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List of works by Ruben O Donis

A Phylogeny-Based Global Nomenclature System and Automated Annotation Tool for H1 Hemagglutinin Genes from Swine Influenza A Viruses

scientific article

A broadly neutralizing anti-influenza antibody reveals ongoing capacity of haemagglutinin-specific memory B cells to evolve

scientific article published on 13 September 2016

A broadly protective vaccine against globally dispersed clade 1 and clade 2 H5N1 influenza viruses.

scientific article

A candidate H1N1 pandemic influenza vaccine elicits protective immunity in mice

scientific article

A distinct lineage of influenza A virus from bats

scientific article

A high diversity of Eurasian lineage low pathogenicity avian influenza A viruses circulate among wild birds sampled in Egypt

scientific article

A novel, highly selective inhibitor of pestivirus replication that targets the viral RNA-dependent RNA polymerase

scientific article

A potent broad-spectrum protective human monoclonal antibody crosslinking two haemagglutinin monomers of influenza A virus

scientific article

A quantitative genotype algorithm reflecting H5N1 Avian influenza niches

scientific article published on 10 July 2007

A replicon trans-packaging system reveals the requirement of nonstructural proteins for the assembly of bovine viral diarrhea virus (BVDV) virion

scientific article published on 26 March 2009

Adaptation of a Duck Influenza A Virus in Quail ⬇️

scientific article published on November 16, 2011

Adenoviral vector expressing murine β-defensin 2 enhances immunogenicity of an adenoviral vector based H5N1 influenza vaccine in aged mice

scientific article published on 23 July 2013

An Anti-Influenza Virus Antibody Inhibits Viral Infection by Reducing Nucleus Entry of Influenza Nucleoprotein

scientific article published on 29 October 2015

Antigenic analyses of highly pathogenic avian influenza a viruses.

scientific article

Antigenic and genetic diversity of highly pathogenic avian influenza A (H5N1) viruses isolated in Egypt

scientific article

Antiviral activity and increased host defense against influenza infection elicited by the human cathelicidin LL-37

scientific article

Assessment of route of administration and dose escalation for an adenovirus-based influenza A Virus (H5N1) vaccine in chickens

scientific article

Attenuated strains of influenza A viruses do not induce degradation of RNA polymerase II.

scientific article published on 19 August 2009

Avian influenza (H5N1) viruses isolated from humans in Asia in 2004 exhibit increased virulence in mammals

scientific article

Avian influenza surveillance in domestic waterfowl and environment of live bird markets in Bangladesh, 2007-2012.

scientific article published on 20 June 2018

Avian influenza virus A (H5N1), detected through routine surveillance, in child, Bangladesh

scientific article

Avian influenza: an omnipresent pandemic threat.

scientific article

Beta-defensin 2 enhances immunogenicity and protection of an adenovirus-based H5N1 influenza vaccine at an early time

scientific article

Bovine viral diarrhea virus as a surrogate model of hepatitis C virus for the evaluation of antiviral agents ⬇️

scientific article published on September 1, 2003

Bovine viral diarrhea virus genomic associations in mucosal disease, enteritis and generalized dermatitis outbreaks in Argentina ⬇️

scientific article published on October 17, 2003

Broadly protective adenovirus-based multivalent vaccines against highly pathogenic avian influenza viruses for pandemic preparedness

scientific article

Cell culture-derived influenza vaccines in the severe 2017-2018 epidemic season: a step towards improved influenza vaccine effectiveness

article

Characterization of a highly pathogenic avian influenza H5N1 virus sublineage in poultry seized at ports of entry into Vietnam

scientific article published on 2 April 2009

Comparative immunogenicity and cross-clade protective efficacy of mammalian cell-grown inactivated and live attenuated H5N1 reassortant vaccines in ferrets

scientific article

Comparative virulence of isolates of bovine viral diarrhea virus type II in experimentally inoculated six- to nine-month-old calves

scientific article published on October 2002

Comparison of human fetal liver, umbilical cord blood, and adult blood hematopoietic stem cell engraftment in NOD-scid/gammac-/-, Balb/c-Rag1-/-gammac-/-, and C.B-17-scid/bg immunodeficient mice

scientific article

Comparison of viral replication and IFN response in alpaca and bovine cells following bovine viral diarrhea virus infection ⬇️

scientific article published on February 26, 2011

Contemporary North American influenza H7 viruses possess human receptor specificity: Implications for virus transmissibility.

