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List of works by Zhenzhen Yi

A case study to estimate the applicability of secondary structures of SSU-rRNA gene in taxonomy and phylogenetic analyses of ciliates

scientific article published on 26 June 2015

A molecular phylogenetic investigation of Pseudoamphisiella and Parabirojimia (Protozoa, Ciliophora, Spirotrichea), two genera with ambiguous systematic positions.

scientific article

A molecular phylogenetic investigation of bakuella, anteholosticha, and caudiholosticha (protista, ciliophora, hypotrichia) based on three-gene sequences

scientific article published on 30 December 2014

A new Peritrich Ciliate from a Hypersaline Habitat in Northern China

scientific article (publication date: 19 September 2016)

Actin evolution in ciliates (Protist, Alveolata) is characterized by high diversity and three duplication events

scientific article published on 22 December 2015

Assessing Whether Alpha-Tubulin Sequences Are Suitable for Phylogenetic Reconstruction of Ciliophora with Insights into Its Evolution in Euplotids ⬇️

scientific article published on July 10, 2012

Assessing the utility of Hsp90 gene for inferring evolutionary relationships within the ciliate subclass Hypotricha (Protista, Ciliophora)

scientific article published on 16 July 2020

Beyond the "Code": A Guide to the Description and Documentation of Biodiversity in Ciliated Protists (Alveolata, Ciliophora).

scientific article

Biodiversity of marine scuticociliates (Protozoa, Ciliophora) from China: Description of seven morphotypes including a new species, Philaster sinensis spec. nov.

scientific article published on 25 February 2015

Characterizing dose-responses of catalase to nitrofurazone exposure in model ciliated protozoan Euplotes vannus for ecotoxicity assessment: enzyme activity and mRNA expression

scientific article published on 26 September 2013

Ciliates — Protists with complex morphologies and ambiguous early fossil record

scholarly article by Micah Dunthorn published in September 2015

Comparative Transcriptome Analyses during the Vegetative Cell Cycle in the Mono-Cellular Organism Pseudokeronopsis erythrina (Alveolata, Ciliophora)

scientific article published on 12 January 2020

Corrigendum to "Two New Brackish Ciliates, Amphileptus spiculatus sp. n. and A. bellus sp. n. from Mangrove Wetlands in Southern China, with Notes on the Molecular Phylogeny of the Family Amphileptidae (Protozoa, Ciliophora, Pleurostomatida) by Wu e

scientific article

Diversity Patterns of Protists Are Highly Affected by Methods Disentangling Biological Variants: A Case Study in Oligotrich (s.l.) Ciliates

scientific article published on 27 April 2022

Diversity of oligotrich ciliates (Ciliophora, Spirotrichea) in the northern coast of South China Sea as revealed in LSU rDNA sequences

scholarly article

Environmental Parameters and Substrate Type Drive Microeukaryotic Community Structure During Short-Term Experimental Colonization in Subtropical Eutrophic Freshwaters

scientific article published on 24 September 2020

Evolution of the Order Urostylida (Protozoa, Ciliophora): New Hypotheses Based on Multi-Gene Information and Identification of Localized Incongruence ⬇️

scientific article published on March 8, 2011

Evolution of the germline actin gene in hypotrichous ciliates: multiple nonscrambled IESs at extremely conserved locations in two urostylids

scientific article published on 15 September 2014

Four ciliate-specific expansion events occurred during actin gene family evolution of eukaryotes ⬇️

scientific article published in April 2023

Further insights into the phylogeny of two ciliate classes Nassophorea and Prostomatea (Protista, Ciliophora).

scientific article

Genetic differentiation of the mitochondrial cytochrome oxidase C subunit I gene in genus Paramecium (Protista, Ciliophora)

scientific article

High throughput sequencing of microbial eukaryotes in Lake Baikal reveals ecologically differentiated communities and novel evolutionary radiations

scientific article

Increasing taxon sampling using both unidentified environmental sequences and identified cultures improves phylogenetic inference in the Prorodontida (Ciliophora, Prostomatea).

scientific article published on 10 August 2010

Intra-population genetic diversity and its effects on outlining genetic diversity of ciliate populations: Using Paramecium multimicronucleatum as an example

scientific article published on 27 December 2018

Macronuclear Actin copy number variations in single cells of different Pseudokeronopsis (Alveolata, Ciliophora) populations

scientific article

Molecular phylogeny and species separation of five morphologically similar Holosticha-complex ciliates (Protozoa, Ciliophora) using ARDRA riboprinting and multigene sequence data

scholarly article by Feng Gao et al published May 2010 in Chinese journal of oceanology and limnology

Molecular phylogeny of oligotrich genera Omegastrombidium and Novistrombidium (Protozoa, Ciliophora) for the systematical relationships within Family Strombidiidae

scholarly article by Qianqian Zhang et al published 29 June 2010 in Chinese journal of oceanology and limnology

Morphogenesis of the marine ciliate, Pseudoamphisiella alveolata (Kahl, 1932) Song & Warren, 2000 (Ciliophora, Stichotrichia, Urostylida) during binary fission.

