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List of works by Marina N Nikiforova

A Multiplexed Amplicon Approach for Detecting Gene Fusions by Next-Generation Sequencing

scientific article published on 30 December 2015

A clinical algorithm for fine-needle aspiration molecular testing effectively guides the appropriate extent of initial thyroidectomy

scientific article published in July 2014

Analytical performance of the ThyroSeq v3 genomic classifier for cancer diagnosis in thyroid nodules.

scientific article published on 18 January 2018

Authors' Reply.

scientific article published in January 2018

BRAF V600E Mutation Independently Predicts Central Compartment Lymph Node Metastasis in Patients with Papillary Thyroid Cancer ⬇️

scientific article published on September 1, 2012

BRAF mutation detection in indeterminate thyroid cytology specimens: underlying cytologic, molecular, and pathologic characteristics of papillary thyroid carcinoma.

scientific article

BRAF mutations in thyroid tumors are restricted to papillary carcinomas and anaplastic or poorly differentiated carcinomas arising from papillary carcinomas

scientific article

Benign call rate and molecular test result distribution of ThyroSeq v3

scientific article published on 18 December 2018

Both BRAF V600E Mutation and Older Age (≥65 Years) are Associated with Recurrent Papillary Thyroid Cancer ⬇️

scientific article published on May 19, 2011

Cancer risk and clinicopathological characteristics of thyroid nodules harboring thyroid-stimulating hormone receptor gene mutations

scientific article published on 8 March 2018

Characterization of Activating Mutations of the MEK1 Gene in Papillary Thyroid Carcinomas

scientific article published on 01 September 2019

Characterization of thyroid cancer driven by known and novel ALK fusions

scientific article published on 01 November 2019

Characterizing Molecular Variants and Clinical Utilization of Next-generation Sequencing in Advanced Breast Cancer.

scientific article published on 09 February 2016

Clinical Implementation and Validation of Automated Human Genome Variation Society (HGVS) Nomenclature System for Next-Generation Sequencing-Based Assays for Cancer

scientific article published on 21 June 2018

Clinical Utility of GlioSeq Next-Generation Sequencing Test in Pediatric and Young Adult Patients With Brain Tumors

scientific article published on 10 June 2019

Clinical and Morphologic Features of ETV6-NTRK3 Translocated Papillary Thyroid Carcinoma in an Adult Population Without Radiation Exposure.

scientific article published on 25 January 2017

Comprehensive MicroRNA expression profiling identifies novel markers in follicular variant of papillary thyroid carcinoma.

scientific article published on 19 September 2013

Consistency and reproducibility of next-generation sequencing and other multigene mutational assays: A worldwide ring trial study on quantitative cytological molecular reference specimens.

scientific article published on 5 May 2017

Consistency and reproducibility of next-generation sequencing in cytopathology: A second worldwide ring trial study on improved cytological molecular reference specimens

scientific article published on 25 April 2019

Contribution of molecular testing to thyroid fine-needle aspiration cytology of “follicular lesion of undetermined significance/atypia of undetermined significance”

scientific article published on 01 February 2010

Cost Impact of Molecular Testing for Indeterminate Thyroid Nodule Fine-Needle Aspiration Biopsies ⬇️

scientific article published on March 14, 2012

Cytomorphological and molecular genetic findings in pediatric thyroid fine‐needle aspiration ⬇️

scientific article published on May 17, 2012

Designing and Implementing NGS Tests for Inherited Disorders: A Practical Framework with Step-by-Step Guidance for Clinical Laboratories

scientific article published on 31 December 2018

Detection of IDH1 and IDH2 mutations by fluorescence melting curve analysis as a diagnostic tool for brain biopsies

scientific article published on 29 April 2010

Detection of SYT-SSX rearrangements in synovial sarcomas by real-time one-step RT-PCR

scientific article published on 08 March 2005

Diagnostic Utility of Isolated Tube C Positivity in T-Cell Receptor β Testing Using BIOMED-2 Primers

scientific article published on 01 March 2019

ETV6-NTRK3 is a common chromosomal rearrangement in radiation-associated thyroid cancer

scientific article published on 10 December 2013

Establishment of a non-tumorigenic papillary thyroid cell line (FB-2) carrying the RET/PTC1 rearrangement

scientific article published on February 2002

GLIS Rearrangement is a Genomic Hallmark of Hyalinizing Trabecular Tumor of the Thyroid Gland

scientific article published on 01 February 2019

GLIS rearrangements in thyroid nodules: A key to preoperative diagnosis of hyalinizing trabecular tumor

scientific article published on 02 August 2019

Gene position within chromosome territories correlates with their involvement in distinct rearrangement types in thyroid cancer cells

scientific article published on March 2009

High prevalence of BRAF mutations in thyroid cancer: genetic evidence for constitutive activation of the RET/PTC-RAS-BRAF signaling pathway in papillary thyroid carcinoma

scientific article published in April 2003

Highly accurate diagnosis of cancer in thyroid nodules with follicular neoplasm/suspicious for a follicular neoplasm cytology by ThyroSeq v2 next-generation sequencing assay.