scholarly article

Crystal structures of two subtype N10 neuraminidase-like proteins from bat influenza A viruses reveal a diverged putative active site ⬇️

scientific article published on September 24, 2012

Cytoplasmic vacuolization responses to cytopathic bovine viral diarrhoea virus

scientific article

Detecting Spread of Avian Influenza A(H7N9) Virus Beyond China

scientific article published on May 2015

Detection and characterization of clade 7 high pathogenicity avian influenza H5N1 viruses in chickens seized at ports of entry and live poultry markets in Vietnam

scientific article

Detection and quantitation of bovine respiratory syncytial virus using real-time quantitative RT-PCR and quantitative competitive RT-PCR assays

scientific article published on October 2004

Detection of H5 avian influenza viruses by antigen-capture enzyme-linked immunosorbent assay using H5-specific monoclonal antibody

scientific article published on 7 March 2007

Development and evaluation of an Influenza virus subtype H7N2 vaccine candidate for pandemic preparedness ⬇️

scientific article

Development of Eurasian H7N7/PR8 high growth reassortant virus for clinical evaluation as an inactivated pandemic influenza vaccine.

scientific article

Development of a new candidate H5N1 avian influenza virus for pre-pandemic vaccine production

scientific article

Development of epitope-blocking ELISA for universal detection of antibodies to human H5N1 influenza viruses

scientific article

Development of influenza A(H7N9) candidate vaccine viruses with improved hemagglutinin antigen yield in eggs.

scientific article

Discrimination between highly pathogenic and low pathogenic H5 avian influenza A viruses

scientific article

Diversity of the murine antibody response targeting influenza A(H1N1pdm09) hemagglutinin

scientific article

Dynamic of H5N1 virus in Cambodia and emergence of a novel endemic sub-clade.

scientific article

Effect of receptor binding domain mutations on receptor binding and transmissibility of avian influenza H5N1 viruses ⬇️

scientific article published on March 23, 2011

Effect of the viral protein N(pro) on virulence of bovine viral diarrhea virus and induction of interferon type I in calves

scientific article published on September 2009

Emergence and dissemination of clade 2.3.4.4 H5Nx influenza viruses-how is the Asian HPAI H5 lineage maintained

scientific article published on 15 March 2016

Emergence of Highly Pathogenic Avian Influenza A(H5N1) Virus PB1-F2 Variants and Their Virulence in BALB/c Mice.

scientific article published on 18 March 2015

Emergence of multiple clade 2.3.2.1 influenza A (H5N1) virus subgroups in Vietnam and detection of novel reassortants

scientific article published on 10 July 2013

Establishment and characterization of a Madin-Darby canine kidney reporter cell line for influenza A virus assays

scientific article

Establishment of a subgenomic replicon for bovine viral diarrhea virus in Huh-7 cells and modulation of interferon-regulated factor 3-mediated antiviral response.

scientific article published on March 2005

Evolution of canine and equine influenza (H3N8) viruses co-circulating between 2005 and 2008 ⬇️

scientific article published on September 29, 2010

Evolution of highly pathogenic H5N1 avian influenza viruses in Vietnam between 2001 and 2007.

scientific article

Evolution of highly pathogenic avian influenza (H5N1) virus populations in Vietnam between 2007 and 2010.

