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List of works by Jan-Jakob Sonke

3D surface imaging for monitoring intrafraction motion in frameless stereotactic body radiotherapy of lung cancer ⬇️

scientific article published on September 28, 2012

4D CT amplitude binning for the generation of a time-averaged 3D mid-position CT scan

scientific article published on 29 August 2014

A 1.5 T transverse magnetic field in radiotherapy of rectal cancer: Impact on the dose distribution.

scientific article published in December 2015

A Self-Sorting Coronal 4D-MRI Method for Daily Image Guidance of Liver Lesions on an MR-LINAC

scientific article published on 19 May 2018

A back-projection algorithm in the presence of an extra attenuating medium: towards EPID dosimetry for the MR-Linac.

scientific article

A multivariable study of deformable image registration evaluation metrics in 4DCT of thoracic cancer patients

scientific article published on 23 November 2020

A population based statistical model for daily geometric variations in the thorax.

scientific article published on 17 March 2017

A predictive model for residual disease after (chemo) radiotherapy in oropharyngeal carcinoma: Combined radiological and clinical evaluation of tumor response.

scientific article

A secondary analysis of FDG spatio-temporal consistency in the randomized phase II PET-boost trial in stage II-III NSCLC

scientific article published on 27 April 2018

A simulation framework for modeling tumor control probability in breast conserving therapy

scientific article published on 17 April 2014

Adaptive Radiotherapy for Anatomical Changes

scientific article published on 01 July 2019

Adverse event development in clinical oncology trials

Alpha/beta ratio for normal lung tissue as estimated from lung cancer patients treated with stereotactic body and conventionally fractionated radiation therapy

scientific article published on 01 January 2014

An MRI-based mid-ventilation approach for radiotherapy of the liver

scientific article published on 5 November 2016

Analysis of GTV reduction during radiotherapy for oropharyngeal cancer: Implications for adaptive radiotherapy.

scientific article published on 18 November 2016

Assessment of set-up variability during deep inspiration breath hold radiotherapy for breast cancer patients by 3D-surface imaging ⬇️

scientific article published on February 12, 2013

Automatic detection system for multiple region of interest registration to account for posture changes in head and neck radiotherapy

scientific article

Automatic prostate localization on cone-beam CT scans for high precision image-guided radiotherapy

scientific article published on November 2005

Baseline peripheral blood leukocytosis: Biological marker predicts outcome in oropharyngeal cancer, regardless of HPV-status.

scientific article published on 20 February 2018

Beyond the margin recipe: the probability of correct target dosage and tumor control in the presence of a dose limiting structure

scientific article published on 23 August 2017

Clinical evaluation of respiration-induced attenuation uncertainties in pulmonary 3D PET/CT.

scientific article

Clinical introduction of image lag correction for a cone beam CT system.

scientific article

Comparing position and orientation accuracy of different electromagnetic sensors for tracking during interventions.

scientific article published on 25 January 2016

Correcting geometric image distortions in slice-based 4D-MRI on the MR-linac

scientific article published on 07 June 2019

Deformable image registration for adaptive radiation therapy of head and neck cancer: accuracy and precision in the presence of tumor changes.

scientific article published on 20 August 2014

Differences between planned and delivered dose for head and neck cancer, and their consequences for normal tissue complication probability and treatment adaptation

scientific article published on 17 August 2019

Differential analysis of local and regional failure in locally advanced non-small cell lung cancer patients treated with concurrent chemoradiotherapy.

scientific article published on 15 February 2016

Directional Interpolation for Motion Weighted 4D Cone-Beam CT Reconstruction ⬇️

scientific article published on 01 January 2012

Directional sinogram interpolation for motion weighted 4D cone-beam CT reconstruction.

scientific article published on 31 January 2017

Dose-effect analysis of radiation induced rib fractures after thoracic SBRT.

scientific article published on 19 January 2017

Dynamic collimator angle adjustments during volumetric modulated arc therapy to account for prostate rotations

scientific article published on 22 January 2015

Effect of compressed sensing reconstruction on target and organ delineation in cone-beam CT of head-and-neck and breast cancer patients

scientific article published on 04 August 2014

Effects of anatomical changes on pencil beam scanning proton plans in locally advanced NSCLC patients

scientific article published on 5 July 2016

Estimation of the α/β ratio of non-small cell lung cancer treated with stereotactic body radiotherapy

scientific article published on 17 August 2019

Feasibility of Micro-Computed Tomography Imaging for Direct Assessment of Surgical Resection Margins During Breast-Conserving Surgery

scientific article published on 23 April 2019

Feasibility of cone beam CT-guided library of plans strategy in pre-operative gastric cancer radiotherapy

scientific article published on 05 May 2020

Fractures of thoracic vertebrae in patients with locally advanced non-small cell lung carcinoma treated with intensity modulated radiotherapy

scientific article published on 16 January 2016

Head and Neck Margin Reduction With Adaptive Radiation Therapy: Robustness of Treatment Plans Against Anatomy Changes.

