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List of works by Jacques Schrenzel

2142. Comparison of Molecular-Based vs. Conventional Culture-Based Screening Methods for Detection of Carriers of Extended-Spectrum β-Lactamases (ESBL) and Carbapenemases-Producing Enterobacteriacae (CPE)

30 years of study of Kingella kingae: post tenebras, lux.

scientific article published on February 2013

A Novel Mechanism of Inactivating Antibacterial Nitro Compounds in the Human Pathogen Staphylococcus aureus by Overexpression of a NADH-Dependent Flavin Nitroreductase

scientific article published on 13 November 2017

A community outbreak of Legionnaires' disease in Geneva, Switzerland, June to September 2017

scientific article published on 01 November 2018

A comparison of Sensititre™ Anaerobe MIC plate with ATB ANA® test for the routine susceptibility testing of common anaerobe pathogens

scientific article published on 06 September 2018

A correlative analysis of epidemiologic and molecular characteristics of methicillin-resistant Staphylococcus aureus clones from diverse geographic locations with virulence measured by a Caenorhabditis elegans host model ⬇️

scientific article published on August 18, 2012

A de novo-designed antimicrobial peptide with activity against multiresistant Staphylococcus aureus acting on RsbW kinase

scientific article published on 30 July 2013

A generic approach for the design of whole-genome oligoarrays, validated for genomotyping, deletion mapping and gene expression analysis on Staphylococcus aureus

scientific article

A genomic perspective on a new bacterial genus and species from the Alcaligenaceae family, Basilea psittacipulmonis

scientific article

A global view of Staphylococcus aureus whole genome expression upon internalization in human epithelial cells

scientific article

A molecular based diagnosis of positive blood culture in the context of viral haemorrhagic fever: proof of concept

scientific article published on 06 June 2019

A novel multiplex real-time PCR assay for rapid typing of major staphylococcal cassette chromosome mec elements

scientific article published on July 2004

A nuc-deficient methicillin-resistant Staphylococcus aureus strain

scientific article

A predictive model for identifying surgical patients at risk of methicillin-resistant Staphylococcus aureus carriage on admission

scientific article published on 30 June 2008

A prospective study of intrafamilial oropharyngeal transmission of Kingella kingae.

scientific article published on April 2014

A randomized clinical trial to compare fleroxacin-rifampicin with flucloxacillin or vancomycin for the treatment of staphylococcal infection

scientific article published on 11 October 2004

A recA-LexA-dependent pathway mediates ciprofloxacin-induced fibronectin binding in Staphylococcus aureus

scientific article published on 29 December 2003

A search for small noncoding RNAs in Staphylococcus aureus reveals a conserved sequence motif for regulation

scientific article

A transversal pilot study of oropharyngeal carriage of Kingella kingae in healthy children younger than 6 months

scientific article published on 20 October 2017

A type III-like restriction endonuclease functions as a major barrier to horizontal gene transfer in clinical Staphylococcus aureus strains

scientific article

Accelerated digestion for high-throughput proteomics analysis of whole bacterial proteomes

scientific article

Accelerated photoactivated chromophore for keratitis-corneal collagen cross-linking as a first-line and sole treatment in early fungal keratitis

scientific article

Acute Septic Arthritis of the Knee Caused by Kingella kingae in a 5-Year-Old Cameroonian Boy.

scientific article

Acute partial Budd-Chiari syndrome and portal vein thrombosis in cytomegalovirus primary infection: a case report

scientific article

Altered gut microbiota and endocannabinoid system tone in obese and diabetic leptin-resistant mice: impact on apelin regulation in adipose tissue.

scientific article

Analysis of the salivary microbiome using culture-independent techniques

scientific article published on 2 February 2012

Analysis of the small RNA transcriptional response in multidrug-resistant Staphylococcus aureus after antimicrobial exposure

scientific article

Another small step on the long way to control methicillin-resistant Staphylococcus aureus cross-transmission

scientific article published in January 2010

Antibacterial efficacy of accelerated photoactivated chromophore for keratitis-corneal collagen cross-linking (PACK-CXL).

scientific article published on December 2014

Antibiotic resistance patterns among group B Streptococcus isolates: implications for antibiotic prophylaxis for early-onset neonatal sepsis

scientific article published on 25 March 2013

Antibiotic susceptibility and molecular epidemiology of Panton-Valentine leukocidin-positive meticillin-resistant Staphylococcus aureus: An international survey

scientific article published on 3 September 2013

Antimicrobial activity and cytotoxicity of 3 photosensitizers activated with blue light

scientific article published on 10 January 2014

Antimicrobial activity of ceftaroline against methicillin-resistant Staphylococcus aureus (MRSA) isolates collected in 2013-2014 at the Geneva University Hospitals

scientific article published on 15 October 2016

Application and use of various mass spectrometry methods in clinical microbiology ⬇️

scientific article published on November 1, 2010

Association between oropharyngeal carriage of Kingella kingae and osteoarticular infection in young children: a case-control study

scientific article published on September 2017

Atypical presentation of Lemierre's syndrome: case report and literature review

scientific article published on 21 October 2019

Automated Incubation and Digital Image Analysis of Chromogenic Media Using Copan WASPLab Enables Rapid Detection of Vancomycin-Resistant Enterococcus

scientific article published on 06 November 2019

Azole Resistance of Environmental and Clinical Aspergillus fumigatus Isolates from Switzerland

scientific article published on 5 February 2018

Bacterial Diversity in Oral Samples of Children in Niger with Acute Noma, Acute Necrotizing Gingivitis, and Healthy Controls ⬇️

scientific article published on March 6, 2012

Bacterial contamination of the hands of intensive care unit staff during respiratory tract care: preliminary results.

