List of works by Bart P H J Thomma

A distinct and genetically diverse lineage of the hybrid fungal pathogen Verticillium longisporum population causes stem striping in British oilseed rape

scientific article

A genome-wide functional investigation into the roles of receptor-like proteins in Arabidopsis

scientific article

A lysin motif effector subverts chitin-triggered immunity to facilitate arbuscular mycorrhizal symbiosis

scientific article published on 23 November 2019

A robust identification and detection assay to discriminate the cucumber pathogens Fusarium oxysporum f. sp. cucumerinum and f. sp. radicis-cucumerinum

scientific article published on 01 September 2007

A secreted LysM effector protects fungal hyphae through chitin-dependent homodimer polymerization

scientific article published on 23 June 2020

A unique chromatin profile defines adaptive genomic regions in a fungal plant pathogen

scientific article published on 18 December 2020

Affinity of Avr2 for tomato cysteine protease Rcr3 correlates with the Avr2-triggered Cf-2-mediated hypersensitive response

scientific article published in January 2011

Affinity-tags are removed from Cladosporium fulvum effector proteins expressed in the tomato leaf apoplast

article

Alternaria spp.: from general saprophyte to specific parasite

scientific article published on July 2003

Analysis of two in planta expressed LysM effector homologs from the fungus Mycosphaerella graminicola reveals novel functional properties and varying contributions to virulence on wheat.

scientific article published on 5 April 2011

Arabidopsis CLAVATA1 and CLAVATA2 receptors contribute to Ralstonia solanacearum pathogenicity through a miR169-dependent pathway

scientific article

Bidirectional cross-kingdom RNAi and fungal uptake of external RNAs confer plant protection.

scientific article published on 19 September 2016

Broad taxonomic characterization of Verticillium wilt resistance genes reveals an ancient origin of the tomato Ve1 immune receptor

scientific article published on 4 March 2016

Challenges in plant cellular pathway reconstruction based on gene expression profiling.

scientific article published on 21 December 2007

Chaperones of the endoplasmic reticulum are required for Ve1-mediated resistance to Verticillium.

scientific article

Characterisation of an Arabidopsis-Leptosphaeria maculans pathosystem: resistance partially requires camalexin biosynthesis and is independent of salicylic acid, ethylene and jasmonic acid signalling

scientific article published in January 2004

Chitin-Binding Protein of Verticillium nonalfalfae Disguises Fungus from Plant Chitinases and Suppresses Chitin-Triggered Host Immunity

scientific article published on 14 August 2019

Chromatin Biology Impacts Adaptive Evolution of Filamentous Plant Pathogens

scientific article

Cladosporium fulvum (syn. Passalora fulva), a highly specialized plant pathogen as a model for functional studies on plant pathogenic Mycosphaerellaceae.

scientific article published in July 2005

Colletotrichum higginsianum extracellular LysM proteins play dual roles in appressorial function and suppression of chitin-triggered plant immunity.

scientific article published on 13 May 2016

Comparative genomics reveals the in planta-secreted Verticillium dahliae Av2 effector protein recognized in tomato plants that carry the V2 resistance locus

scientific article published on 19 October 2020

Comparative genomics yields insights into niche adaptation of plant vascular wilt pathogens

scientific article

Conserved fungal LysM effector Ecp6 prevents chitin-triggered immunity in plants.

scientific article

Control of the pattern-recognition receptor EFR by an ER protein complex in plant immunity.

scientific article published on 17 September 2009

Convergent evolution of filamentous microbes towards evasion of glycan-triggered immunity.

scientific article

Correction: Mutational Analysis of the Ve1 Immune Receptor That Mediates Verticillium Resistance in Tomato

scientific article published on 23 July 2019

Defensins from insects and plants interact with fungal glucosylceramides

scientific article published on 6 November 2003

Design and development of a DNA array for rapid detection and identification of multiple tomato vascular wilt pathogens

scientific article

Detecting single nucleotide polymorphisms using DNA arrays for plant pathogen diagnosis

scientific article published on 01 February 2006

Development of a method for detection of latent European fruit tree canker (Neonectria ditissima) infections in apple and pear nurseries

article by Marcel Wenneker et al published 1 December 2016 in European Journal of Plant Pathology

Differential tomato transcriptomic responses induced by pepino mosaic virus isolates with differential aggressiveness.

