List of works by John Anthony Gerard Scott

10-valent pneumococcal non-typeable Haemophilus influenzae protein-D conjugate vaccine (PHiD-CV) induces memory B cell responses in healthy Kenyan toddlers.

scientific article published on 10 June 2015

A Mal functional variant is associated with protection against invasive pneumococcal disease, bacteremia, malaria and tuberculosis

scientific journal article

A bibliometric analysis of systematic reviews on vaccines and immunisation.

scientific article published on 22 March 2018

A defunctioning polymorphism in FCGR2B is associated with protection against malaria but susceptibility to systemic lupus erythematosus

scientific article

A literature review and survey of childhood pneumonia etiology studies: 2000-2010

scientific article

A preliminary study of pneumonia etiology among hospitalized children in Kenya

scientific article published in April 2012

AMR Surveillance in low and middle-income settings - A roadmap for participation in the Global Antimicrobial Surveillance System (GLASS).

scientific article published on 26 September 2017

Added value of an oropharyngeal swab in detection of viruses in children hospitalized with lower respiratory tract infection

scientific article

Addressing the Analytic Challenges of Cross-Sectional Pediatric Pneumonia Etiology Data

scientific article

Age-specific immunoglobulin g (IgG) and IgA to pneumococcal protein antigens in a population in coastal kenya

scientific article

Agreement between ELISA and plaque reduction neutralisation assay in Detection of respiratory syncytial virus specific antibodies in a birth Cohort from Kilifi, coastal Kenya

scientific article published on 18 February 2019

Assessing The Efficiency Of Catch-Up Campaigns For Introduction Of Pneumococcal Conjugate Vaccine; A Modelling Study Based On Data From Kilifi, Kenya

scholarly article published 22 March 2017

Assessing the efficiency of catch-up campaigns for the introduction of pneumococcal conjugate vaccine: a modelling study based on data from PCV10 introduction in Kilifi, Kenya

scientific article

Assessment of health benefits and cost-effectiveness of 10-valent and 13-valent pneumococcal conjugate vaccination in Kenyan children

scientific article

Association of C-Reactive Protein With Bacterial and Respiratory Syncytial Virus-Associated Pneumonia Among Children Aged <5 Years in the PERCH Study

scholarly article by Melissa M Higdon et al published 15 June 2017 in Clinical Infectious Diseases

Association of non-type b Haemophilus influenzae with HIV.

scientific article published in May 2007

Association of serotype with risk of death due to pneumococcal pneumonia: a meta-analysis

scientific article published on September 2010

Author Correction: Bacteriological diagnosis of childhood TB: a prospective observational study.

scientific article published on 3 May 2018

Bacteraemia in Kenyan children with sickle-cell anaemia: a retrospective cohort and case-control study

scientific article published on 09 September 2009

Bacteremia among children admitted to a rural hospital in Kenya

scientific article published in January 2005

Bacteriological diagnosis of childhood TB: a prospective observational study.

scientific article published on 18 September 2017

Bayesian Estimation of Pneumonia Etiology: Epidemiologic Considerations and Applications to the Pneumonia Etiology Research for Child Health Study

scientific article

Blood Pressure and Arterial Stiffness in Kenyan Adolescents With α+Thalassemia

scientific article published on 5 April 2017

Blood Pressure and Arterial Stiffness in Kenyan Adolescents with the Sickle Cell Trait

scientific article published on 12 June 2017

Breathing new life into pneumonia diagnostics

scientific article published on 09 September 2009

Burden of disease in adults admitted to hospital in a rural region of coastal Kenya: an analysis of data from linked clinical and demographic surveillance systems

scientific article

Carriage and Acquisition of Extended-spectrum β-Lactamase-producing Enterobacterales Among Neonates Admitted to Hospital in Kilifi, Kenya

scientific article published on 01 August 2019

Carriage of Staphylococcus aureus in Thika Level 5 Hospital, Kenya: a cross-sectional study

scientific article

Carriage prevalence and serotype distribution of Streptococcus pneumoniae prior to 10-valent pneumococcal vaccine introduction: A population-based cross-sectional study in South Western Uganda, 2014.

scientific article published on 4 August 2017

Case-control vaccine effectiveness studies: Data collection, analysis and reporting results

scientific article (publication date: 22 April 2017)