scientific article published on 16 June 2015

Bacterial genome evolution within a clonal population: from in vitro investigations to in vivo observations

scientific article published on May 2013

Bacterial genomics and metagenomics: clinical applications and medical relevance

scientific article published on November 2014

Bench-to-bedside review: Rapid molecular diagnostics for bloodstream infection--a new frontier?

scientific article

Blue light-mediated inactivation of Enterococcus faecalis in vitro

scientific article published on 5 December 2012

Bordetella holmesii: an under-recognised Bordetella species

scientific article published on 07 April 2014

Burden of bloodstream infection caused by extended-spectrum β-lactamase-producing enterobacteriaceae determined using multistate modeling at a Swiss University Hospital and a nationwide predictive model

scientific article

Burden of meticillin-resistant Staphylococcus aureus infections at a Swiss University hospital: excess length of stay and costs ⬇️

scientific article published on April 19, 2013

CC9 livestock-associated Staphylococcus aureus emerges in bloodstream infections in French patients unconnected with animal farming

scientific article

Capnocytophaga canimorsus prosthetic aortitis in an HIV-positive woman

scientific article published on 22 May 2013

Carriage of extended-spectrum beta-lactamase-producing enterobacteriacae among internal medicine patients in Switzerland

scientific article published on 12 June 2013

Carriage of healthcare-associated methicillin-resistant Stapyloccous aureus and empiric treatment for skin and soft tissue infections

scientific article

Cartography of methicillin-resistant S. aureus transcripts: detection, orientation and temporal expression during growth phase and stress conditions

scientific article (publication date: 20 May 2010)

Catheter retention as a consequence rather than a cause of unfavorable outcome in candidemia.

scientific article

Ceftazidime-resistant Klebsiella oxytoca producing an OXY-2-type variant from Switzerland

scientific article published on 3 July 2008

Challenges in the culture-independent analysis of oral and respiratory samples from intubated patients

scientific article

Changes in Microbiota Profiles After Prolonged Frozen Storage of Stool Suspensions

scientific article published on 28 February 2020

Characteristics of multidrug-resistant Acinetobacter baumannii strains isolated in Geneva during colonization or infection

scientific article

Characterization of Streptococcus tigurinus small-colony variants causing prosthetic joint infection by comparative whole-genome analyses

scientific article

Characterization of microbial pathogens by DNA microarrays

scientific article

Clinical Metagenomics for the Diagnostic of Hospital-acquired Infections: Promises and Hurdles

scientific article published on 5 July 2017

Clinical metagenomics for the management of hospital- and healthcare-acquired pneumonia.

scientific article

Clinical relevance of new diagnostic methods for bloodstream infections

scientific article published on 19 September 2007

Clonal or not clonal? Investigating hospital outbreaks of KPC-producing Klebsiella pneumoniae with whole-genome sequencing.

scientific article

CodY in Staphylococcus aureus: a Regulatory Link between Metabolism and Virulence Gene Expression.

scientific article published in July 2009

CodY in Staphylococcus aureus: a regulatory link between metabolism and virulence gene expression

scientific article published on 27 February 2009

Colistin Heteroresistance and Involvement of the PmrAB Regulatory System in Acinetobacter baumannii

scientific article published in 2018

Collateral damage from oral ciprofloxacin versus nitrofurantoin in outpatients with urinary tract infections: a culture-free analysis of gut microbiota

scientific article published on 25 November 2014

Comparative Genomics of Community-Associated Methicillin-Resistant Staphylococcus aureus Shows the Emergence of Clone ST8-USA300 in Geneva, Switzerland.

scientific article

Comparative Transcriptomic and Functional Assessments of Linezolid-Responsive Small RNA Genes in Staphylococcus aureus

scientific article published on 07 January 2020

Comparative analysis and validation of different assays for glycopeptide susceptibility among methicillin-resistant Staphylococcus aureus strains

scientific article published in May 2004

Comparative analysis of PCR-electrospray ionization/mass spectrometry (MS) and MALDI-TOF/MS for the identification of bacteria and yeast from positive blood culture bottles

scientific article

Comparative efficacy of daptomycin and vancomycin in the therapy of experimental foreign body infection due to Staphylococcus aureus

scientific article published on 29 May 2003

Comparative genomic hybridization and physiological characterization of environmental isolates indicate that significant (eco-)physiological properties are highly conserved in the species Escherichia coli

scientific article published in July 2007

Comparative genomics of epidemic versus sporadic Staphylococcus aureus strains does not reveal molecular markers for epidemicity

scientific article published on 31 October 2009

Comparative genomics to investigate the emergence of community-associated methicillin-resistant Staphylococcus aureus (CA-MRSA) USA300 clone in Geneva, Switzerland.

scientific article published on 16 June 2015

Comparing the oropharyngeal colonization density of Kingella kingae between asymptomatic carriers and children with invasive osteoarticular infections.