scientific article published on 20 July 2012

Evolutionary History and Phylodynamics of Influenza A and B Neuraminidase (NA) Genes Inferred from Large-Scale Sequence Analyses ⬇️

scientific article published on July 11, 2012

Evolutionary dynamics of influenza A nucleoprotein (NP) lineages revealed by large-scale sequence analyses ⬇️

scientific article published on July 7, 2011

Exposure science for viral diseases: 2009 H1N1 pandemic influenza virus ⬇️

scientific article published on November 24, 2010

Exposure to Cigarette Smoke Inhibits the Pulmonary T-Cell Response to Influenza Virus and Mycobacterium tuberculosis ⬇️

scientific article published on October 25, 2010

Expression of the mouse Fc receptor B2 in bovine cells rescues the infectivity of conditionally neutralized bovine viral diarrhea virus

scientific article published on March 2002

FAO-OIE-WHO Joint Technical Consultation on Avian Influenza at the Human-Animal Interface

scientific article published in May 2010

Fine epitope mapping of monoclonal antibodies against hemagglutinin of a highly pathogenic H5N1 influenza virus using yeast surface display ⬇️

scientific article published on May 5, 2011

First isolation of an H1N1 avian influenza virus from wild terrestrial non-migratory birds in Argentina

scientific article

Flexible label-free quantitative assay for antibodies to influenza virus hemagglutinins

scientific article

FluGenome: a web tool for genotyping influenza A virus

scientific article published on 30 May 2007

GM-CSF in the Lung Protects against Lethal Influenza Infection

scientific article published on 07 April 2011

Generation and characterization of candidate vaccine viruses for prepandemic influenza vaccines

scientific article

Genetic analysis of avian influenza A viruses isolated from domestic waterfowl in live-bird markets of Hanoi, Vietnam, preceding fatal H5N1 human infections in 2004.

scientific article published on 4 July 2009

Genetic bases of the temperature-sensitive phenotype of a master donor virus used in live attenuated influenza vaccines: A/Leningrad/134/17/57 (H2N2).

scientific article published on 18 February 2011

Genetic characterization of clade 2.3.2.1 avian influenza A(H5N1) viruses, Indonesia, 2012

scientific article

Genetic compatibility and virulence of reassortants derived from contemporary avian H5N1 and human H3N2 influenza A viruses

scientific article

Genetically Diverse Low Pathogenicity Avian Influenza A Virus Subtypes Co-Circulate among Poultry in Bangladesh

scientific article

Hemagglutinin homologue from H17N10 bat influenza virus exhibits divergent receptor-binding and pH-dependent fusion activities ⬇️

scientific article published on January 7, 2013

Highly Pathogenic (H5N1) Avian Influenza Induces an Inflammatory T Helper Type 1 Cytokine Response in the Chicken ⬇️

scientific article published on January 1, 2011

IFITM3 inhibits influenza A virus infection by preventing cytosolic entry

scientific article published in October 2011

Identification of Influenza A/PR/8/34 Donor Viruses Imparting High Hemagglutinin Yields to Candidate Vaccine Viruses in Eggs

scientific article

Identification of molecular markers associated with alteration of receptor-binding specificity in a novel genotype of highly pathogenic avian influenza A(H5N1) viruses detected in Cambodia in 2013

scientific article

Immunocapture isotope dilution mass spectrometry in response to a pandemic influenza threat

scientific article published on 31 July 2017

Impact of Preexisting Adenovirus Vector Immunity on Immunogenicity and Protection Conferred with an Adenovirus-Based H5N1 Influenza Vaccine ⬇️

scientific article published on March 14, 2012

Improved protection against avian influenza H5N1 virus by a single vaccination with virus-like particles in skin using microneedles

scientific article

Improving pandemic influenza risk assessment

scientific article

Improving the selection and development of influenza vaccine viruses - Report of a WHO informal consultation on improving influenza vaccine virus selection, Hong Kong SAR, China, 18-20 November 2015

scientific article

In vitro and in vivo translational efficiencies of the 5' untranslated region from eight genotype 2 bovine viral diarrhea virus field isolates

scientific article published on January 2005

In vitro evolution of H5N1 avian influenza virus toward human-type receptor specificity.

scientific article

Increased immunogenicity of avian influenza DNA vaccine delivered to the skin using a microneedle patch.

scientific article

Induction of long-term protective immune responses by influenza H5N1 virus-like particles.