Case-control vaccine effectiveness studies: Preparation, design, and enrollment of cases and controls

scientific article (publication date: 22 April 2017)

Changing use of surgical antibiotic prophylaxis in Thika Hospital, Kenya: a quality improvement intervention with an interrupted time series design

scientific article

Chest Radiograph Findings in Childhood Pneumonia Cases From the Multisite PERCH Study

scholarly article by Nicholas Fancourt et al published 15 June 2017 in Clinical Infectious Diseases

Clinical and Epidemiological Implications of 24-Hour Ambulatory Blood Pressure Monitoring for the Diagnosis of Hypertension in Kenyan Adults: A Population-Based Study

scientific article published on 15 December 2016

Cohort Profile: The Kilifi Vaccine Monitoring Study

scientific article

Colonization Density of the Upper Respiratory Tract as a Predictor of Pneumonia-Haemophilus influenzae, Moraxella catarrhalis, Staphylococcus aureus, and Pneumocystis jirovecii

scholarly article by Daniel Park et al published 15 June 2017 in Clinical Infectious Diseases

Copy number, linkage disequilibrium and disease association in the FCGR locus

scientific article

Correction: Changing Use of Surgical Antibiotic Prophylaxis in Thika Hospital, Kenya: A Quality Improvement Intervention with an Interrupted Time Series Design

scientific article published on 10 December 2013

Coverage and timeliness of vaccination and the validity of routine estimates: Insights from a vaccine registry in Kenya

article

Defining childhood severe falciparum malaria for intervention studies

scientific article

Density of Upper Respiratory Colonization With Streptococcus pneumoniae and Its Role in the Diagnosis of Pneumococcal Pneumonia Among Children Aged <5 Years in the PERCH Study

scholarly article by Henry C Baggett et al published 15 June 2017 in Clinical Infectious Diseases

Detection of Pneumococcal DNA in Blood by Polymerase Chain Reaction for Diagnosing Pneumococcal Pneumonia in Young Children From Low- and Middle-Income Countries

scholarly article by Susan C Morpeth et al published 15 June 2017 in Clinical Infectious Diseases

Diagnosis of childhood tuberculosis and host RNA expression in Africa

scientific article published in May 2014

Diagnosis of invasive pneumococcal disease among children in Kenya with enzyme-linked immunosorbent assay for immunoglobulin G antibodies to pneumococcal surface adhesin A

scientific article

Diagnosis of pneumococcal pneumonia by psaA PCR analysis of lung aspirates from adult patients in Kenya

scientific article

Difference in the prevalence of hypertension using standard blood pressure measurement compared to ambulatory blood pressure monitoring in Kilifi, Kenya

scholarly article by A.O. Etyang et al published September 2013 in Artery Research

Digital auscultation in PERCH: Associations with chest radiography and pneumonia mortality in children

scientific article published on 27 August 2020

Economic evaluation of delivering Haemophilus influenzae type b vaccine in routine immunization services in Kenya

scientific article published on July 2007

Effect of 10-valent pneumococcal conjugate vaccine on the incidence of radiologically-confirmed pneumonia and clinically-defined pneumonia in Kenyan children: an interrupted time-series analysis

scientific article published on 01 March 2019

Effect of Haemophilus influenzae type b vaccination without a booster dose on invasive H influenzae type b disease, nasopharyngeal carriage, and population immunity in Kilifi, Kenya: a 15-year regional surveillance study

scientific article published on 4 February 2016

Effect of Previous Exposure to Malaria on Blood Pressure in Kilifi, Kenya: A Mendelian Randomization Study

scholarly article by Anthony O Etyang et al published 19 March 2019 in Journal of the American Heart Association: Cardiovascular and Cerebrovascular Disease

Effect of maternally-derived anti-protein and anti-capsular IgG antibodies on the rate of acquisition of nasopharyngeal carriage of pneumococcus in newborns.

scientific article published on 17 August 2017

Effect of strikes by health workers on mortality between 2010 and 2016 in Kilifi, Kenya: a population-based cohort analysis

scientific article published on 22 May 2019

Effect of ten-valent pneumococcal conjugate vaccine on invasive pneumococcal disease and nasopharyngeal carriage in Kenya: a longitudinal surveillance study.

