List of works - Ramanathan Sowdhamini

Correction to: Minus-C subfamily has diverged from Classic odorant-binding proteins in honeybees

scientific article published in 2023

DEELIG: A Deep Learning Approach to Predict Protein-Ligand Binding Affinity

scientific article published on 07 July 2021

EcRBPome: a comprehensive database of all known E. coli RNA-binding proteins

scientific article published on 22 May 2019

Genome sequencing of herb Tulsi (Ocimum tenuiflorum) unravels key genes behind its strong medicinal properties

scientific article

Genome-Wide Analysis of Domain-Swap Predicted Products in the Genome of Anti-Stress Medicinal Plant:

article

Genome-Wide Search for Tyrosine Phosphatases in the Human Genome Through Computational Approaches Leads to the Discovery of Few New Domain Architectures

scientific article published on 09 April 2019

Improved detection of remote homologues using cascade PSI-BLAST: influence of neighbouring protein families on sequence coverage

scientific article

InsectOR-Webserver for sensitive identification of insect olfactory receptor genes from non-model genomes

scientific article published on 19 January 2021

Investigating the effect of key mutations on the conformational dynamics of Toll-like receptor dimers through molecular dynamics simulations and protein structure networks

scientific article published on 31 January 2018

LenVarDB: database of length-variant protein domains

scientific article

Minus-C subfamily has diverged from Classic odorant-binding proteins in honeybees

scientific article published in 2023

Molecular Dynamics Simulations and Structural Analysis to Decipher Functional Impact of a Twenty Residue Insert in the Ternary Complex of Mus musculus TdT Isoform

scientific article

Normal Mode Analysis Elicits Conformational Shifts in Proteins at Both Proximal and Distal Regions to the Phosphosite Stemming from Single-Site Phosphorylation

scientific article published in 2024

Probing subtle conformational changes induced by phosphorylation and point mutations in the TIR domains of TLR2 and TLR3.

scientific article published on 31 January 2018

Quaternary variations in the structural assembly of N-acetylglucosamine-6-phosphate deacetylase from Pasteurella multocida

scientific article published on 31 August 2020

Rapid and enhanced remote homology detection by cascading hidden Markov model searches in sequence space

scientific article published on 10 October 2015

Structural updates of alignment of protein domains and consequences on evolutionary models of domain superfamilies

scientific article

List of works by Ramanathan Sowdhamini

Correction to: Minus-C subfamily has diverged from Classic odorant-binding proteins in honeybees

DEELIG: A Deep Learning Approach to Predict Protein-Ligand Binding Affinity

EcRBPome: a comprehensive database of all known E. coli RNA-binding proteins

Genome sequencing of herb Tulsi (Ocimum tenuiflorum) unravels key genes behind its strong medicinal properties

Genome-Wide Analysis of Domain-Swap Predicted Products in the Genome of Anti-Stress Medicinal Plant:

Genome-Wide Search for Tyrosine Phosphatases in the Human Genome Through Computational Approaches Leads to the Discovery of Few New Domain Architectures

Improved detection of remote homologues using cascade PSI-BLAST: influence of neighbouring protein families on sequence coverage

InsectOR-Webserver for sensitive identification of insect olfactory receptor genes from non-model genomes

Investigating the effect of key mutations on the conformational dynamics of Toll-like receptor dimers through molecular dynamics simulations and protein structure networks

LenVarDB: database of length-variant protein domains

Minus-C subfamily has diverged from Classic odorant-binding proteins in honeybees

Molecular Dynamics Simulations and Structural Analysis to Decipher Functional Impact of a Twenty Residue Insert in the Ternary Complex of Mus musculus TdT Isoform

Normal Mode Analysis Elicits Conformational Shifts in Proteins at Both Proximal and Distal Regions to the Phosphosite Stemming from Single-Site Phosphorylation

Probing subtle conformational changes induced by phosphorylation and point mutations in the TIR domains of TLR2 and TLR3.

Quaternary variations in the structural assembly of N-acetylglucosamine-6-phosphate deacetylase from Pasteurella multocida

Rapid and enhanced remote homology detection by cascading hidden Markov model searches in sequence space

Structural updates of alignment of protein domains and consequences on evolutionary models of domain superfamilies