scientific article

Influenza A viral nucleoprotein interacts with cytoskeleton scaffolding protein α-actinin-4 for viral replication

scientific article

Influenza A virus (H3N8) in dogs with respiratory disease, Florida

scientific article published on June 2008

Influenza vaccination accelerates recovery of ferrets from lymphopenia

scientific article

Influenza virus hemagglutinin--structural studies and their implications for the development of therapeutic approaches.

scientific article

Intragenotypic JFH1 based recombinant hepatitis C virus produces high levels of infectious particles but causes increased cell death

scientific article (publication date: 5 July 2008)

Investigating a crow die-off in January-February 2011 during the introduction of a new clade of highly pathogenic avian influenza virus H5N1 into Bangladesh

scientific article published on October 2013

Involvement of a bovine viral diarrhea virus NS5B locus in virion assembly

scientific article published on September 2004

LABEL: fast and accurate lineage assignment with assessment of H5N1 and H9N2 influenza A hemagglutinins

scientific article published on 23 January 2014

Lack of transmission of H5N1 avian-human reassortant influenza viruses in a ferret model

scientific article

Microevolution of highly pathogenic avian influenza A(H5N1) viruses isolated from humans, Egypt, 2007-2011. ⬇️

scientific article published on January 2013

Microneedle delivery of H5N1 influenza virus-like particles to the skin induces long-lasting B- and T-cell responses in mice

scientific article

Modulation of PKR activity in cells infected by bovine viral diarrhea virus

scientific article published on 27 September 2005

Mucosal priming of simian immunodeficiency virus-specific cytotoxic T-lymphocyte responses in rhesus macaques by the Salmonella type III secretion antigen delivery system

scientific article

Multiple genes contribute to the virulent phenotype observed in ferrets of an H5N1 influenza virus isolated from Thailand in 2004 ⬇️

scientific article published on March 8, 2011

Multiple reassortment events among highly pathogenic avian influenza A(H5N1) viruses detected in Bangladesh

scientific article published on 14 January 2014

NS1 protein of influenza A virus inhibits the function of intracytoplasmic pathogen sensor, RIG-I

scientific article

Neuraminidase stalk length and additional glycosylation of the hemagglutinin influence the virulence of influenza H5N1 viruses for mice

scientific article published on 18 February 2009

New world bats harbor diverse influenza A viruses

scientific article published in 2013

Nomenclature updates resulting from the evolution of avian influenza A(H5) virus clades 2.1.3.2a, 2.2.1, and 2.3.4 during 2013-2014

scientific article published on September 2015

Optimization of the delivery of heterologous proteins by the Salmonella enterica serovar Typhimurium type III secretion system for vaccine development

scientific article

Pandemic (H1N1) 2009 virus revisited: An evolutionary retrospective ⬇️

scientific article published on March 5, 2011

Pathogenesis of avian influenza (H7) virus infection in mice and ferrets: enhanced virulence of Eurasian H7N7 viruses isolated from humans

scientific article

Patterns of cellular gene expression in cells infected with cytopathic or non-cytopathic bovine viral diarrhea virus

scientific article published in May 2003

Pause on avian flu transmission research

scientific article published on January 2012

Performance characteristics of qualified cell lines for isolation and propagation of influenza viruses for vaccine manufacturing

scientific article published on 24 June 2014

Prospecting the influenza hemagglutinin to develop universal vaccines.

scientific article published in April 2011

Protection of mice and poultry from lethal H5N1 avian influenza virus through adenovirus-based immunization

scientific article

Protective immunity against H5N1 influenza virus by a single dose vaccination with virus-like particles

scientific article

Quantification of Immunoreactive Viral Influenza Proteins by Immunoaffinity Capture and Isotope-Dilution Liquid Chromatography–Tandem Mass Spectrometry ⬇️

scientific article published on May 26, 2011

Quantification of influenza virus hemagglutinins in complex mixtures using isotope dilution tandem mass spectrometry.