scientific article published in April 2013

Comparison of DNA extraction methods in analysis of salivary bacterial communities

scientific article published on 03 July 2013

Comparison of amplification methods for transcriptomic analyses of low abundance prokaryotic RNA sources

scientific article published on 15 November 2006

Comparison of analytical performances of the Roche Cobas 6800 CT/NG assay with the Abbott m2000 Real Time CT/NG assay for detecting Chlamydia trachomatis and Neisseria gonorrhoeae

scientific article published on 03 January 2019

Comparison of fluorescence and resonance light scattering for highly sensitive microarray detection of bacterial pathogens

scientific article

Comparison of four chromogenic media for culture-based screening of meticillin-resistant Staphylococcus aureus

scientific article published in April 2007

Comparison of levofloxacin, alatrofloxacin, and vancomycin for prophylaxis and treatment of experimental foreign-body-associated infection by methicillin-resistant Staphylococcus aureus

scientific article

Comparison of the Copan WASPLab incorporating the BioRad expert system against the SIRscan 2000 automatic for routine antimicrobial disc diffusion susceptibility testing

scientific article published on 13 November 2019

Comparison of two matrix-assisted laser desorption ionization-time of flight mass spectrometry methods with conventional phenotypic identification for routine identification of bacteria to the species level

scientific article

Confident identification of filamentous fungi by matrix-assisted laser desorption/ionization time-of-flight mass spectrometry without subculture-based sample preparation

scientific article published on 23 April 2015

Contamination of stethoscopes and physicians' hands after a physical examination

scientific article published in March 2014

Control of Infectious Diseases in the Era of European Clinical Microbiology Laboratory Consolidation: New Challenges and Opportunities for the Patient and for Public Health Surveillance

scientific article published on 2 February 2018

Copan WASPLab automation significantly reduces incubation times and allows earlier culture readings

scientific article published on 12 April 2019

Core genome conservation of Staphylococcus haemolyticus limits sequence based population structure analysis

scientific article published on 30 March 2012

Correction to: Catheter retention as a consequence rather than a cause of unfavorable outcome in candidemia

scientific article published on 20 February 2018

Correction to: Management and investigation of a Serratia marcescens outbreak in a neonatal unit in Switzerland - the role of hand hygiene and whole genome sequencing

scientific article

Correlation of daptomycin resistance in a clinical Staphylococcus aureus strain with increased cell wall teichoic acid production and D-alanylation.

scientific article

Correlation of proteomic and transcriptomic profiles of Staphylococcus aureus during the post-exponential phase of growth

scientific article published in February 2005

Daptomycin Tolerance in the Staphylococcus aureus pitA6 Mutant Is Due to Upregulation of the dlt Operon

scientific article

Daptomycin resistance mechanisms in clinically derived Staphylococcus aureus strains assessed by a combined transcriptomics and proteomics approach

scientific article

De novo bacterial genome sequencing: millions of very short reads assembled on a desktop computer

scientific article published on 10 March 2008

De novo finished 2.8 Mbp Staphylococcus aureus genome assembly from 100 bp short and long range paired-end reads.

scientific article published on 15 October 2013

Decolonization of intestinal carriage of extended-spectrum β-lactamase-producing Enterobacteriaceae with oral colistin and neomycin: a randomized, double-blind, placebo-controlled trial

scientific article

Decontamination of 16S rRNA gene amplicon sequence datasets based on bacterial load assessment by qPCR

scientific article

Detection of Bacterial Pathogens from Broncho-Alveolar Lavage by Next-Generation Sequencing

scientific article published on 20 September 2017

Detection of Kingella kingae osteoarticular infections in children by oropharyngeal swab PCR.

scientific article

Determinants of Successful Methicillin-Resistant Staphylococcus aureus Decolonization

scientific article

Determinants of successful mrsa decolonization among patients included in a clinical trial of polyhexanide.

scientific article published on 16 June 2015

Development and evaluation of a rapid strategy to determine enterotoxin gene content in Staphylococcus aureus.

scientific article published on 5 February 2009

Development and validation of a modified broad-range 16S rDNA PCR for diagnostic purposes in clinical microbiology.

scientific article

Development of a method for recovering rickettsial RNA from infected cells to analyze gene expression profiling of obligate intracellular bacteria

Development of a rapid PCR assay for screening of maternal colonization by group B streptococcus and neonatal invasive Escherichia coli during labor.

scientific article published on 16 October 2010

Development of in vitro resistance to chitosan is related to changes in cell envelope structure of Staphylococcus aureus

scientific article published on 26 September 2016

Diagnosis of bacterial gastroenteritis

scientific article published on April 2015

Diagnosis of whooping cough in Switzerland: differentiating Bordetella pertussis from Bordetella holmesii by polymerase chain reaction

scientific article published on 19 February 2014

Diagnostic approach of intracellular bacteria and fastidious microorganisms

scientific article

Differentiating osteoarticular infections caused by Kingella kingae from those due to typical pathogens in young children

scientific article published in October 2011

Discordant Clostridioides difficile diagnostic assay and treatment practice: a cross-sectional study in a tertiary care hospital, Geneva, Switzerland

scientific article published on 13 September 2020

Disrupting Myelin-Specific Th17 Cell Gut Homing Confers Protection in an Adoptive Transfer Experimental Autoimmune Encephalomyelitis

scientific article published on 01 October 2019

Does colonization with methicillin-susceptible Staphylococcus aureus protect against nosocomial acquisition of methicillin-resistant S. aureus?

scientific article

Draft Genome Sequence of Kingella negevensis SW7208426, the First European Strain of K. negevensis Isolated from a Healthy Child in Switzerland

scientific article published on 29 June 2017

ESBL and carbapenemases in Enterobacteriaceae

scientific article published on November 2014

Ecthyma Gangrenosum: Escherichia coli or Pseudomonas aeruginosa?

scientific article

Effect of Periodontal Therapy With Amoxicillin-Metronidazole on Pharyngeal Carriage of Penicillin- and Erythromycin-Resistant Viridans Streptococci

scientific article

Effect of a glucose impulse on the CcpA regulon in Staphylococcus aureus

scientific article

Effect of screening for methicillin-resistant Staphylococcus aureus carriage by polymerase chain reaction on the duration of unnecessary preemptive contact isolation.

scientific article

Effect of vancomycin therapy for osteomyelitis on colonization by methicillin-resistant Staphylococcus aureus: lack of emergence of glycopeptide resistance

scientific article published in September 2003

Emergence of ESBL-producing Escherichia coli ST131-C1-M27 clade colonizing patients in Europe

scientific article published on 01 November 2018

Emergence of OXA-48-producing Enterobacteriaceae in Switzerland.