scientific article published on 15 April 2019

Effectiveness of Haemophilus influenzae type b Conjugate vaccine introduction into routine childhood immunization in Kenya

scientific article

Effects of Sample Collection and Storage Methods on Antipneumococcal Immunoglobulin A in Saliva ⬇️

scientific article published on May 1, 2003

Effects of Vaccination with 10-Valent Pneumococcal Non-Typeable Haemophilus influenza Protein D Conjugate Vaccine (PHiD-CV) on the Nasopharyngeal Microbiome of Kenyan Toddlers

scientific article published on 17 June 2015

Enhanced diagnosis of pneumococcal meningitis with use of the Binax NOW immunochromatographic test of Streptococcus pneumoniae antigen: a multisite study

scientific article published on March 2009

Estimating rates of carriage acquisition and clearance and competitive ability for pneumococcal serotypes in Kenya with a Markov transition model

scientific article published on July 2012

Estimating the proportion of pneumonia attributable to pneumococcus in Kenyan adults: latent class analysis

scientific article

Evaluation of Pneumococcal Load in Blood by Polymerase Chain Reaction for the Diagnosis of Pneumococcal Pneumonia in Young Children in the PERCH Study

scholarly article by Maria Deloria Knoll et al published 15 June 2017 in Clinical Infectious Diseases

Evaluation of risk factors for severe pneumonia in children: the Pneumonia Etiology Research for Child Health study

scientific article published in April 2012

Evaluation of surveillance for surgical site infections in Thika Hospital, Kenya

scientific article published on 18 January 2013

Excess child mortality after discharge from hospital in Kilifi, Kenya: a retrospective cohort analysis

scientific article published on 13 July 2011

Genetic variants associated with non-typhoidal Salmonella bacteraemia in African children.

scientific article published on February 2015

Genetic variation in is associated with bacteremia secondary to diverse pathogens in African children

article published in the Proceedings of the National Academy of Sciences of the United States of America

Geographic access to care is not a determinant of child mortality in a rural Kenyan setting with high health facility density

scientific article

Global and regional burden of hospital admissions for severe acute lower respiratory infections in young children in 2010: a systematic analysis

scientific article published on 29 January 2013

Global burden of acute lower respiratory infection associated with human metapneumovirus in children under 5 years in 2018: a systematic review and modelling study

scientific article published on 26 November 2020

Global funding trends for malaria research in sub-Saharan Africa: a systematic analysis

scientific article

Global, regional, and national disease burden estimates of acute lower respiratory infections due to respiratory syncytial virus in young children in 2015: a systematic review and modelling study

scientific article

Glucose-6-phosphate dehydrogenase deficiency and susceptibility to childhood diseases in Kilifi, Kenya

scientific article published on 01 December 2020

Homozygosity and risk of childhood death due to invasive bacterial disease

scientific article

Human genetic and metabolite variation reveals that methylthioadenosine is a prognostic biomarker and an inflammatory regulator in sepsis

scientific article published on 08 March 2017

Identification and selection of cases and controls in the Pneumonia Etiology Research for Child Health project

scientific article published in April 2012

Immunization coverage and risk factors for failure to immunize within the Expanded Programme on Immunization in Kenya after introduction of new Haemophilus influenzae type b and hepatitis b virus antigens

scientific article

Immunogenicity, impact on carriage and reactogenicity of 10-valent pneumococcal non-typeable Haemophilus influenzae protein D conjugate vaccine in Kenyan children aged 1-4 years: a randomized controlled trial

scientific article published on 21 January 2014

Impact of 10-valent pneumococcal conjugate vaccine on invasive pneumococcal disease and nasopharyngeal carriage in Kenya

scholarly article published 18 July 2018

Impact of viral upper respiratory tract infection on the concentration of nasopharyngeal pneumococcal carriage among Kenyan children

scientific article published in Scientific Reports

Incidence and clinical characteristics of group A rotavirus infections among children admitted to hospital in Kilifi, Kenya

scientific article

Incidence and outcome of convulsive status epilepticus in Kenyan children: a cohort study

scientific article

Incidence and severity of respiratory syncytial virus pneumonia in rural Kenyan children identified through hospital surveillance

