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List of works by Bing Ren

A comparative atlas of single-cell chromatin accessibility in the human brain

scientific article published on 12 October 2023

A compendium of promoter-centered long-range chromatin interactions in the human genome

scientific article published on 09 September 2019

A transcriptomic and epigenomic cell atlas of the mouse primary motor cortex

scientific article

An atlas of gene regulatory elements in adult mouse cerebrum

scientific article published on 06 October 2021

An ultra high-throughput method for single-cell joint analysis of open chromatin and transcriptome

scientific article published on 06 November 2019

Author Correction: An atlas of dynamic chromatin landscapes in mouse fetal development

scientific article published on 10 October 2020

Author Correction: An atlas of dynamic chromatin landscapes in mouse fetal development

scientific article published on 04 January 2021

Author Correction: Single-nucleus analysis of accessible chromatin in developing mouse forebrain reveals cell-type-specific transcriptional regulation

scientific article published in March 2018

CTCF mediates dosage- and sequence-context-dependent transcriptional insulation by forming local chromatin domains

scientific article published on 17 May 2021

Cell-autonomous inflammation of BRCA1-deficient ovarian cancers drives both tumor-intrinsic immunoreactivity and immune resistance via STING

scientific article published on 01 July 2021

Common DNA sequence variation influences 3-dimensional conformation of the human genome

scientific article published on 28 November 2019

Comparative cellular analysis of motor cortex in human, marmoset and mouse

scientific article published on 06 October 2021

Comprehensive analysis of single cell ATAC-seq data with SnapATAC

scientific article published on 26 February 2021

DNA methylation atlas of the mouse brain at single-cell resolution

scientific article

DNA replication acts as an error correction mechanism to maintain centromere identity by restricting CENP-A to centromeres

scientific article published on 03 June 2019

Direct DNA crosslinking with CAP-C uncovers transcription-dependent chromatin organization at high resolution

scientific article published on 24 August 2020

Droplet-based single-cell joint profiling of histone modifications and transcriptomes

scientific article published in 2023

Dynamic reorganization of the genome shapes the recombination landscape in meiotic prophase

scientific article published on 18 February 2019

Expanded encyclopaedias of DNA elements in the human and mouse genomes

scientific article published on 29 July 2020

FIREcaller: Detecting frequently interacting regions from Hi-C data

scientific article published on 29 December 2020

Genome-wide association and multi-omic analyses reveal ACTN2 as a gene linked to heart failure

scientific article published on 28 February 2020

Human-gained heart enhancers are associated with species-specific cardiac attributes

scientific article published in 2022

Identification of H3K4me1-associated proteins at mammalian enhancers

scientific article published on 18 December 2017

Joint profiling of DNA methylation and chromatin architecture in single cells

scientific article published on 05 August 2019

Multi-platform discovery of haplotype-resolved structural variation in human genomes

scientific article published on 16 April 2019

Pancreatic islet chromatin accessibility and conformation reveals distal enhancer networks of type 2 diabetes risk

scientific article published on 07 May 2019

Parallel characterization of cis-regulatory elements for multiple genes using CRISPRpath

scientific article published on 15 September 2021

Perspectives on ENCODE

scientific article published on 29 July 2020

Promoter-proximal CTCF binding promotes distal enhancer-dependent gene activation

scientific article published on 04 January 2021

Ranking of non-coding pathogenic variants and putative essential regions of the human genome

scientific article published on 20 November 2019

Sequence logic at enhancers governs a dual mechanism of endodermal organ fate induction by FOXA pioneer factors

scientific article published on 17 November 2021

Single-cell DNA methylation and 3D genome architecture in the human brain

scientific article published on 12 October 2023

Single-nucleus analysis of accessible chromatin in developing mouse forebrain reveals cell-type-specific transcriptional regulation.

scientific article published on 12 February 2018

SnapHiC: a computational pipeline to identify chromatin loops from single-cell Hi-C data

scientific article published on 26 August 2021

Spatiotemporal DNA methylome dynamics of the developing mouse fetus

scientific article published on 29 July 2020

The changing mouse embryo transcriptome at whole tissue and single-cell resolution

scientific article published on 29 July 2020

The human noncoding genome defined by genetic diversity

scientific article published on 26 February 2018

Transcriptionally active HERV-H retrotransposons demarcate topologically associating domains in human pluripotent stem cells

scientific article published on 19 August 2019

ZNF143 mediates CTCF-bound promoter-enhancer loops required for murine hematopoietic stem and progenitor cell function

scientific article published on 04 January 2021

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