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List of works by Rama Balakrishnan

A gene ontology inferred from molecular networks

scientific article published on January 2013

A guide to best practices for Gene Ontology (GO) manual annotation.

scientific article published on 09 July 2013

Active Interaction Mapping Reveals the Hierarchical Organization of Autophagy

scientific article published on 23 January 2017

Cross-organism analysis using InterMine

scientific article

CvManGO, a method for leveraging computational predictions to improve literature-based Gene Ontology annotations.

scientific article published on 20 March 2012

Erratum: CORRIGENDUM: InterMOD: integrated data and tools for the unification of model organism research

scientific article published in Scientific Reports

Expanded protein information at SGD: new pages and proteome browser.

scientific article

Fungal BLAST and Model Organism BLASTP Best Hits: new comparison resources at the Saccharomyces Genome Database (SGD)

scientific article

Gene Ontology annotation of sequence-specific DNA binding transcription factors: setting the stage for a large-scale curation effort

scientific article published on 27 August 2013

Gene Ontology annotations and resources

scientific article

Gene Ontology annotations at SGD: new data sources and annotation methods

scientific article

Genome Snapshot: a new resource at the Saccharomyces Genome Database (SGD) presenting an overview of the Saccharomyces cerevisiae genome

scientific article

Guidelines for the functional annotation of microRNAs using the Gene Ontology.

scientific article published on 25 February 2016

Integration of new alternative reference strain genome sequences into the Saccharomyces genome database.

scientific article published on June 2016

InterMOD: integrated data and tools for the unification of model organism research

scientific article (publication date: 2013)

Ontology mapping for semantically enabled applications

scientific article published on 31 May 2019

Saccharomyces Genome Database

scientific article published in January 2002

Saccharomyces Genome Database (SGD) provides biochemical and structural information for budding yeast proteins

scientific article published on January 2003

Saccharomyces Genome Database (SGD) provides tools to identify and analyze sequences from Saccharomyces cerevisiae and related sequences from other organisms

scientific article (publication date: 2004)

Saccharomyces Genome Database provides mutant phenotype data.

scientific article

Saccharomyces genome database: underlying principles and organisation

scientific article

Standardized description of scientific evidence using the Evidence Ontology (ECO)

scientific article

The Gene Ontology (GO) database and informatics resource

scientific article (publication date: 2004)

The Saccharomyces Genome Database Variant Viewer

scientific article

The reference genome sequence of Saccharomyces cerevisiae: then and now.

scientific article published on 20 March 2014

Using computational predictions to improve literature-based Gene Ontology annotations: a feasibility study

scientific article

YeastMine--an integrated data warehouse for Saccharomyces cerevisiae data as a multipurpose tool-kit.

scientific article

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