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List of works by J Harry Caufield

A Metadata Extraction Approach for Clinical Case Reports to Enable Advanced Understanding of Biomedical Concepts

scientific article published on 20 September 2018

A Second Look at FAIR in Proteomic Investigations

scientific article published on 13 March 2021

A reference set of curated biomedical data and metadata from clinical case reports

scientific article published on 20 November 2018

Bacterial protein meta-interactomes predict cross-species interactions and protein function.

scientific article

Biolink Model: A Universal Schema for Knowledge Graphs in Clinical, Biomedical, and Translational Science ⬇️

scientific article

Cardiovascular informatics: building a bridge to data harmony

publication published on 01 February 2022

Global landscape of cell envelope protein complexes in Escherichia coli.

scientific article published on 27 November 2017

KG-Hub -- Building and Exchanging Biological Knowledge Graphs

preprint published in 2023

KG-Hub—building and exchanging biological knowledge graphs

scientific article published in 2023

Making the Right Choice: Critical Parameters of the Y2H Systems

scientific article published on 01 January 2018

Mapping protein-protein interactions using yeast two-hybrid assays

scientific article published on May 2015

OntoGPT

Python package for extracting structured information from text

Protein complexes in bacteria.

scientific article

Proteome data improves protein function prediction in the interactome of H. pylori.

scientific article published in February 2018

Specific N-terminal cleavage of ribosomal protein L27 in Staphylococcus aureus and related bacteria

scientific article published on 8 December 2014

Structured Prompt Interrogation and Recursive Extraction of Semantics (SPIRES): a method for populating knowledge bases using zero-shot learning

scientific article published on 21 February 2024

The Human Phenotype Ontology in 2024: phenotypes around the world

scientific article published in 2023

The Monarch Initiative in 2024: an analytic platform integrating phenotypes, genes and diseases across species

The Protein Interactome of Mycobacteriophage Giles Predicts Functions for Unknown Proteins

scientific article published on 18 May 2015

The yeast two-hybrid system: a tool for mapping protein-protein interactions

scientific article published on May 2015

Virus-host protein-protein interactions of mycobacteriophage Giles.

scientific article published on 28 November 2017

ZapG (YhcB/DUF1043), a novel cell division protein in gamma-proteobacteria linking the Z-ring to septal peptidoglycan synthesis

scientific article published on 01 January 2021

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