scientific article published on 4 October 2012

Emergence of unusual bloodstream infections associated with pig-borne-like Staphylococcus aureus ST398 in France

article

Epidemiology and clinical implications of carbapenemase-producing bacteria in Switzerland

scientific article published on April 25, 2012

Epidemiology and virulence insights from MRSA and MSSA genome analysis

scientific article

Epidemiology of methicillin-resistant Staphylococcus aureus carriage and MRSA surgical site infections in patients undergoing colorectal surgery: a cohort study in two centers

scientific article

Establishing Genotype-to-Phenotype Relationships in Bacteria Causing Hospital-Acquired Pneumonia: A Prelude to the Application of Clinical Metagenomics

scientific article published on 29 November 2017

Estimating the association between antibiotic exposure and colonization with extended-spectrum β-lactamase-producing Gram-negative bacteria using machine learning methods: a multicentre, prospective cohort study

scientific article published on 23 May 2019

Evaluating the probability of previously unknown carriage of MRSA at hospital admission

scientific article

Evaluation of a high-density oligonucleotide array for characterization of grlA, grlB, gyrA and gyrB mutations in fluoroquinolone resistant Staphylococcus aureus isolates.

scientific article published in February 2005

Evaluation of matrix-assisted laser desorption ionization-time of flight mass spectrometry for rapid identification of Beta-hemolytic streptococci

scientific article

Evaluation of rapid screening and pre-emptive contact isolation for detecting and controlling methicillin-resistant Staphylococcus aureus in critical care: an interventional cohort study

scientific article

Evaluation of three molecular assays for rapid identification of methicillin-resistant Staphylococcus aureus

scientific article published on 11 April 2007

Evidence of an intracellular reservoir in the nasal mucosa of patients with recurrent Staphylococcus aureus rhinosinusitis

scientific article published on 9 August 2005

Evidence of horizontal gene transfer between human and animal commensal Escherichia coli strains identified by microarray.

scientific article

Exploring glycopeptide-resistance in Staphylococcus aureus: a combined proteomics and transcriptomics approach for the identification of resistance-related markers.

scientific article

Extended-spectrum β-lactamase-producing Enterobacteriaceae in hospital food: a risk assessment

scientific article published in April 2014

FOOD POISONING AS A CAUSE OF ACUTE LIVER FAILURE

scientific article published on 01 September 2008

Failures in clinical treatment of Staphylococcus aureus Infection with daptomycin are associated with alterations in surface charge, membrane phospholipid asymmetry, and drug binding

scientific article

Fast identification of dermatophytes by MALDI-TOF/MS using direct transfer of fungal cells on ground steel target plates

scientific article published on 20 June 2018

Fecal microbiota transplantation: a promising strategy in preventing the progression of non-alcoholic steatohepatitis and improving the anti-cancer immune response

scientific article published on 10 September 2018

Fine-tuned characterization of Staphylococcus aureus Newbould 305, a strain associated with mild and chronic mastitis in bovines.

scientific article

First case of Streptococcus suis infection in Switzerland: An emerging public health problem?

scientific article published on 05 March 2020

Flow cytometric assessment of Streptococcus mutans viability after exposure to blue light-activated curcumin

scientific article published on 25 June 2014

Fluconazole non-susceptible breakthrough candidemia after prolonged low-dose prophylaxis: a prospective FUNGINOS study

scientific article published on 26 January 2018

French Intensive Care Society, International congress - Réanimation 2016

scientific article published in June 2016

From Genotype to Phenotype: A Clinical Perspective for Hospital-Acquired Pneumonia

scientific article published on 30 September 2017

From genotype to antibiotic susceptibility phenotype in the order Enterobacterales: a clinical perspective

scientific article published on 03 October 2019

Fulminant atypical Cryptococcus neoformans pneumonia confirmed by PLEX-ID.

scientific article published on March 2014

Functional Gut Microbiota Remodeling Contributes to the Caloric Restriction-Induced Metabolic Improvements

scientific article published on 30 August 2018

GdpS contributes to Staphylococcus aureus biofilm formation by regulation of eDNA release

scientific article

Generation of a vancomycin-intermediate Staphylococcus aureus (VISA) strain by two amino acid exchanges in VraS.

scientific article published on 6 August 2014

Genetic Adaptation of a Mevalonate Pathway Deficient Mutant in Staphylococcus aureus

scientific article published on 12 July 2018

Genome Sequence of Lactococcus lactis subsp. lactis bv. diacetylactis LD61.

scientific article published on 16 January 2014

Genome content determination in methicillin-resistant Staphylococcus aureus

scientific article published on April 2007

Genome sequence of Staphylococcus aureus Newbould 305, a strain associated with mild bovine mastitis

scientific article

Genome sequences of two Staphylococcus aureus ovine strains that induce severe (strain O11) and mild (strain O46) mastitis

scientific article

Genomic analysis of an emerging multiresistant Staphylococcus aureus strain rapidly spreading in cystic fibrosis patients revealed the presence of an antibiotic inducible bacteriophage

scientific article published on 13 January 2009

Genomic epidemiology of Neisseria meningitidis serogroup W in Switzerland between 2010 and 2016

scientific article published on 21 May 2019

Global analysis of the Staphylococcus aureus response to mupirocin

scientific article published on 21 November 2011

Ground steel target plates in combination with direct transfer of clinical Candida isolates improves frequencies of species-level identification by matrix-assisted laser desorption ionization-time of flight mass spectrometry in comparison with polis

scientific article published on 25 March 2015

HIV infection disrupts the sympatric host-pathogen relationship in human tuberculosis

scientific article

High prevalence of isolates with reduced glycopeptide susceptibility in persistent or recurrent bloodstream infections due to methicillin-resistant Staphylococcus aureus

scientific article published on 12 December 2011

High prevalence of the arginine catabolic mobile element in carriage isolates of methicillin-resistant Staphylococcus epidermidis

scientific article

High-density DNA probe arrays for identification of staphylococci to the species level.

