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List of works by Wim Hordijk

A formal model of autocatalytic sets emerging in an RNA replicator system

article

Algorithms for detecting and analysing autocatalytic sets

scientific article published on 28 April 2015

Amplitude Spectra of Fitness Landscapes

article published in 1998

Autocatalytic Networks at the Basis of Life's Origin and Organization

scientific article published on 08 December 2018

Autocatalytic Sets Arising in a Combinatorial Model of Chemical Evolution

scientific article published on 26 October 2022

Autocatalytic Sets and RNA Secondary Structure.

scientific article published on 4 April 2017

Autocatalytic chemical networks at the origin of metabolism

scientific article published on 11 March 2020

Autocatalytic networks in biology: structural theory and algorithms

scientific article published on 01 February 2019

Autocatalytic sets and biological specificity.

scientific article published in January 2014

Autocatalytic sets and boundaries.

scientific article published on 12 February 2015

Autocatalytic sets extended: Dynamics, inhibition, and a generalization

article

Autocatalytic sets in E. coli metabolism

scientific article

Autocatalytic sets in a partitioned biochemical network.

scientific article

Average Fitness Differences on NK Landscapes

Biodiversity is autocatalytic

scientific article published in 2017

Chasing the tail: The emergence of autocatalytic networks.

scientific article published on 24 December 2016

Comment on "Tibor Gánti and Robert Rosen" by Athel Cornish-Bowden.

scientific article published on 27 November 2015

Conditions for evolvability of autocatalytic sets: a formal example and analysis.

scientific article published in April 2014

Correction to: On the emergence of ecological and economic niches

scientific article published in 2020

Detecting autocatalytic, self-sustaining sets in chemical reaction systems.

scientific article published in April 2004

Developmental structuring of phenotypic variation: A case study with a cellular automata model of ontogeny

scientific article published on 11 September 2019

Dispersal routes reconstruction and the minimum cost arborescence problem

scientific article

Dynamics of a birth-death process based on combinatorial innovation

scientific article published on 04 February 2020

Fast Fourier Transform for Fitness Landscapes

Graph Laplacians, nodal domains, and hyperplane arrangements

article

Improving the efficiency of SPR moves in phylogenetic tree search methods based on maximum likelihood

scientific article

Minimal autocatalytic networks.

scientific article published on 3 May 2013

Molecular Diversity Required for the Formation of Autocatalytic Sets

scientific article published on 01 March 2019

New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

scientific article (publication date: May 2010)

Niche emergence as an autocatalytic process in the evolution of ecosystems

scientific article published on 01 June 2018

On the emergence of ecological and economic niches

scientific article published in 2020

Phase transition and landscape statistics of the number partitioning problem

scientific article

Population Dynamics of Autocatalytic Sets in a Compartmentalized Spatial World

scientific article

Predicting present and future intra-specific genetic structure through niche hindcasting across 24 millennia

scientific article

Predicting template-based catalysis rates in a simple catalytic reaction model.

scientific article

Required levels of catalysis for emergence of autocatalytic sets in models of chemical reaction systems ⬇️

scientific article published on 12 May 2011

Shapes of tree representations of spin-glass landscapes

Supertree algorithms for ancestral divergence dates and nested taxa.

scientific article published on 8 April 2004

The Influence of Modularity, Seeding, and Product Inhibition on Peptide Autocatalytic Network Dynamics

scientific article published on 19 June 2018

The MIGCLIM R package - seamless integration of dispersal constraints into projections of species distribution models

article

The footprint sorting problem

scientific article published in March 2004

The structure of autocatalytic sets: evolvability, enablement, and emergence.

scientific article published on 28 September 2012

ecospat: an R package to support spatial analyses and modeling of species niches and distributions

article

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