scientific article

Histopathologic and Clinical Characterization of Thyroid Tumors Carrying the BRAF(K601E) Mutation.

scientific article published on 30 September 2015

Homologous chromosomes make contact at the sites of double-strand breaks in genes in somatic G 0 /G 1 -phase human cells ⬇️

scientific article published on May 29, 2012

Identification of the transforming STRN-ALK fusion as a potential therapeutic target in the aggressive forms of thyroid cancer

scientific article published on 03 February 2014

Impact of mutational testing on the diagnosis and management of patients with cytologically indeterminate thyroid nodules: a prospective analysis of 1056 FNA samples

scientific article

Impact of the Multi-Gene ThyroSeq Next-Generation Sequencing Assay on Cancer Diagnosis in Thyroid Nodules with Atypia of Undetermined Significance/Follicular Lesion of Undetermined Significance Cytology

scientific article

Incidental Diagnosis of Parathyroid Lesions by Preoperative Use of Next-Generation Molecular Testing.

scientific article published on 22 February 2018

Integrating next-generation sequencing to endoscopic retrograde cholangiopancreatography (ERCP)-obtained biliary specimens improves the detection and management of patients with malignant bile duct strictures

scientific article published on 10 April 2019

Investigation of the Relationship Between Radiation Dose and Gene Mutations and Fusions in Post-Chernobyl Thyroid Cancer

scientific article published on 18 November 2017

Isozyme-specific abnormalities of PKC in thyroid cancer: evidence for post-transcriptional changes in PKC epsilon

scientific article

Limitations of Detecting Genetic Variants from the RNA-Seq Data in Tissue and FNA Samples

scientific article published on 18 September 2020

Loss of Chromatin Remodeling Proteins and/or CDKN2A Associates With Metastasis of Pancreatic Neuroendocrine Tumors and Reduced Patient Survival Times.

scientific article published on 24 February 2018

Loss of heterozygosity of selected tumor suppressor genes in parathyroid carcinoma

article

Low prevalence of BRAF mutations in radiation-induced thyroid tumors in contrast to sporadic papillary carcinomas.

scientific article

Low-level BCR-ABL1 transcripts in individuals without overt hematologic malignancy

scientific article published on 22 April 2019

MiRNAs Are Involved in Tall Cell Morphology in Papillary Thyroid Carcinoma

scientific article published on 25 June 2019

MicroRNA Dysregulation in Human Thyroid Cells Following Exposure to Ionizing Radiation ⬇️

scientific article published on February 16, 2011

MicroRNA Expression Array Identifies Novel Diagnostic Markers for Conventional and Oncocytic Follicular Thyroid Carcinomas ⬇️

scientific article published on November 12, 2012

MicroRNA Signature Distinguishes the Degree of Aggressiveness of Papillary Thyroid Carcinoma ⬇️

scientific article published on May 3, 2011

MicroRNA expression profiles in thyroid tumors.

scientific article published on January 2009

MicroRNA expression profiling of thyroid tumors: biological significance and diagnostic utility

scientific article

MicroRNA profile of poorly differentiated thyroid carcinomas: new diagnostic and prognostic insights

scientific article

Mismatch repair deficiency is an uncommon mechanism of alkylator resistance in pediatric malignant gliomas: a report from the Children's Oncology Group

scientific article

Molecular Characterization of Sporadic Pediatric Thyroid Carcinoma with the DNA/RNA ThyroSeq v2 Next-Generation Sequencing Assay.

scientific article published on 14 September 2015

Molecular and histopathologic characteristics of multifocal papillary thyroid carcinoma

scientific article published in October 2013

Molecular diagnostics and predictors in thyroid cancer

scientific article published on December 2009

Molecular genetics and diagnosis of thyroid cancer

scientific article published on 30 August 2011

Molecular genetics of thyroid cancer: implications for diagnosis, treatment and prognosis

scientific article published on January 2008

Molecular profile and clinical-pathologic features of the follicular variant of papillary thyroid carcinoma. An unusually high prevalence of ras mutations

scientific article

Molecular testing for mutations in improving the fine-needle aspiration diagnosis of thyroid nodules

scientific article published on 24 March 2009

Mutations of TSHR and TP53 Genes in an Aggressive Clear Cell Follicular Carcinoma of the Thyroid

scientific article published on 11 August 2015

NTRK fusion oncogenes in pediatric papillary thyroid carcinoma in northeast United States.

scientific article

New Strategies in Diagnosing Cancer in Thyroid Nodules: Impact of Molecular Markers ⬇️

scientific article published on February 19, 2013

Next-Generation Sequencing Informatics: Challenges and Strategies for Implementation in a Clinical Environment

scientific article published on 22 February 2016

Next-generation sequencing-based molecular characterization of primary urinary bladder adenocarcinoma

scientific article

Nodule size is an independent predictor of malignancy in mutation-negative nodules with follicular lesion of undetermined significance cytology

scientific article published on 01 October 2013

Nomenclature Revision for Encapsulated Follicular Variant of Papillary Thyroid Carcinoma: A Paradigm Shift to Reduce Overtreatment of Indolent Tumors

scientific article

Oncogenic AKAP9-BRAF fusion is a novel mechanism of MAPK pathway activation in thyroid cancer

scientific article

Optimizing surgical treatment of papillary thyroid carcinoma associated with BRAF mutation.