scientific article published on 11 January 2005

High-throughput sequencing for the aetiologic identification of viral encephalitis, meningoencephalitis, and meningitis. A narrative review and clinical appraisal

scientific article published on 11 January 2019

Histone deacetylase inhibitors impair innate immune responses to Toll-like receptor agonists and to infection

scientific article published on 18 October 2010

How could rapid bacterial identification improve the management of septic patients?

scientific article published on 01 September 2011

How to use microbiological diagnostic tests in a hospital setting

scientific article published in April 2017

Human-to-bovine jump of Staphylococcus aureus CC8 is associated with the loss of a β-hemolysin converting prophage and the acquisition of a new staphylococcal cassette chromosome

scientific article

Identification by genomic and genetic analysis of two new genes playing a key role in intermediate glycopeptide resistance in Staphylococcus aureus

scientific article published on 22 December 2008

Identification of mycobacterium spp. and nocardia spp. from solid and liquid cultures by matrix-assisted laser desorption ionization-time of flight mass spectrometry (MALDI-TOF MS).

scientific article

Identification of respiratory microbiota markers in ventilator-associated pneumonia

scientific article published on 17 June 2019

Identifying Reservoirs of Infections Caused by Kingella kingae: A Case-Control Study of Oropharyngeal Carriage of K. kingae Among Healthy Adults

scientific article published on August 2016

Impact of Hypocaloric Hyperproteic Diet on Gut Microbiota in Overweight or Obese Patients with Nonalcoholic Fatty Liver Disease: A Pilot Study

scientific article published on 3 May 2016

Impact of combined low-level mupirocin and genotypic chlorhexidine resistance on persistent methicillin-resistant Staphylococcus aureus carriage after decolonization therapy: a case-control study

scientific article

Impact of fluorescein on the antimicrobial efficacy of photoactivated riboflavin in corneal collagen cross-linking

scientific article published on December 2013

Impact of oleic acid (cis-9-octadecenoic acid) on bacterial viability and biofilm production in Staphylococcus aureus

scientific article published on 27 August 2008

Imported cases of histoplasmosis

scientific article published in November 2009

Improving the quality and workflow of bacterial genome sequencing and analysis: paving the way for a Switzerland-wide molecular epidemiological surveillance platform

scientific article published on 15 December 2018

In vivo detection of clonally derived methicillin-resistant/methicillin-susceptible Staphylococcus aureus strains is not a rare event

scientific article published on 19 March 2008

Inactivation of farR Causes High Rhodomyrtone Resistance and Increased Pathogenicity in Staphylococcus aureus.

scientific article published on 28 May 2019

Inactivation of the Ecs ABC transporter of Staphylococcus aureus attenuates virulence by altering composition and function of bacterial wall

scientific article

Increased expression of clumping factor and fibronectin-binding proteins by hemB mutants of Staphylococcus aureus expressing small colony variant phenotypes

scientific article

Induction of fibronectin adhesins in quinolone-resistant Staphylococcus aureus by subinhibitory levels of ciprofloxacin or by sigma B transcription factor activity is mediated by two separate pathways

scientific article

Intensive therapy with ceftobiprole medocaril of experimental foreign-body infection by methicillin-resistant Staphylococcus aureus

scientific article

Intestinal microbiota: towards therapeutic applications

scientific article published in November 2017

Intracellular reactive oxygen species in monocytes generated by photosensitive chromophores activated with blue light

scientific article published on 19 February 2008

In vivo selection of a multidrug-resistant Aeromonas salmonicida during medicinal leech therapy.

scientific article published on 10 October 2017

Is throat screening necessary to detect methicillin-resistant Staphylococcus aureus colonization in patients upon admission to an intensive care unit?

scientific article published on 17 January 2007

Isolation and characterization of Kingella negevensis sp. nov., a novel Kingella species detected in a healthy paediatric population

scientific article

Isolation and characterization of biofilm formation-defective mutants of Staphylococcus aureus

scientific article

Kingella kingae osteoarticular infections in young children: clinical features and contribution of a new specific real-time PCR assay to the diagnosis

scientific article published on April 2010

Kingella kingae spondylodiscitis in young children: toward a new approach for bacteriological investigations? A preliminary report

scientific article

Label-free SRM-based relative quantification of antibiotic resistance mechanisms in Pseudomonas aeruginosa clinical isolates

scientific article published on 10 February 2015

Lack of biofilm contribution to bacterial colonisation in an experimental model of foreign body infection by Staphylococcus aureus and Staphylococcus epidermidis

scientific article published on 01 March 2003

Listeria monocytogenes infectious periaortitis: a case report from the infectious disease standpoint

scientific article published on 16 April 2019

Low frequency of asymptomatic carriage of toxigenic Clostridium difficile in an acute care geriatric hospital: prospective cohort study in Switzerland

scientific article published on 8 June 2016

Lower respiratory viral illnesses: improved diagnosis by molecular methods and clinical impact

scientific article published on 10 September 2004

Management and investigation of a Serratia marcescens outbreak in a neonatal unit in Switzerland - the role of hand hygiene and whole genome sequencing - R1, ARIC-D-17-00143.