scientific article

Quantitation of influenza virus using field flow fractionation and multi-angle light scattering for quantifying influenza A particles

scientific article published on 31 July 2013

Rapid and highly informative diagnostic assay for H5N1 influenza viruses

scientific article

Reassortment between avian H5N1 and human H3N2 influenza viruses in ferrets: a public health risk assessment

scientific article published on 03 June 2009

Recent avian H5N1 viruses exhibit increased propensity for acquiring human receptor specificity.

scientific article

Receptor specificity of influenza A H3N2 viruses isolated in mammalian cells and embryonated chicken eggs

scientific article

Receptor specificity of subtype H1 influenza A viruses isolated from swine and humans in the United States ⬇️

scientific article published on February 18, 2011

Replication and transmission of H9N2 influenza viruses in ferrets: evaluation of pandemic potential.

scientific article

Role of bovine viral diarrhea virus biotype in the establishment of fetal infections

scientific article published in October 2002

Role of position 627 of PB2 and the multibasic cleavage site of the hemagglutinin in the virulence of H5N1 avian influenza virus in chickens and ducks

scientific article

So Many Questions, So Little Time ⬇️

scientific article published on October 4, 2012

Structural Stability of Influenza A(H1N1)pdm09 Virus Hemagglutinins

scientific article

Structural and Antigenic Variation among Diverse Clade 2 H5N1 Viruses

scientific article

Structural and functional bases for broad-spectrum neutralization of avian and human influenza A viruses

scientific article

Structure and Receptor Complexes of the Hemagglutinin from a Highly Pathogenic H7N7 Influenza Virus ⬇️

scientific article published on June 6, 2012

Structures of Receptor Complexes of a North American H7N2 Influenza Hemagglutinin with a Loop Deletion in the Receptor Binding Site ⬇️

scientific article published on September 2, 2010

Suboptimal protection against H5N1 highly pathogenic avian influenza viruses from Vietnam in ducks vaccinated with commercial poultry vaccines.

scientific article published on 28 August 2013

The 2009 Pandemic Influenza Virus: Where Did It Come from, Where Is It Now, and Where Is It Going? ⬇️

scientific article published on January 1, 2013

The 3' untranslated regions of influenza genomic sequences are 5'PPP-independent ligands for RIG-I

scientific article

The Virulence of 1997 H5N1 Influenza Viruses in the Mouse Model Is Increased by Correcting a Defect in Their NS1 Proteins ⬇️

scientific article published on May 18, 2011

The amino-terminal domain of bovine viral diarrhea virus Npro protein is necessary for alpha/beta interferon antagonism

scientific article

The development of vaccine viruses against pandemic A(H1N1) influenza ⬇️

scientific article published on February 17, 2011

The envelope glycoprotein E2 is a determinant of cell culture tropism in ruminant pestiviruses ⬇️

scientific article published on May 1, 2003

The influence of the multi-basic cleavage site of the H5 hemagglutinin on the attenuation, immunogenicity and efficacy of a live attenuated influenza A H5N1 cold-adapted vaccine virus

scientific article published on 14 October 2009

Three Indonesian clusters of H5N1 virus infection in 2005

scientific article

Timing of influenza A(H5N1) in poultry and humans and seasonal influenza activity worldwide, 2004-2013

scientific article

Transmission of equine influenza virus to dogs

scientific article

Transmission studies resume for avian flu.

scientific article

Type 2 BVDV Npro suppresses IFN-1 pathway signaling in bovine cells and augments BRSV replication

scientific article published on 19 April 2017

Use of highly pathogenic avian influenza A(H5N1) gain-of-function studies for molecular-based surveillance and pandemic preparedness

scientific article

Validation of a method for preparing influenza H5N1 simulated samples

scientific article published on 01 April 2010

Virus-like particle vaccine containing hemagglutinin confers protection against 2009 H1N1 pandemic influenza

scientific article (publication date: December 2011)

WHO recommendations for the viruses used in the 2013-2014 Northern Hemisphere influenza vaccine: Epidemiology, antigenic and genetic characteristics of influenza A(H1N1)pdm09, A(H3N2) and B influenza viruses collected from October 2012 to January 20

scientific article published on 28 February 2014

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