scientific article

PAX8-PPARgamma rearrangement in thyroid tumors: RT-PCR and immunohistochemical analyses

scientific article published on 01 August 2002

PAX8/PPARγ rearrangement in thyroid nodules predicts follicular-pattern carcinomas, in particular the encapsulated follicular variant of papillary carcinoma

scientific article

Performance of a Multigene Genomic Classifier in Thyroid Nodules With Indeterminate Cytology: A Prospective Blinded Multicenter Study

scientific article published on 01 February 2019

Preoperative detection of RAS mutation may guide extent of thyroidectomy.

scientific article published on 15 November 2016

Preoperative next-generation sequencing of pancreatic cyst fluid is highly accurate in cyst classification and detection of advanced neoplasia

scientific article published on 28 September 2017

Prevalence and phenotypic correlations of EIF1AX mutations in thyroid nodules

scientific article published on 24 February 2016

Prevalence of RET/PTC rearrangements in Hashimoto's thyroiditis and papillary thyroid carcinomas

scientific article published on 01 January 2002

Prevalence of RET/PTC rearrangements in thyroid papillary carcinomas: effects of the detection methods and genetic heterogeneity.

scientific article

Pulmonary Langerhans cell histiocytosis: profiling of multifocal tumors using next-generation sequencing identifies concordant occurrence of BRAF V600E mutations

scientific article

RAS mutations in thyroid FNA specimens are highly predictive of predominantly low-risk follicular-pattern cancers

scientific article

RAS point mutations and PAX8-PPAR gamma rearrangement in thyroid tumors: evidence for distinct molecular pathways in thyroid follicular carcinoma.

scientific article

Recurrent Rearrangements in PRKACA and PRKACB in Intraductal Oncocytic Papillary Neoplasms of the Pancreas and Bile Duct

scientific article published on 31 October 2019

Regulation of p27Kip1 protein levels contributes to mitogenic effects of the RET/PTC kinase in thyroid carcinoma cells.

scientific article published on June 2004

SeqReporter: automating next-generation sequencing result interpretation and reporting workflow in a clinical laboratory

scientific article

Significance of what is not sampled: Characteristics of thyroid nonmicrocarcinomas (>1.0 cm) that were not targeted

scientific article published on 4 August 2015

Small Bowel Adenocarcinoma Frequently Exhibits Lynch Syndrome-associated Mismatch Repair Protein Deficiency But Does Not Harbor Sporadic MLH1 Deficiency

scientific article published on 2 June 2016

Spectrum of TERT promoter mutations and mechanisms of activation in thyroid cancer

scientific article published on 13 August 2019

THADA fusion is a mechanism of IGF2BP3 activation and IGF1R signaling in thyroid cancer

scientific article published on 13 February 2017

Targeted Next-Generation Sequencing Analysis of a Pendred Syndrome-Associated Thyroid Carcinoma

scientific article published on 7 January 2016

Targeted mutation detection in breast cancer using MammaSeq™

scientific article published on 08 February 2019

Targeted next-generation sequencing panel (GlioSeq) provides comprehensive genetic profiling of central nervous system tumors

scientific article published on 17 December 2015

Targeted next-generation sequencing panel (ThyroSeq) for detection of mutations in thyroid cancer

scientific article published on 26 August 2013

Targeted next-generation sequencing supports epidermoid metaplasia of the esophagus as a precursor to esophageal squamous neoplasia

scientific article published on 21 July 2017

The clinical importance of parathyroid atypia: is long-term surveillance necessary?

scientific article published on 22 July 2015

Thyroid cytology smear slides: An untapped resource for ThyroSeq testing

scientific article published on 22 July 2020

Thyroid nodules with KRAS mutations are different from nodules with NRAS and HRAS mutations with regard to cytopathologic and histopathologic outcome characteristics

scientific article published on 12 August 2014

Thyroid sclerosing mucoepidermoid carcinoma with eosinophilia: a clinicopathologic and molecular analysis of a distinct entity

scientific article

Tumor genotype determines phenotype and disease-related outcomes in thyroid cancer: a study of 1510 patients.

scientific article published on September 2015

Tumor-to-tumor metastases to follicular variant of papillary thyroid carcinoma: histologic, immunohistochemical, and molecular studies of two unusual cases

scientific article published on January 2009

Update on Molecular Testing for Cytologically Indeterminate Thyroid Nodules.

scientific article published on 16 January 2018

“Colloid‐Rich” follicular neoplasm/suspicious for follicular neoplasm thyroid fine‐needle aspiration specimens: Cytologic, histologic, and molecular basis for considering an alternate view ⬇️

scientific article published on July 23, 2013

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