scientific article published on 22 March 2011

Disease induction by human microbial pathogens in plant-model systems: potential, problems and prospects

scientific article published on 20 December 2006

Draft Genome Sequence of a Strain of Cosmopolitan Fungus Trichoderma atroviride

scientific article

Dynamic virulence-related regions of the plant pathogenic fungus Verticillium dahliae display enhanced sequence conservation

scientific article published on 29 July 2019

EIL2 transcription factor and glutathione synthetase are required for defense of tobacco against tobacco blue mold

scientific article published in April 2006

Effector-mediated suppression of chitin-triggered immunity by magnaporthe oryzae is necessary for rice blast disease

scientific article

Emerging viral diseases of tomato crops.

scientific article published on May 2010

Endoplasmic reticulum-quality control chaperones facilitate the biogenesis of Cf receptor-like proteins involved in pathogen resistance of tomato

scientific article published on 30 May 2012

Esa1, an Arabidopsis mutant with enhanced susceptibility to a range of necrotrophic fungal pathogens, shows a distorted induction of defense responses by reactive oxygen generating compounds

scientific article published in January 2002

Evidence for functional diversification within a fungal NEP1-like protein family.

scientific article

Evolution within the fungal genus Verticillium is characterized by chromosomal rearrangement and gene loss.

scientific article published on 28 December 2017

Evolutionary relationships between Fusarium oxysporum f. sp. lycopersici and F. oxysporum f. sp. radicis-lycopersici isolates inferred from mating type, elongation factor-1alpha and exopolygalacturonase sequences.

scientific article published on 11 August 2009

Extensive chromosomal reshuffling drives evolution of virulence in an asexual pathogen

scientific article published on 16 May 2013

Filamentous pathogen effector functions: of pathogens, hosts and microbiomes

scientific article

Functional analyses of the CLAVATA2-like proteins and their domains that contribute to CLAVATA2 specificity

scientific article

Functional analysis of the tomato immune receptor Ve1 through domain swaps with its non-functional homolog Ve2

scientific article

Fungal LysM effectors: extinguishers of host immunity?

scientific article

Fungal effector Ecp6 outcompetes host immune receptor for chitin binding through intrachain LysM dimerization

scientific article

Gene cluster conservation identifies melanin and perylenequinone biosynthesis pathways in multiple plant pathogenic fungi

scientific article published on 19 December 2018

Gene cluster conservation provides insight into cercosporin biosynthesis and extends production to the genus Colletotrichum.

scientific article published on 29 May 2018

Genetic dissection of Verticillium wilt resistance mediated by tomato Ve1.

scientific article published on 25 March 2009

Genome Sequence of a Lethal Strain of Xylem-Invading Verticillium nonalfalfae

scientific article

Genomics spurs rapid advances in our understanding of the biology of vascular wilt pathogens in the genus Verticillium

scientific article published on 03 June 2015

Get your high-quality low-cost genome sequence.

scientific article

Host-induced gene silencing compromises Verticillium wilt in tomato and Arabidopsis.

scientific article published on 17 October 2016

How filamentous pathogens co-opt plants: the ins and outs of fungal effectors.

scientific article published on 30 March 2011

Identification and characterization of Cercospora beticola necrosis-inducing effector CbNip1

scientific article published on 23 December 2020

Identification of sugarcane genes induced in disease-resistant somaclones upon inoculation with Ustilago scitaminea or Bipolaris sacchari.

scientific article published on 29 September 2005

Identification of tomato phosphatidylinositol-specific phospholipase-C (PI-PLC) family members and the role of PLC4 and PLC6 in HR and disease resistance.

scientific article

In silico prediction and characterisation of secondary metabolite clusters in the plant pathogenic fungus Verticillium dahliae

article

Interfamily transfer of a plant pattern-recognition receptor confers broad-spectrum bacterial resistance.

scientific article

Interfamily transfer of tomato Ve1 mediates Verticillium resistance in Arabidopsis.

