List of works - Mikel Hernaez

A cluster-based approach to compression of Quality Scores

scientific article published on March 2016

Aligned genomic data compression via improved modeling.

scientific article

An Evaluation Framework for Lossy Compression of Genome Sequencing Quality Values

scientific article published on March 2016

An Introduction to MPEG-G: The First Open ISO/IEC Standard for the Compression and Exchange of Genomic Sequencing Data

scientific article published in 2021

Benchmark of long non-coding RNA quantification for RNA sequencing of cancer samples

scientific article published on 01 December 2019

CALQ: compression of quality values of aligned sequencing data

scientific article published on 23 November 2017

CROMqs: an infinitesimal successive refinement lossy compressor for the quality scores

scientific article published on 01 September 2016

Cell-type specific polysome profiling from mammalian tissues

scientific article published on 27 November 2018

Comment on: 'ERGC: an efficient referential genome compression algorithm'.

scientific article published on 28 November 2015

Comparison of single and module-based methods for modeling gene regulatory networks

scientific article published on 01 January 2020

Denoising of Aligned Genomic Data

scientific article published on 21 October 2019

Denoising of Quality Scores for Boosted Inference and Reduced Storage

scientific article published in March 2016

Effect of lossy compression of quality scores on variant calling.

scientific article

FaStore - a space-saving solution for raw sequencing data.

scientific article

GABAC: an arithmetic coding solution for genomic data

scientific article published on 01 April 2020

GTRAC: fast retrieval from compressed collections of genomic variants

scientific article

GeneComp, a new reference-based compressor for SAM files.

scientific article published on April 2017

QVZ: lossy compression of quality values

scientific article

SPRING: a next-generation compressor for FASTQ data

scientific article published on 01 August 2019

Sentieon DNASeq Variant Calling Workflow Demonstrates Strong Computational Performance and Accuracy

scientific article published on 20 August 2019

SimiC enables the inference of complex gene regulatory dynamics across cell phenotypes

scientific article published in 2022

List of works by Mikel Hernaez

A cluster-based approach to compression of Quality Scores

Aligned genomic data compression via improved modeling.

An Evaluation Framework for Lossy Compression of Genome Sequencing Quality Values

An Introduction to MPEG-G: The First Open ISO/IEC Standard for the Compression and Exchange of Genomic Sequencing Data

Benchmark of long non-coding RNA quantification for RNA sequencing of cancer samples

CALQ: compression of quality values of aligned sequencing data

CROMqs: an infinitesimal successive refinement lossy compressor for the quality scores

Cell-type specific polysome profiling from mammalian tissues

Comment on: 'ERGC: an efficient referential genome compression algorithm'.

Comparison of single and module-based methods for modeling gene regulatory networks

Denoising of Aligned Genomic Data

Denoising of Quality Scores for Boosted Inference and Reduced Storage

Effect of lossy compression of quality scores on variant calling.

FaStore - a space-saving solution for raw sequencing data.

GABAC: an arithmetic coding solution for genomic data

GTRAC: fast retrieval from compressed collections of genomic variants

GeneComp, a new reference-based compressor for SAM files.

QVZ: lossy compression of quality values

SPRING: a next-generation compressor for FASTQ data

Sentieon DNASeq Variant Calling Workflow Demonstrates Strong Computational Performance and Accuracy

SimiC enables the inference of complex gene regulatory dynamics across cell phenotypes