List of works - Karim Malki

A systematic review of attention deficit hyperactivity disorder (ADHD) and mathematical ability: current findings and future implications

scientific article (publication date: 2015)

Advances in the genetics of schizophrenia: toward a network and pathway view for drug discovery

scientific article published on February 2016

Antidepressant drug-specific prediction of depression treatment outcomes from genetic and clinical variables.

scientific article

Antidepressant-dependent mRNA changes in mouse associated with hippocampal neurogenesis in a mouse model of depression

scientific article published on November 2012

Antidepressants and the resilience to early-life stress in inbred mouse strains

scientific article published on December 2011

Bigmelon: tools for analysing large DNA methylation datasets

scientific article published on 01 March 2019

Biomarkers predicting treatment outcome in depression: what is clinically significant?

scientific article published on January 2012

Combining clinical variables to optimize prediction of antidepressant treatment outcomes

scientific article published in April 2016

Comparative mRNA analysis of behavioral and genetic mouse models of aggression

scientific article published on 17 February 2016

Convergent animal and human evidence suggests a role of PPM1A gene in response to antidepressants

scientific article

Correlation of miRNA expression with intensity of neuropathic pain in man

scientific article published on 01 January 2019

Cross-species evidence from human and rat brain transcriptome for growth factor signaling pathway dysregulation in major depression

scientific article published on 12 June 2018

Epigenetic differences in monozygotic twins discordant for major depressive disorder

scientific article published on 14 June 2016

Genes and gene networks implicated in aggression related behaviour

scientific article published on 22 August 2014

Genetic relationships between suicide attempts, suicidal ideation and major psychiatric disorders: a genome-wide association and polygenic scoring study

scientific article

Highly polygenic architecture of antidepressant treatment response: Comparative analysis of SSRI and NRI treatment in an animal model of depression

scientific article

Integrative mouse and human mRNA studies using WGCNA nominates novel candidate genes involved in the pathogenesis of major depressive disorder.

scientific article published in December 2013

Loss of Trem2 in microglia leads to widespread disruption of cell co-expression networks in mouse brain

Loss of Trem2 in microglia leads to widespread disruption of cell coexpression networks in mouse brain

scientific article published on 17 May 2018

Pervasive and opposing effects of Unpredictable Chronic Mild Stress (UCMS) on hippocampal gene expression in BALB/cJ and C57BL/6J mouse strains

scientific article published on 3 April 2015

Pharmacoproteomic investigation into antidepressant response in two mouse inbred strains

scientific article

REM sleep's unique associations with corticosterone regulation, apoptotic pathways, and behavior in chronic stress in mice

article published in the Proceedings of the National Academy of Sciences of the United States of America

RNASeq_similarity_matrix: visually identify sample mix-ups in RNASeq data using a 'genomic' sequence similarity matrix

scientific article published on 26 November 2019

The endogenous and reactive depression subtypes revisited: integrative animal and human studies implicate multiple distinct molecular mechanisms underlying major depressive disorder

scientific article

The role of TREM2 in Alzheimer's disease; evidence from transgenic mouse models

scientific article published on 23 September 2019

TractaViewer: a genome-wide tool for preliminary assessment of therapeutic target druggability

scientific article published on 01 November 2019

Transcriptome analysis of genes and gene networks involved in aggressive behavior in mouse and zebrafish

scientific article published on 19 April 2016

List of works by Karim Malki

A systematic review of attention deficit hyperactivity disorder (ADHD) and mathematical ability: current findings and future implications

Advances in the genetics of schizophrenia: toward a network and pathway view for drug discovery

Antidepressant drug-specific prediction of depression treatment outcomes from genetic and clinical variables.

Antidepressant-dependent mRNA changes in mouse associated with hippocampal neurogenesis in a mouse model of depression

Antidepressants and the resilience to early-life stress in inbred mouse strains

Bigmelon: tools for analysing large DNA methylation datasets

Biomarkers predicting treatment outcome in depression: what is clinically significant?

Combining clinical variables to optimize prediction of antidepressant treatment outcomes

Comparative mRNA analysis of behavioral and genetic mouse models of aggression

Convergent animal and human evidence suggests a role of PPM1A gene in response to antidepressants

Correlation of miRNA expression with intensity of neuropathic pain in man

Cross-species evidence from human and rat brain transcriptome for growth factor signaling pathway dysregulation in major depression

Epigenetic differences in monozygotic twins discordant for major depressive disorder

Genes and gene networks implicated in aggression related behaviour

Genetic relationships between suicide attempts, suicidal ideation and major psychiatric disorders: a genome-wide association and polygenic scoring study

Highly polygenic architecture of antidepressant treatment response: Comparative analysis of SSRI and NRI treatment in an animal model of depression

Integrative mouse and human mRNA studies using WGCNA nominates novel candidate genes involved in the pathogenesis of major depressive disorder.

Loss of Trem2 in microglia leads to widespread disruption of cell co-expression networks in mouse brain

Loss of Trem2 in microglia leads to widespread disruption of cell coexpression networks in mouse brain

Pervasive and opposing effects of Unpredictable Chronic Mild Stress (UCMS) on hippocampal gene expression in BALB/cJ and C57BL/6J mouse strains

Pharmacoproteomic investigation into antidepressant response in two mouse inbred strains

REM sleep's unique associations with corticosterone regulation, apoptotic pathways, and behavior in chronic stress in mice

RNASeq_similarity_matrix: visually identify sample mix-ups in RNASeq data using a 'genomic' sequence similarity matrix

The endogenous and reactive depression subtypes revisited: integrative animal and human studies implicate multiple distinct molecular mechanisms underlying major depressive disorder

The role of TREM2 in Alzheimer's disease; evidence from transgenic mouse models

TractaViewer: a genome-wide tool for preliminary assessment of therapeutic target druggability

Transcriptome analysis of genes and gene networks involved in aggressive behavior in mouse and zebrafish