scientific article published on 21 July 2016

Heart dose associated with overall survival in locally advanced NSCLC patients treated with hypofractionated chemoradiotherapy.

scientific article published on 19 September 2017

Image-Guided Radiotherapy for Breast Cancer Patients: Surgical Clips as Surrogate for Breast Excision Cavity ⬇️

scientific article published on February 23, 2011

Impact of negative margin width on local recurrence in breast conserving therapy ⬇️

scientific article published on July 26, 2012

Impact of setup and range uncertainties on TCP and NTCP following VMAT or IMPT of oropharyngeal cancer patients

scientific article published on 23 April 2019

Improved image quality of cone beam CT scans for radiotherapy image guidance using fiber-interspaced antiscatter grid

scientific article published in June 2014

Intra thoracic anatomical changes in lung cancer patients during the course of radiotherapy

scientific article published on 6 November 2014

Intrafraction Motion in Stereotactic Body Radiation Therapy for Non-Small Cell Lung Cancer: Intensity Modulated Radiation Therapy Versus Volumetric Modulated Arc Therapy.

scientific article published on 9 February 2016

Investigating the impact of patient arm position in an MR-linac on liver SBRT treatment plans

scientific article published on 04 October 2019

LDeform: Longitudinal deformation analysis for adaptive radiotherapy of lung cancer

scientific article published on 26 November 2019

Late follow-up of the randomized radiation and concomitant high-dose intra-arterial or intravenous cisplatin (RADPLAT) trial for advanced head and neck cancer

scientific article published on 06 July 2015

Leaf trajectory verification during dynamic intensity modulated radiotherapy using an amorphous silicon flat panel imager

scientific article published in February 2004

Local and regional treatment response by 18FDG-PET-CT-scans 4 weeks after concurrent hypofractionated chemoradiotherapy in locally advanced NSCLC

scientific article published on 22 November 2019

Local dose–effect relations for lung perfusion post stereotactic body radiotherapy ⬇️

scientific article published on April 23, 2013

Lungtech, a phase II EORTC trial of SBRT for centrally located lung tumours - a clinical physics perspective

scientific article

MRI-guided mid-position liver radiotherapy: Validation of image processing and registration steps

scientific article published on 25 June 2019

Magnetic resonance-guided adaptive radiotherapy: a solution to the future

scientific article

Mapping of sentinel lymph node drainage using SPECT/CT to tailor elective nodal irradiation in head and neck cancer patients (SUSPECT-2): a single-center prospective trial

scientific article published on 14 November 2019

Margin and PTV volume reduction using a population based library of plans strategy for rectal cancer radiotherapy

scientific article published on 14 September 2018

Mediastinal lymph node position variability in non-small cell lung cancer patients treated with radical irradiation ⬇️

scientific article published on October 22, 2012

Micro cone beam computed tomography for sensitive assessment of radiation-induced late lung toxicity in preclinical models

scientific article published on 27 May 2019

Microscopic disease extensions as a risk factor for loco-regional recurrence of NSCLC after SBRT.

scientific article published on 4 October 2013

Mid-ventilation based PTV margins in Stereotactic Body Radiotherapy (SBRT): a clinical evaluation

scientific article published on 20 February 2014

Mitigating differential baseline shifts in locally advanced lung cancer patients using an average anatomy model

scientific article published on 11 April 2017

Modeling radiation pneumonitis of pulmonary stereotactic body radiotherapy: The impact of a local dose-effect relationship for lung perfusion loss

scientific article published on 09 January 2019

Modeling the Cellular Response of Lung Cancer to Radiation Therapy for a Broad Range of Fractionation Schedules

scientific article

Motion compensated digital tomosynthesis

scientific article published on 3 October 2013

Multi-institutional dosimetric and geometric commissioning of image-guided small animal irradiators

scientific article published in March 2014

Multiple training interventions significantly improve reproducibility of PET/CT-based lung cancer radiotherapy target volume delineation using an IAEA study protocol

scientific article published on 20 September 2016

Optimal combination of anti-scatter grids and software correction for CBCT imaging.

scientific article published on 29 May 2017

Organ Function Preservation Failure after (Chemo)Radiotherapy in Head and Neck Cancer: A Retrospective Cohort Analysis

scientific article published on 07 May 2019

PET motion compensation for radiation therapy using a CT-based mid-position motion model: methodology and clinical evaluation.