scientific article

Morphogenesis of the marine spirotrichous ciliate, Trachelostyla pediculiformis (Cohn, 1866) (Ciliophora, Stichotrichia), with consideration of its phylogenetic position

scientific article published on 17 September 2007

Morphologic and molecular data suggest that Lynnella semiglobulosa n. g., n. sp. represents a new family within the subclass Choreotrichia (Ciliophora, Spirotrichea) ⬇️

scientific article

Morphological and molecular characterization of Aspidisca hongkongensis spec. nov. (Ciliophora, Euplotida) from the South China Sea.

scientific article

Morphology and Molecular Phylogeny of Three Cyrtophorid Ciliates (Protozoa, Ciliophora) from China, Including Two New Species, Chilodonella parauncinata sp. n. and Chlamydonella irregularis sp. n.

scientific article

Morphology and Phylogenetic Placement of Three New Zoothamnium species (Ciliophora: Peritrichia) from Coastal Waters of Southern China

scientific article

Morphology and SSU rRNA gene-based phylogeny of three peniculid ciliates (Ciliophora, Oligohymenophorea) from China, including a new Frontonia species ⬇️

scientific article published in August 2022

Morphology and infraciliature of two new marine urostylid ciliates: Metaurostylopsis struederkypkeae n. sp. and Thigmokeronopsis stoecki n. sp. (Ciliophora, Hypotrichida) from China

scientific article

Morphology and molecular phylogeny of three new oligotrich ciliates (Protozoa, Ciliophora) from the South China Sea

scientific article published on 21 July 2015

Morphology and molecular phylogeny of two new soil ciliates, Hemiurosomoida warreni nov. spec. and Hemiurosoma clampi nov. spec. (Ciliophora, Hypotrichia) from Tibet

scientific article published on 04 November 2020

Morphology and molecular phylogeny of two new species of Spirostrombidium (Ciliophora, Oligotrichia), with a key to the species of Spirostrombidium

scholarly article by Rui Wang et al published 4 October 2018 in Systematics and Biodiversity

Morphology and morphogenesis of a new marine ciliate, Apokeronopsis bergeri nov. spec. (Ciliophora, Hypotrichida), from the Yellow Sea, China

scientific article

Morphology and phylogenetic analysis of two oxytrichid soil ciliates from China, Oxytricha paragranulifera n. sp. and Oxytricha granulifera Foissner and Adam, 1983 (Protista, Ciliophora, Hypotrichia).

scientific article

Morphology and phylogeny of three new Loxophyllum species (ciliophora, pleurostomatida) from mangrove wetlands of southern China

scientific article published on 25 March 2013

Multi-gene-based phylogenetic analysis of oligotrich ciliates with emphasis on two dominant groups: Cyrtostrombidiids and strombidiids (Protozoa, Ciliophora).

scientific article

New taxa refresh the phylogeny and classification of pleurostomatid ciliates (Ciliophora, Litostomatea) ⬇️

scientific article published on 6 September 2016

Phylogenetic analyses suggest thatPsammomitra(Ciliophora, Urostylida) should represent an urostylid family, based on small subunit rRNA and alpha-tubulin gene sequence information

article

Phylogenetic analysis and taxonomic distinction of six genera of pathogenic scuticociliates (Protozoa, Ciliophora) inferred from small-subunit rRNA gene sequences

scientific article

Phylogenetic and Taxonomic Revision of an Enigmatic Group of Haptorian Ciliates, with Establishment of the Kentrophyllidae fam. n. (Protozoa, Ciliophora, Litostomatea, Pleurostomatida).

scientific article

Phylogenetic consideration of two scuticociliate genera, Philasterides and Boveria (Protozoa, Ciliophora) based on 18 S rRNA gene sequences

scientific article

Phylogenetic investigation on five genera of tintinnid ciliates (Ciliophora, Choreotrichia), based on the small subunit ribosomal RNA gene sequences

article

Phylogeny of six genera of the subclass Haptoria (Ciliophora, Litostomatea) inferred from sequences of the gene coding for small subunit ribosomal RNA

scientific article

Phylogeny of six oligohymenophoreans (Protozoa, Ciliophora) inferred from small subunit rRNA gene sequences

article

Phylogeny of some systematically uncertain urostyloids--Apokeronopsis, Metaurostylopsis, Thigmokeronopsis (Ciliophora, Stichotrichia) estimated with small subunit rRNA gene sequence information: discrepancies and agreements with morphological data.

scientific article

Phylogeny of the families Zoothamniidae and Epistylididae (Protozoa: Ciliophora: Peritrichia) based on analyses of three rRNA-coding regions

scientific article

Phylogeny of three choreotrich genera (Protozoa, Ciliophora, Spirotrichea), with morphological, morphogenetic and molecular investigations on three strobilidiid species

scholarly article by Weiwei Liu et al published 9 April 2012 in Zoologica Scripta

