Sclerotinia sclerotiorum and Botrytis cinerea

Genomics of phytopathogenic fungi and the development of bioinformatic resources

Hook is an adapter that coordinates kinesin-3 and dynein cargo attachment on early endosomes

Horizontal gene transfer facilitated the evolution of plant parasitic mechanisms in the oomycetes

Horizontal gene transfer in eukaryotic plant pathogens.

Identifying the emerging human pathogen Scedosporium prolificans by using a species-specific monoclonal antibody that binds to the melanin biosynthetic enzyme tetrahydroxynaphthalene reductase

Infection-associated nuclear degeneration in the rice blast fungus Magnaporthe oryzae requires non-selective macro-autophagy

Insights from sequencing fungal and oomycete genomes: what can we learn about plant disease and the evolution of pathogenicity?

Moving targets: rapid evolution of oomycete effectors

Peroxisomal carnitine acetyl transferase is required for elaboration of penetration hyphae during plant infection by Magnaporthe grisea

Phylogenomic analysis demonstrates a pattern of rare and ancient horizontal gene transfer between plants and fungi

Protein kinase C is essential for viability of the rice blast fungus Magnaporthe oryzae

Regulation of theMPG1Hydrophobin Gene in the Rice Blast Fungus Magnaporthe grisea

Resolving the question of trypanosome monophyly: a comparative genomics approach using whole genome data sets with low taxon sampling

Saprotrophic competitiveness and biocontrol fitness of a genetically modified strain of the plant-growth-promoting fungus Trichoderma hamatum GD12.

The MoT3 assay does not distinguish between Magnaporthe oryzae wheat and rice blast isolates from Bangladesh

The genome of Spraguea lophii and the basis of host-microsporidian interactions

The genome sequence of the rice blast fungus Magnaporthe grisea

The lichen symbiosis re-viewed through the genomes of Cladonia grayi and its algal partner Asterochloris glomerata

The role of horizontal gene transfer in the evolution of trophic mechanisms across the eukaryotes

The β-1,3-glucanosyltransferases (Gels) affect the structure of the rice blast fungal cell wall during appressorium-mediated plant infection

Tpc1 is an important Zn(II)2Cys6 transcriptional regulator required for polarized growth and virulence in the rice blast fungus.

e-Fungi: a data resource for comparative analysis of fungal genomes