scientific article

Mapping axillary microbiota responsible for body odours using a culture-independent approach

scientific article

Mapping of aetiologies of gastroenteritis: a systematic review and meta-analysis of pathogens identified using a multiplex screening array

scientific article published on 04 November 2020

Mass spectrometry methods for predicting antibiotic resistance

scientific article published on 17 June 2016

Massive Diversity in Whole-Genome Sequences of Streptococcus suis Strains from Infected Pigs in Switzerland

article

Meropenem/colistin synergy testing for multidrug-resistant Acinetobacter baumannii strains by a two-dimensional gradient technique applicable in routine microbiology

scientific article published on 19 September 2014

Messages from the first International Conference on Clinical Metagenomics (ICCMg).

scientific article

Messages from the third International Conference on Clinical Metagenomics (ICCMg3)

scientific article published on 02 March 2019

Metagenomic study of the oral microbiota by Illumina high-throughput sequencing.

scientific article published on 29 September 2009

Methicillin-resistant Staphylococcus aureus risk profiling: who are we missing?

scientific article published on 30 May 2013

Methicillin-resistant Staphylococcus aureus, Geneva, Switzerland, 1993-2005.

scientific article published on February 2008

Methicillin-resistant coagulase-negative staphylococci in the community: high homology of SCCmec IVa between Staphylococcus epidermidis and major clones of methicillin-resistant Staphylococcus aureus

scientific article published in July 2010

Methicillin-susceptible ST398 Staphylococcus aureus responsible for bloodstream infections: an emerging human-adapted subclone?

scientific article

Microarray analysis of microbiota of gingival lesions in noma patients

scientific article

Microarray comparative genomic hybridisation analysis incorporating genomic organisation, and application to enterobacterial plant pathogens

scientific article

Microbial Communities of Conducting and Respiratory Zones of Lung-Transplanted Patients

scientific article

Microbiological diagnosis of pneumonia

scientific article published on November 2014

Microbiological diagnostics of bloodstream infections in Europe-an ESGBIES survey

scientific article published on 10 April 2019

Microbiome of prebiotic-treated mice reveals novel targets involved in host response during obesity

scientific article

Microbiote, médecine de précision et microbiologie

scientific article published in November 2017

Microstructuring of polymer films for sensitive genotyping by real-time PCR on a centrifugal microfluidic platform

scientific article

Mode-of-action studies of the novel bisquaternary bisnaphthalimide MT02 against Staphylococcus aureus

scientific article

Modelling antibiotic and cytotoxic isoquinoline effects in Staphylococcus aureus, Staphylococcus epidermidis and mammalian cells

scientific article published on 27 November 2014

Modelling the impact of antibiotic use on antibiotic-resistant Escherichia coli using population-based data from a large hospital and its surrounding community.

scientific article

Modulation of fibronectin adhesins and other virulence factors in a teicoplanin-resistant derivative of methicillin-resistant Staphylococcus aureus

scientific article published on August 2004

Molecular analysis of NDM-1-producing enterobacterial isolates from Geneva, Switzerland

scientific article published on 31 May 2011

Molecular and epidemiological evaluation of strain replacement in patients previously harboring gentamicin-resistant MRSA

scientific article

Molecular basis of virulence in Staphylococcus aureus mastitis

scientific article

Molecular characterization of fluoroquinolones, macrolides, and imipenem resistance in Haemophilus influenzae: analysis of the mutations in QRDRs and assessment of the extent of the AcrAB-TolC-mediated resistance

scientific article published on 25 August 2018

Molecular diagnosis of Kingella kingae osteoarticular infections by specific real-time PCR assay

scientific article published on 01 January 2009

Molecular diagnosis of bloodstream infections: planning to (physically) reach the bedside

scientific article

Molecular identification of Fusarium species in onychomycoses

scientific article published in January 2005

Molecular-based screening for perinatal group B streptococcal infection: implications for prevention and therapy

scientific article published on December 2013

Multi-well fungal co-culture for de novo metabolite-induction in time-series studies based on untargeted metabolomics

scientific article published on July 2014

Multiple pulmonary abscesses caused by Legionella pneumophila infection in an infant with croup

scientific article published in August 2006

New approaches for functional genomic studies in staphylococci

scientific article published on 14 December 2009

New tests for the diagnosis of tuberculosis ⬇️

scientific article published on May 25, 2011

Next-Generation Sequencing for the Diagnosis of Challenging Culture-Negative Endocarditis

scientific article published on 20 September 2019

Noma affected children from Niger have distinct oral microbial communities based on high-throughput sequencing of 16S rRNA gene fragments

scientific article

Noma: an "infectious" disease of unknown aetiology

scientific article

Nonredundant mass spectrometry: a strategy to integrate mass spectrometry acquisition and analysis

scientific article published in April 2004

Nosocomial acquisition of methicillin-resistant Staphyloccocus aureus (MRSA) and extended-spectrum beta-lactamase (ESBL) Enterobacteriaceae in hospitalised patients: a prospective multicenter study.

scientific article

Nosocomial bacteraemia caused by Staphylococcus aureus

scientific article published on 01 August 2004

Novel microarray design strategy to study complex bacterial communities

scientific article

O036: Antibiotic resistance and molecular epidemiology of panton valentine leukocidin positive methicillin-resistant staphylococcus aureus (PVL+-MRSA): an international survey.

scientific article

Oropharyngeal Kingella kingae carriage in children: characteristics and correlation with osteoarticular infections.

scientific article published on 17 July 2015

Oropharyngeal colonization density of Kingella kingae.

scientific article

P053: Secular trends of methicillin-resistant Staphylococcus aureus (MRSA) at Geneva University Hospitals (HUG) over a 12-year period.

scientific article

PCR for the diagnosis of sepsis: hope or hype? ⬇️

scientific article published on January 26, 2011

Performance of the 47-kilodalton membrane protein versus DNA polymerase I genes for detection of Treponema pallidum by PCR in ulcers.