scientific article

Interspecific hybridization impacts host range and pathogenicity of filamentous microbes

scientific article

Long Read Annotation (LoReAn): automated eukaryotic genome annotation based on long-read cDNA sequencing

scientific article published on 06 November 2018

LysM effectors: secreted proteins supporting fungal life

scientific article

Meeting Report: Fungal Genomics Meets Social Media: Highlights of the 28th Fungal Genetics Conference at Asilomar

scientific article

Metabolomics of tomato xylem sap during bacterial wilt reveals Ralstonia solanacearum produces abundant putrescine, a metabolite that accelerates wilt disease.

scientific article published on 7 December 2017

Microbiome manipulation by a soil-borne fungal plant pathogen using effector proteins

scientific article published on 02 November 2020

Mind the gap; seven reasons to close fragmented genome assemblies.

scientific article published on 02 September 2015

Mode of action of plant defensins suggests therapeutic potential

scientific article

Molecular mechanisms of pathogenicity: how do pathogenic microorganisms develop cross-kingdom host jumps?

scientific article published on 26 February 2007

Mutational analysis of the Ve1 immune receptor that mediates Verticillium resistance in tomato.

scientific article

Nitrogen controls in planta expression of Cladosporium fulvum Avr9 but no other effector genes

scientific article published on 01 March 2006

NmDef02, a novel antimicrobial gene isolated from Nicotiana megalosiphon confers high-level pathogen resistance under greenhouse and field conditions

scientific article published in August 2010

Of PAMPs and effectors: the blurred PTI-ETI dichotomy

scientific article

Optimized agroinfiltration and virus-induced gene silencing to study Ve1-mediated Verticillium resistance in tobacco

scientific article published in February 2013

PIRIN2 stabilizes cysteine protease XCP2 and increases susceptibility to the vascular pathogen Ralstonia solanacearum in Arabidopsis

scientific article

Pepino mosaic virus: a successful pathogen that rapidly evolved from emerging to endemic in tomato crops.

scientific article published on March 2010

Physiology and molecular aspects of Verticillium wilt diseases caused by V. dahliae and V. albo-atrum

scientific article published in March 2006

Plant defensins.

scientific article

Plant pathogen effector proteins as manipulators of host microbiomes?

scientific article published in February 2018

Plant-mediated interactions between pathogenic microorganisms and herbivorous arthropods

scientific article

Quantification of disease progression of several microbial pathogens on Arabidopsis thaliana using real-time fluorescence PCR.

scientific article

Quantitative assessment of phytopathogenic fungi in various substrates using a DNA macroarray.

scientific article

RNA silencing is required for Arabidopsis defence against Verticillium wilt disease

scientific article (publication date: 2009)

RNA-sequencing of Cercospora beticola DMI-sensitive and -resistant isolates after treatment with tetraconazole identifies common and contrasting pathway induction.

scientific article published on 22 April 2016

Ratio of mutated versus wild-type coat protein sequences in Pepino mosaic virus determines the nature and severity of yellowing symptoms on tomato plants.

scientific article published on 15 July 2013

Recent developments in pathogen detection arrays: implications for fungal plant pathogens and use in practice

scientific article published on December 2005

Recent developments in the molecular discrimination of formae speciales of Fusarium oxysporum

scientific article published on August 2008

Receptor-like kinase SOBIR1/EVR interacts with receptor-like proteins in plant immunity against fungal infection

scientific article published on 28 May 2013

Redefining plant systems biology: from cell to ecosystem.

scientific article published on 5 January 2011

Repetitive Elements Contribute to the Diversity and Evolution of Centromeres in the Fungal Genus Verticillium

scientific article published on 08 September 2020

Rhamnose synthase activity is required for pathogenicity of the vascular wilt fungus Verticillium dahliae

scientific article published on 21 March 2016

Sclerotinia sclerotiorum (Lib.) de Bary: biology and molecular traits of a cosmopolitan pathogen

scientific article published on January 2006

Sex or no sex: evolutionary adaptation occurs regardless.

scientific article

Single-Molecule Real-Time Sequencing Combined with Optical Mapping Yields Completely Finished Fungal Genome

scientific article published on 18 August 2015

Stress and sexual reproduction affect the dynamics of the wheat pathogen effector AvrStb6 and strobilurin resistance.

scientific article published on 12 February 2018

Structure-function aspects of extracellular leucine-rich repeat-containing cell surface receptors in plants

scientific article published on 18 September 2013

Suppression of Plant Immunity by Fungal Chitinase-like Effectors.