scientific article

Incidence of clinically significant bacteraemia in children who present to hospital in Kenya: community-based observational study

scientific article

Incidence of convulsive epilepsy in a rural area in Kenya

scientific article

Influenza surveillance among children with pneumonia admitted to a district hospital in coastal Kenya, 2007-2010

scientific article published in December 2012

Initial findings from a novel population-based child mortality surveillance approach: a descriptive study

scientific article published on 01 July 2020

Introduction to the Epidemiologic Considerations, Analytic Methods, and Foundational Results From the Pneumonia Etiology Research for Child Health Study

scientific article

Invasive Gram-negative bacilli are frequently resistant to standard antibiotics for children admitted to hospital in Kilifi, Kenya

scientific article published on 19 May 2005

Invasive Group A Streptococcus Infection among Children, Rural Kenya

scientific article published on February 2016

Invasive Salmonellosis in Kilifi, Kenya

scientific article

Investment in pneumonia and pneumococcal research.

scientific article published on 19 October 2014

Is Higher Viral Load in the Upper Respiratory Tract Associated With Severe Pneumonia? Findings From the PERCH Study

scholarly article by Daniel Feikin et al published 15 June 2017 in Clinical Infectious Diseases

Limited Utility of Polymerase Chain Reaction in Induced Sputum Specimens for Determining the Causes of Childhood Pneumonia in Resource-Poor Settings: Findings From the Pneumonia Etiology Research for Child Health (PERCH) Study

article

Making standards for quantitative real-time pneumococcal PCR.

scientific article published on 04 December 2014

Mapping pneumonia research: A systematic analysis of UK investments and published outputs 1997-2013.

scientific article

Medical causes of admissions to hospital among adults in Africa: a systematic review

scientific article

Microscopic Analysis and Quality Assessment of Induced Sputum From Children With Pneumonia in the PERCH Study

scholarly article by David Murdoch et al published 15 June 2017 in Clinical Infectious Diseases

Molecular epidemiology of Klebsiella pneumoniae invasive infections over a decade at Kilifi County Hospital in Kenya

scientific article published on 22 July 2017

Mortality Surveillance Methods to Identify and Characterize Deaths in Child Health and Mortality Prevention Surveillance Network Sites

article by Navit T Salzberg et al published 1 October 2019 in Clinical Infectious Diseases

Mortality after Inpatient Treatment for Severe Pneumonia in Children: a Cohort Study

scientific article

Nasopharyngeal Pneumococcal Carriage in Nigeria: a two-site, population-based survey.

scientific article published on 22 February 2018

Observational study: 27 years of severe malaria surveillance in Kilifi, Kenya

scientific article published on 08 July 2019

Outpacing the pneumococcus: Antibody dynamics in the first few days following pneumococcal capsular antigen stimulation

scientific article published in Scientific Reports

Performance of the MGIT TBc identification test and meta-analysis of MPT64 assays for identification of the Mycobacterium tuberculosis complex in liquid culture

scientific article published on 12 October 2011

Pertussis-Associated Pneumonia in Infants and Children From Low- and Middle-Income Countries Participating in the PERCH Study

scientific article published on December 2016

Phenotypic, genomic, and transcriptional characterization of Streptococcus pneumoniae interacting with human pharyngeal cells

scientific article

Plasmodium falciparum infection patterns since birth and risk of severe malaria: a nested case-control study in children on the coast of Kenya

scientific article

Pneumococcal conjugate vaccine given shortly after birth stimulates effective antibody concentrations and primes immunological memory for sustained infant protection

scientific article

Pneumococcal conjugate vaccine induced IgG and nasopharyngeal carriage of pneumococci: Hyporesponsiveness and immune correlates of protection for carriage

scientific article

Pneumococcal vaccination in developing countries.