scientific article

Pre-hydration in cisplatin-based CCRT: Effects on tumour concentrations and treatment outcome

scientific article published on 31 January 2019

Prediction of Early Death in Patients with Early-Stage NSCLC-Can We Select Patients without a Potential Benefit of SBRT as a Curative Treatment Approach?

scientific article

Predictive Models to Determine Clinically Relevant Deviations in Delivered Dose for Head and Neck Cancer

scientific article published on 02 March 2019

Prognostic parameters for acute esophagus toxicity in intensity modulated radiotherapy and concurrent chemotherapy for locally advanced non-small cell lung cancer.

scientific article published on 3 May 2013

Radiation-Induced Lung Density Changes on CT Scan for NSCLC: No Impact of Dose-Escalation Level or Volume

scientific article published on 02 July 2018

Radiotherapy quality assurance of SBRT for patients with centrally located lung tumours within the multicentre phase II EORTC Lungtech trial: Benchmark case results

scientific article published on 21 December 2018

Real-time wireless tumor tracking during breast conserving surgery.

scientific article

Recurrent inference machines for reconstructing heterogeneous MRI data

scientific article published on 18 January 2019

Recurrent oropharyngeal cancer after organ preserving treatment: pattern of failure and survival.

scientific article

Reducing 4DCBCT imaging time and dose: the first implementation of variable gantry speed 4DCBCT on a linear accelerator.

scientific article published on 5 May 2017

Registration accuracy and image quality of time averaged mid-position CT scans for liver SBRT.

scientific article published on 3 October 2013

Residual Seminal Vesicle Displacement in Marker-Based Image-Guided Radiotherapy for Prostate Cancer and the Impact on Margin Design

scientific article published in June 2011

Results of a multicentre dosimetry audit using a respiratory phantom within the EORTC LungTech trial

scientific article published on 25 June 2019

Retrospective self-sorted 4D-MRI for the liver

scientific article published on 24 May 2018

SBRT combined with concurrent chemoradiation in stage III NSCLC: Feasibility study of the phase I Hybrid trial

scientific article published on 17 August 2019

SPECT/CT-guided elective nodal irradiation for head and neck cancer: Estimation of clinical benefits using NTCP models

scientific article published on 04 August 2018

Safety and efficacy of reduced dose and margins to involved lymph node metastases in locally advanced NSCLC patients

scientific article published on 17 August 2019

Subgroup Survival Analysis in Stage I-II NSCLC Patients With a Central Tumor Partly Treated With Risk-Adapted SBRT

scientific article published on 31 August 2018

Supine Breast MRI Using Respiratory Triggering

scientific article published on 27 February 2017

TU-E-BRCD-01: The Emerging Role of Image-Guidance for Breast Radiotherapy

scientific article

The PET-boost randomised phase II dose-escalation trial in non-small cell lung cancer ⬇️

scientific article published on April 6, 2012

The Prognostic Value of Baseline 18F-FDG PET/CT in Human Papillomavirus-Positive Versus Human Papillomavirus-Negative Patients With Oropharyngeal Cancer

scientific article published on 01 May 2019

The acute and late toxicity results of a randomized phase II dose-escalation trial in non-small cell lung cancer (PET-boost trial)

scientific article published on 13 October 2018

The developing role of FDG PET imaging for prognostication and radiotherapy target volume delineation in non-small cell lung cancer

scientific article published on 01 August 2018

The feasibility of manual parameter tuning for deformable breast MR image registration from a multi-objective optimization perspective

scientific article published on 24 April 2017

The first implementation of respiratory triggered 4DCBCT on a linear accelerator.

scientific article published on 7 April 2016

The first-in-human implementation of adaptive 4D cone beam CT for lung cancer radiotherapy: 4DCBCT in less time with less dose

The impact of margin reduction on outcome and toxicity in head and neck cancer patients treated with image-guided volumetric modulated arc therapy (VMAT)

scientific article published on 10 July 2018

The influence of a dietary protocol on cone beam CT-guided radiotherapy for prostate cancer patients

scientific article

Treatment adherence in concurrent chemoradiation in patients with locally advanced non-small cell lung carcinoma: results of daily intravenous prehydration.

scientific article published on 17 January 2014

Tumor Trailing for Liver SBRT on the MR-Linac

scientific article published on 20 September 2018

Validating a Predictive Atlas of Tumor Shrinkage for Adaptive Radiotherapy of Locally Advanced Lung Cancer

scientific article published on 02 June 2018

Validation of automatic segmentation of ribs for NTCP modeling.

scientific article

Validation of deformable registration in head and neck cancer using analysis of variance ⬇️

scientific article published on November 1, 2012

Volume changes in soft tissue sarcomas during preoperative radiotherapy of extremities evaluated using cone-beam CT ⬇️

scientific article published on January 4, 2013

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