scientific article published on 13 September 2018

Targeting microbial pathogens

scientific article

The Age of Effectors: Genome-Based Discovery and Applications.

scientific article

The Arabidopsis mutant iop1 exhibits induced over-expression of the plant defensin gene PDF1.2 and enhanced pathogen resistance

scientific article published on November 2003

The Arabidopsis thaliana DNA-binding protein AHL19 mediates verticillium wilt resistance

scientific article published on 01 December 2011

The BRI1-Associated Kinase 1, BAK1, Has a Brassinolide-Independent Role in Plant Cell-Death Control

article

The Brassicaceae-specific EWR1 gene provides resistance to vascular wilt pathogens

scientific article published on 05 February 2014

The Chitin-BindingCladosporium fulvumEffector Protein Avr4 Is a Virulence Factor

scientific article published on 01 September 2007

The Cladosporium fulvum virulence protein Avr2 inhibits host proteases required for basal defense.

scientific article published on 25 July 2008

The EDS1–PAD4–ADR1 node mediates Arabidopsis pattern-triggered immunity

scientific article published in 2021

The Emerging British Verticillium longisporum Population Consists of Aggressive Brassica Pathogens.

scientific article published on 27 June 2017

The Genome of the Fungal Pathogen Verticillium dahliae Reveals Extensive Bacterial to Fungal Gene Transfer

article

The Genome of the Saprophytic Fungus Verticillium tricorpus Reveals a Complex Effector Repertoire Resembling That of Its Pathogenic Relatives.

scientific article published on March 2015

The battle for chitin recognition in plant-microbe interactions.

scientific article

The heterothallic sugarbeet pathogen Cercospora beticola contains exon fragments of both MAT genes that are homogenized by concerted evolution

scientific article

The jasmonate-insensitive mutant jin1 shows increased resistance to biotrophic as well as necrotrophic pathogens

scientific article

The novel Cladosporium fulvum lysin motif effector Ecp6 is a virulence factor with orthologues in other fungal species.

scientific article published on 28 April 2008

The role of chitin detection in plant--pathogen interactions

scientific article published on 05 August 2011

The transcriptome of Verticillium dahliae-infected Nicotiana benthamiana determined by deep RNA sequencing

scientific article published on 17 August 2012

The xylem as battleground for plant hosts and vascular wilt pathogens

scientific article published on 23 April 2013

Therapeutic potential of antifungal plant and insect defensins

scientific article published on 04 September 2007

Three LysM effectors of Zymoseptoria tritici collectively disarm chitin-triggered plant immunity

scientific article published on 01 April 2021

Three putative DNA methyltransferases of Verticillium dahliae differentially contribute to DNA methylation that is dispensable for growth, development and virulence

scientific article published on 03 May 2021

Tobacco blue mould disease caused by Peronospora hyoscyami f. sp. tabacina

scientific article published on January 2010

Tomato immune receptor Ve1 recognizes effector of multiple fungal pathogens uncovered by genome and RNA sequencing

scientific article

Tomato transcriptional responses to a foliar and a vascular fungal pathogen are distinct.

scientific article published in March 2009

Tools of the crook - infection strategies of fungal plant pathogens.

scientific article published on 26 December 2017

Transfer of tomato immune receptor Ve1 confers Ave1-dependent Verticillium resistance in tobacco and cotton.

scientific article

Transposable Elements Direct The Coevolution between Plants and Microbes

scientific article published on 08 August 2017

Transposons passively and actively contribute to evolution of the two-speed genome of a fungal pathogen

scientific article

Understanding plant immunity as a surveillance system to detect invasion.

scientific article published on 06 June 2015

Ve1-mediated resistance against Verticillium does not involve a hypersensitive response in Arabidopsis.

scientific article published on 27 May 2013

Verticillium dahliae LysM effectors differentially contribute to virulence on plant hosts

scientific article

Verticillium dahliae Sge1 differentially regulates expression of candidate effector genes

scientific article published in February 2013

Verticillium longisporum, the invisible threat to oilseed rape and other brassicaceous plant hosts.

scientific article published on 09 December 2015

Virus-induced gene silencing and Agrobacterium tumefaciens-mediated transient expression in Nicotiana tabacum

scientific article published on January 2014

Worse Comes to Worst: Bananas and Panama Disease--When Plant and Pathogen Clones Meet

scientific article

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