scientific article

Postoperative Gram-Negative Anaerobic Bacterial Endocarditis

scientific article published on 01 April 2007

Potential in vivo transfer of a blaCTX-M14-harbouring plasmid established by combining long- and short-read sequencing

scientific article published on 07 February 2019

Predictors of Heavy Stethoscope Contamination Following a Physical Examination

scientific article

Predictors of stethoscope contamination following a standardized physical exam.

scientific article

Prevalence and associated factors for Chlamydia trachomatis infection among undocumented immigrants in a primary care facility in Geneva, Switzerland: a cross-sectional study

scientific article published on December 2010

Prevalence and prediction of previously unknown MRSA carriage on admission to a geriatric hospital

scientific article published on 11 July 2005

Prevalence of extended-spectrum betalactamase producing–Enterobacteriaceae (ESBL-E) carriage on admission at Geneva University Hospitals (HUG).

scientific article published on 16 June 2015

Primary epiphyseal or apophyseal subacute osteomyelitis in the pediatric population: a report of fourteen cases and a systematic review of the literature

scientific article published on September 2014

Production of reactive oxygen species from photosensitizers activated with visible light sources available in dental offices

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Proteomic approach to investigate MRSA.

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Proteomic approach to investigate pathogenicity and metabolism of methicillin-resistant Staphylococcus aureus

scientific article published on January 2014

Proteomic approaches to study Staphylococcus aureus pathogenesis

scientific article published on 29 October 2009

Rapid Diagnosis of Infection in the Critically Ill, a Multicenter Study of Molecular Detection in Bloodstream Infections, Pneumonia, and Sterile Site Infections

scientific article published on 31 August 2015

Rapid Staphylococcus aureus agr type determination by a novel multiplex real-time quantitative PCR assay

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Rapid and high-throughput genotyping of Staphylococcus epidermidis isolates by automated multilocus variable-number of tandem repeats: a tool for real-time epidemiology

scientific article published on 30 January 2008

Rapid bacterial identification using evanescent-waveguide oligonucleotide microarray classification

scientific article published on 10 October 2005

Rapid clinical bacteriology and its future impact

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Rapid detection and ruling out of neonatal sepsis by PCR coupled with Electrospray Ionization Mass Spectrometry (PCR/ESI-MS).

scientific article published on 23 March 2017

Rapid detection of methicillin-resistant Staphylococcus aureus directly from sterile or nonsterile clinical samples by a new molecular assay

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Rapid diagnostic tests for infectious diseases in the emergency department

scientific article published on 29 February 2020

Rapid high resolution melting assay to differentiate Streptococcus suis serotypes 2, 1/2, 1, and 14

scientific article published on 22 January 2020

Rapid identification by MALDI-TOF/MS and antimicrobial disk diffusion susceptibility testing for positive blood cultures after a short incubation on the WASPLab

scientific article published on 21 January 2020

Rapid identification of ST131 Escherichia coli by a novel multiplex real-time allelic discrimination assay

scientific article published on 24 June 2017

Rapid molecular determination of methicillin resistance in staphylococcal bacteraemia improves early targeted antibiotic prescribing: a randomized clinical trial

scientific article published on 27 July 2016

Rapid molecular diagnosis using femA mecA real-time PCR for staphylococcal bacteraemia improves early appropriate antibiotic prescribing: a randomised clinical trial.

scientific article published on 16 June 2015

Rapid tests during respiratory infection: an aid to non-prescription of antibiotics?

scientific article published on November 2014

Rare Case of Community-Acquired Endocarditis Caused by Neisseria meningitidis Assessed by Clinical Metagenomics

scientific article published on 06 August 2019

Regulation of mprF in daptomycin-nonsusceptible Staphylococcus aureus strains

scientific article published on 16 March 2009

Relapse of Tropheryma whipplei endocarditis treated by trimethoprim/sulfamethoxazole, cured by hydroxychloroquine plus doxycycline

scientific article published on 6 November 2014

Remarkable geographical variations between India and Europe in carriage of the staphylococcal surface protein-encoding sasX/sesI and in the population structure of methicillin-resistant Staphylococcus aureus belonging to clonal complex 8

scientific article published on 02 August 2018

Repeated exposures to blue light-activated eosin Y enhance inactivation of E. faecalis biofilms, in vitro

scientific article published on 15 July 2015

Reply to Planet et al.

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Response to the letter to the editor: Comment on "Streptococcus anginosus Dental Implant-Related Osteomyelitis of the Jaws: An Insidious and Calamitous Entity"

scientific article published on 16 October 2018

Responses of gut microbiota and glucose and lipid metabolism to prebiotics in genetic obese and diet-induced leptin-resistant mice

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Rickettsia conorii transcriptional response within inoculation eschar

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Risk factors for methicillin-resistant Staphylococcus aureus surgical site infection

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Risk factors for noma disease: a 6-year, prospective, matched case-control study in Niger

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Robustness of a loop-mediated isothermal amplification reaction for diagnostic applications

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Role of the SaeRS two-component regulatory system in Staphylococcus epidermidis autolysis and biofilm formation

scientific article (publication date: 24 June 2011)

Root Microbiota in Primary and Secondary Apical Periodontitis

scientific article published in 2018

Rose bengal uptake by E. faecalis and F. nucleatum and light-mediated antibacterial activity measured by flow cytometry

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Screening for staphylococcal superantigen genes shows no correlation with the presence or the severity of chronic rhinosinusitis and nasal polyposis

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Second Periprosthetic Joint Infection Caused by Streptococcus dysgalactiae: How Genomic Sequencing Can Help Defining the Best Therapeutic Strategy

scientific article published on 21 February 2020

Small risk of osteoarticular infections in children with asymptomatic oropharyngeal carriage of Kingella kingae.

scientific article published in September 2012

Standard Genotyping Overestimates Transmission of Mycobacterium tuberculosis among Immigrants in a Low-Incidence Country

scientific article published on 18 May 2016

Staphylococcus aureus seroproteomes discriminate ruminant isolates causing mild or severe mastitis

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Staphylococcus aureus, phagocyte NADPH oxidase and chronic granulomatous disease

scientific article published on 12 December 2016

Staphylococcus aureus: the innocent culprit?