Progress in studies on the diversity and distribution of planktonic ciliates (Protista, Ciliophora) in the South China Sea

scientific article published on 6 November 2020

Recognizing the importance of exposure-dose-response dynamics for ecotoxicity assessment: nitrofurazone-induced antioxidase activity and mRNA expression in model protozoan Euplotes vannus

scientific article published on 29 January 2015

Reconsideration of systematic relationships within the order Euplotida (Protista, Ciliophora) using new sequences of the gene coding for small-subunit rRNA and testing the use of combined data sets to construct phylogenies of the Diophrys-complex

scientific article

Redescriptions of three trachelocercid ciliates (Protista, Ciliophora, Karyorelictea), with notes on their phylogeny based on small subunit rRNA gene sequences

scientific article

Redescriptions of two marine hypotrichous ciliates, Diophrys irmgard and D. hystrix (Ciliophora, Euplotida), with a brief revision of the genus Diophrys

scientific article published on May 2007

Sampling strategies for improving tree accuracy and phylogenetic analyses: a case study in ciliate protists, with notes on the genus Paramecium

scientific article

Small subunit rRNA phylogenies show that the class nassophorea is not monophyletic (Phylum Ciliophora).

scientific article published in July 2009

Species delimitation for the molecular taxonomy and ecology of the widely distributed microbial eukaryote genus Euplotes (Alveolata, Ciliophora).

scientific article published in January 2018

Systematic studies on ciliates (Alveolata, Ciliophora) in China: Progress and achievements based on molecular information

scientific article

Taxonomic studies on three marine species of Frontonia from northern China: F. didieri n. sp., F. multinucleata n. sp. and F. tchibisovae Burkovsky, 1970 (Ciliophora: Peniculida) ⬇️

scientific article published on 23 January 2008

Taxonomy and molecular systematics of three oligotrich (s.l.) ciliates including descriptions of two new species, Strombidium guangdongense sp. nov. and Strombidinopsis sinicum sp. nov. (Protozoa, Ciliophora)

scholarly article by Weiwei Liu et al published 4 April 2016 in Systematics and Biodiversity

Taxonomy and phylogeny of two species of the genus Deviata (Protista, Ciliophora) from China, with description of a new soil form, Deviata parabacilliformis sp. nov.

scientific article

Taxonomy, Morphology and Phylogeny of a New Oligotrich Ciliate–Omegastrombidium hongkongense n. sp. (Protozoa: Ciliophora) from Clear Water Bay, Hong Kong ⬇️

scientific article published on 10 July 2018

Taxonomy, morphology and molecular systematics of a new oligotrich ciliate,Williophrya maedai gen. nov., sp. nov., with redescriptions of Strombidium basimorphum and Pseudotontonia simplicidens (Protozoa, Ciliophora, Oligotrichia)

scholarly article by WEIWEI LIU et al published 25 August 2011 in Systematics and Biodiversity

The All-Data-Based Evolutionary Hypothesis of Ciliated Protists with a Revised Classification of the Phylum Ciliophora (Eukaryota, Alveolata)

scientific article (publication date: 29 April 2016)

The morphology of three Loxophyllum species (Ciliophora, Pleurostomatida) from southern China, L. lembum sp. n., L. vesiculosum sp. n. and L. perihoplophorum Buddenbrock, 1920, with notes on the molecular phylogeny of Loxophyllum

scientific article

The morphology, morphogenesis and SSrRNA gene sequence of a new marine ciliate, Diophrys apoligothrix spec. nov. (Ciliophora; Euplotida).

scientific article

The morphology, ontogeny, and small subunit rRNA gene sequence analysis of Diophrys parappendiculata n. sp. (Protozoa, Ciliophora, Euplotida), a new marine ciliate from coastal waters of southern China

scientific article

The systematic position of Paraspathidium Noland, 1937 (Ciliophora, Litostomatea?) inferred from primary SSU rRNA gene sequences and predicted secondary rRNA structure

scientific article

Two New Brackish Ciliates, Amphileptus spiculatus sp. n. and A. bellus sp. n. from Mangrove Wetlands in Southern China, with Notes on the Molecular Phylogeny of the Family Amphileptidae (Protozoa, Ciliophora, Pleurostomatida).

scientific article

Two New Genera of Planktonic Ciliates and Insights into the Evolution of the Family Strombidiidae (Protista, Ciliophora, Oligotrichia)

scientific article

Two new scuticociliates from southern China: Uronema apomarinum sp. nov. and Homalogastra parasetosa sp. nov., with improved diagnoses of the genus Homalogastra and its type species Homalogastra setosa (Ciliophora, Oligohymenophorea)

scientific article published on 01 April 2020

Updating Biodiversity Studies in Loricate Protists: The Case of the Tintinnids (Alveolata, Ciliophora, Spirotrichea).

scientific article published on 10 February 2016

Utility of combining morphological characters, nuclear and mitochondrial genes: An attempt to resolve the conflicts of species identification for ciliated protists

scientific article published on 2 November 2015

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