scientific article

Pneumonia etiology research for child health. Introduction

scientific article published in April 2012

Pneumonia research to reduce childhood mortality in the developing world

scientific article published on April 2008

Pneumonia research to reduce childhood mortality in the developing world

scientific article published in August 2010

Polymorphism in a lincRNA Associates with a Doubled Risk of Pneumococcal Bacteremia in Kenyan Children

scientific article published on 26 May 2016

Population effect of 10-valent pneumococcal conjugate vaccine on nasopharyngeal carriage of Streptococcus pneumoniae and non-typeable Haemophilus influenzae in Kilifi, Kenya: findings from cross-sectional carriage studies

scientific article published on 28 May 2014

Population genetic structure of Streptococcus pneumoniae in Kilifi, Kenya, prior to the introduction of pneumococcal conjugate vaccine

scientific article

Population-Based Estimate of Melioidosis, Kenya

article

Prediction of serotypes causing invasive pneumococcal disease in unvaccinated and vaccinated populations

scientific article

Procedures for collection of induced sputum specimens from children

scientific article published in April 2012

Profile: The Kilifi Health and Demographic Surveillance System (KHDSS)

scientific article (publication date: June 2012)

Progressive increase in antimicrobial resistance among invasive isolates of Haemophilus influenzae obtained from children admitted to a hospital in Kilifi, Kenya, from 1994 to 2002 ⬇️

scientific article

Prospective Observational Study of Incidence and Preventable Burden of Childhood Tuberculosis, Kenya

scientific article published in March 2018

Quantifying maternally derived respiratory syncytial virus specific neutralising antibodies in a birth cohort from coastal Kenya

scientific article

Rates of acquisition and clearance of pneumococcal serotypes in the nasopharynges of children in Kilifi District, Kenya

scientific article

Rates of acquisition of pneumococcal colonization and transmission probabilities, by serotype, among newborn infants in Kilifi District, Kenya

scientific article

Relation between falciparum malaria and bacteraemia in Kenyan children: a population-based, case-control study and a longitudinal study

scientific article

Risk and causes of paediatric hospital-acquired bacteraemia in Kilifi District Hospital, Kenya: a prospective cohort study

scientific article published on 29 November 2011

Risk factors for community-acquired pneumonia among adults in Kenya: a case-control study

scientific article

Risk of Injection-Site Abscess among Infants Receiving a Preservative-Free, Two-Dose Vial Formulation of Pneumococcal Conjugate Vaccine in Kenya

scientific article published on 28 October 2015

Risk of nontyphoidal Salmonella bacteraemia in African children is modified by STAT4. ⬇️

scientific article

Risk of pneumococcal bacteremia in Kenyan children with glucose-6-phosphate dehydrogenase deficiency

scientific article published on 15 June 2020

Safety of Induced Sputum Collection in Children Hospitalized With Severe or Very Severe Pneumonia

scientific article published in 2017

Sensitivity of hospital-based surveillance for severe disease: a geographic information system analysis of access to care in Kilifi district, Kenya

scientific article

Seroprevalence of anti-SARS-CoV-2 IgG antibodies in Kenyan blood donors

scientific article

Severe lower respiratory tract infection in early infancy and pneumonia hospitalizations among children, Kenya

scientific article published on February 2013

Should Controls With Respiratory Symptoms Be Excluded From Case-Control Studies of Pneumonia Etiology? Reflections From the PERCH Study

article

Spatial and socio-demographic predictors of time-to-immunization in a rural area in Kenya: Is equity attainable?

scientific article

Specimen collection for the diagnosis of pediatric pneumonia

scientific article published on April 2012

Standard method for detecting upper respiratory carriage of Streptococcus pneumoniae: updated recommendations from the World Health Organization Pneumococcal Carriage Working Group

scientific article published on December 2013

Standardization of Clinical Assessment and Sample Collection Across All PERCH Study Sites

scientific article published in 2017

Standardization of Laboratory Methods for the PERCH Study

scientific article

Supporting surveillance capacity for antimicrobial resistance: Laboratory capacity strengthening for drug resistant infections in low and middle income countries.

scientific article published on 26 September 2017

Sustained reduction in vaccine-type invasive pneumococcal disease despite waning effects of a catch-up campaign in Kilifi, Kenya: A mathematical model based on pre-vaccination data

scientific article published on 17 July 2017

Sustaining pneumococcal vaccination after transitioning from Gavi support: a modelling and cost-effectiveness study in Kenya

scientific article published on 01 May 2019

The Aetiology of pneumonia from analysis of Lung aspirate and Pleural fluid samples: Findings from the PERCH study

scientific article published on 25 July 2020

The Diagnostic Utility of Induced Sputum Microscopy and Culture in Childhood Pneumonia

article

The Effect of Antibiotic Exposure and Specimen Volume on the Detection of Bacterial Pathogens in Children With Pneumonia

scholarly article by Amanda J Driscoll et al published 15 June 2017 in Clinical Infectious Diseases