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Streptococcus sinensis endocarditis outside Hong Kong.

scientific article published in August 2007

Study of inter- and intra-individual variations in the salivary microbiota

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Symposium report: One Health meets sequencing

scientific article published on 08 August 2019

Targeting the Gut Microbiota to Treat Cachexia

scientific article published on 12 September 2019

Temporal effects of antibiotic use and hand rub consumption on the incidence of MRSA and Clostridium difficile

scientific article published on 8 May 2008

The CodY pleiotropic repressor controls virulence in gram-positive pathogens.

scientific article published on 27 May 2011

The CshA DEAD-box RNA helicase is important for quorum sensing control in Staphylococcus aureus

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The Swiss Society of Microbiology: Small Bugs, Big Questions and Cool Answers

scientific article published on December 2016

The TIR Homologue Lies near Resistance Genes in Staphylococcus aureus, Coupling Modulation of Virulence and Antimicrobial Susceptibility ⬇️

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The intestinal microbiota predisposes to traveler's diarrhea and to the carriage of multidrug-resistant Enterobacteriaceae after traveling to tropical regions

scientific article published on 03 February 2019

The stringent response of Staphylococcus aureus and its impact on survival after phagocytosis through the induction of intracellular PSMs expression.

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The σB-dependent yabJ-spoVG operon is involved in the regulation of extracellular nuclease, lipase, and protease expression in Staphylococcus aureus

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Tissue homing and persistence of defined antigen-specific CD8+ tumor-reactive T-cell clones in long-term melanoma survivors

scientific article published on 12 October 2006

Tn125-related acquisition of blaNDM-like genes in Acinetobacter baumannii

scientific article published on 5 December 2011

Tracking methicillin-resistant Staphylococcus aureus clones in Colombian hospitals over 7 years (1996-2003): emergence of a new dominant clone

scientific article published on 8 November 2005

Transcriptional Modulation of Penicillin-Binding Protein 1b, Outer Membrane Protein P2 and Efflux Pump (AcrAB-TolC) during Heat Stress Is Correlated to Enhanced Bactericidal Action of Imipenem on Non-typeable Haemophilus influenzae

scientific article published in January 2017

Transcriptome analysis of the responses of Staphylococcus aureus to antimicrobial peptides and characterization of the roles of vraDE and vraSR in antimicrobial resistance

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Transcriptomic and functional analysis of an autolysis-deficient, teicoplanin-resistant derivative of methicillin-resistant Staphylococcus aureus

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Transparent semipermeable dressings for peripherally inserted central catheters in neonates – should we be concerned?

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Trends in the treatment of orthopaedic prosthetic infections

scientific article published on 19 December 2003

Tuberculosis in HIV-Negative and HIV-Infected Patients in a Low-Incidence Country: Clinical Characteristics and Treatment Outcomes ⬇️

scientific article published on March 30, 2012

Unexpected persistence of extended-spectrum β-lactamase-producing Enterobacteriaceae in the faecal microbiota of hospitalised patients treated with imipenem

scientific article published on 9 May 2017

Universal screening for methicillin-resistant Staphylococcus aureus at hospital admission and nosocomial infection in surgical patients

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Use of PCR coupled with electrospray ionization mass spectrometry for rapid identification of bacterial and yeast bloodstream pathogens from blood culture bottles

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Use of Treponema pallidum PCR in testing of ulcers for diagnosis of primary syphilis

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Use of an automated multiple-locus, variable-number tandem repeat-based method for rapid and high-throughput genotyping of Staphylococcus aureus isolates

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Use of diagnostic microarrays for determination of virulence gene patterns of Escherichia coli K1, a major cause of neonatal meningitis

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Use of oligoarrays for characterization of community-onset methicillin-resistant Staphylococcus aureus

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Variable-number tandem repeat analysis and multilocus sequence typing data confirm the epidemiological changes observed with Staphylococcus aureus strains isolated from bloodstream infections

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When Bacterial Culture Fails, Metagenomics Can Help: A Case of Chronic Hepatic Brucelloma Assessed by Next-Generation Sequencing.

scientific article published on 17 July 2018

Which benefits for the clinician to implement MALDI-TOF/MS in the bacteriology laboratory?

scientific article published on November 2014

Whole-Genome Sequences of Streptococcus tigurinus Type Strain AZ_3a and S. tigurinus 1366, a Strain Causing Prosthetic Joint Infection

scientific article published on March 2013

Xpert(®) MTB/RIF assay sensitivity with different methods of CSF processing for the diagnosis of TB meningitis

scientific article published on 01 December 2015

[Diphtheria: new clinical presentations of an old disease]

scientific article published on 01 April 2019

[Fecal microbiota transplantation : current status and prospects]

scientific article published on 01 May 2019

[Meningococcal infections in Switzerland : changes in epidemiology, clinical manifestations and prophylaxis]

[Microbiota and malnutrition: an overview]

scientific article published in June 2018

[Severe osteoarticular infections with Staphylococcus aureus producer of Panton-Valentine Leukocidine in children]

[The new face of diagnostic microbiology]

scientific article published on 01 November 2014

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