The Enduring Challenge of Determining Pneumonia Etiology in Children: Considerations for Future Research Priorities

scientific article

The Malaria-High Blood Pressure Hypothesis

scientific article

The Pneumonia Etiology Research for Child Health Project: a 21st century childhood pneumonia etiology study

scientific article (publication date: April 2012)

The Potential for Reducing the Number of Pneumococcal Conjugate Vaccine Doses While Sustaining Herd Immunity in High-Income Countries

scientific article published on 9 June 2015

The allocation of USdollar;105 billion in global funding from G20 countries for infectious disease research between 2000 and 2017: a content analysis of investments

scientific article published on 01 October 2020

The clinical epidemiology of sickle cell anemia In Africa.

scientific article published on 23 November 2017

The definition of pneumonia, the assessment of severity, and clinical standardization in the Pneumonia Etiology Research for Child Health study

scientific article

The descriptive epidemiology of Streptococcus pneumoniae and Haemophilus influenzae nasopharyngeal carriage in children and adults in Kilifi district, Kenya

scientific article published on January 2008

The epidemiology of sickle cell disease in children recruited in infancy in Kilifi, Kenya: a prospective cohort study

scientific article published on 23 August 2019

The ferroportin Q248H mutation protects from anemia, but not malaria or bacteremia

scientific article published on 04 September 2019

The global epidemiology of childhood pneumonia 20 years on.

scientific article published on June 2008

The impact of 10-valent Pneumococcal Conjugate Vaccine on the incidence of radiologically-confirmed pneumonia and clinically-defined pneumonia in Kenyan children

scholarly article published 18 July 2018

The indirect health effects of malaria estimated from health advantages of the sickle cell trait

scientific article published on 20 February 2019

The predictive performance of a pneumonia severity score in HIV-negative children presenting to hospital in seven low and middle-income countries

article

The prevalence and risk factors for pneumococcal colonization of the nasopharynx among children in Kilifi District, Kenya

scientific article (publication date: 2012)

The preventable burden of pneumococcal disease in the developing world

scientific article published on 18 September 2006

The role of postmortem studies in pneumonia etiology research

scientific article published on April 2012

Transcriptional adaptation of pneumococci and human pharyngeal cells in the presence of a virus infection

scientific article

Treatment failure among Kenyan children with severe pneumonia--a cohort study.

scientific article published on September 2012

Trends in bednet ownership and usage, and the effect of bednets on malaria hospitalization in the Kilifi Health and Demographic Surveillance System (KHDSS): 2008-2015.

scientific article published on 15 November 2017

Use of clinical syndromes to target antibiotic prescribing in seriously ill children in malaria endemic area: observational study

scientific article

Use of vaccines as probes to define disease burden

scientific article

Validation of immunoglobulin G enzyme-linked immunosorbent assay for antibodies to pneumococcal surface adhesin A in the diagnosis of pneumococcal pneumonia among adults in Kenya.

scientific article published on 17 June 2002

Validation of nasopharyngeal sampling and culture techniques for detection of Streptococcus pneumoniae in children in Kenya

scientific article

Variation in the effectiveness of insecticide treated nets against malaria and outdoor biting by vectors in Kilifi, Kenya

scholarly article by Alice Kamau et al published 15 January 2018 in Wellcome Open Research

Variation in the effectiveness of insecticide treated nets against malaria and outdoor biting by vectors in Kilifi, Kenya

scientific article published on 30 March 2017

Variation in the effectiveness of insecticide treated nets against malaria and outdoor biting by vectors in Kilifi, Kenya

scientific article published on 01 January 2017

Viral etiology of severe pneumonia among Kenyan infants and children.

scientific article

What are the implications for childhood pneumonia of successfully introducing Hib and pneumococcal vaccines in developing countries?

scientific article

What is the future for global case management guidelines for common childhood diseases?

scientific article (publication date: 9 December 2008)

Paulina is supported by:

About Paulina

Help