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List of works by Joe W. Gray

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Proteomic and transcriptomic profiling reveals a link between the PI3K pathway and lower estrogen-receptor (ER) levels and activity in ER+ breast cancer

scientific article
Temporal dissection of tumorigenesis in primary cancers

scientific article
Inferring causal molecular networks: empirical assessment through a community-based effort

scientific article
Rbfox proteins regulate alternative mRNA splicing through evolutionarily conserved RNA bridges.

scientific article
Metrics other than potency reveal systematic variation in responses to cancer drugs.

scientific article
High-resolution mapping of genotype-phenotype relationships in cri du chat syndrome using array comparative genomic hybridization

scientific article
CUL4A induces epithelial-mesenchymal transition and promotes cancer metastasis by regulating ZEB1 expression.

scientific article published on 04 December 2013
Enhanced NF kappa B and AP-1 transcriptional activity associated with antiestrogen resistant breast cancer

scientific article
Genome-wide Methylation Analysis Identifies Genes Specific to Breast Cancer Hormone Receptor Status and Risk of Recurrence

scientific article published on August 8, 2011
Protein elongation factor EEF1A2 is a putative oncogene in ovarian cancer

scientific article (publication date: July 2002)
A central role for RAF→MEK→ERK signaling in the genesis of pancreatic ductal adenocarcinoma.

scientific article
End-sequence profiling: sequence-based analysis of aberrant genomes

scientific article
Construction and characterization of plasmid libraries enriched in sequences from single human chromosomes

scientific article published on December 1, 1991
Cellular effect of high doses of silica-coated quantum dot profiled with high throughput gene expression analysis and high content cellomics measurements

scientific article published on April 2006
Integrating data on DNA copy number with gene expression levels and drug sensitivities in the NCI-60 cell line panel

scientific article
Quantitative Multiplex Immunohistochemistry Reveals Myeloid-Inflamed Tumor-Immune Complexity Associated with Poor Prognosis.

scientific article
Cytogenetic analysis by in situ hybridization with fluorescently labeled nucleic acid probes

scientific article published on 01 January 1986
Ras-GTP dimers activate the Mitogen-Activated Protein Kinase (MAPK) pathway

scientific article published on 16 June 2015
A human breast cell model of preinvasive to invasive transition.

scientific article published on March 2008
BRIT1 regulates early DNA damage response, chromosomal integrity, and cancer

scientific article
Exome sequencing of desmoplastic melanoma identifies recurrent NFKBIE promoter mutations and diverse activating mutations in the MAPK pathway

scientific article
Single-molecule superresolution imaging allows quantitative analysis of RAF multimer formation and signaling

scientific article published on 24 October 2013
A screen for genes that suppress loss of contact inhibition: identification of ING4 as a candidate tumor suppressor gene in human cancer

scientific article
A nanoplasmonic molecular ruler for measuring nuclease activity and DNA footprinting

scientific article published on 01 October 2006
TBX3 and its isoform TBX3+2a are functionally distinctive in inhibition of senescence and are overexpressed in a subset of breast cancer cell lines

scientific article
Amplification of MDS1/EVI1 and EVI1, located in the 3q26.2 amplicon, is associated with favorable patient prognosis in ovarian cancer

scientific article published on April 2007
Integrative analysis of cyclin protein levels identifies cyclin b1 as a classifier and predictor of outcomes in breast cancer

scientific article
The expression level of HJURP has an independent prognostic impact and predicts the sensitivity to radiotherapy in breast cancer

scientific article published on March 8, 2010
Amplification of 11q13 in ovarian carcinoma

scientific article published on 01 June 2008
Exon-level microarray analyses identify alternative splicing programs in breast cancer

scientific article
Genomic copy number analysis of non-small cell lung cancer using array comparative genomic hybridization: implications of the phosphatidylinositol 3-kinase pathway

scientific article published in July 2002
The Library of Integrated Network-Based Cellular Signatures NIH Program: System-Level Cataloging of Human Cells Response to Perturbations

scientific article published on 24 November 2017
Picomolar sensitivity MRI and photoacoustic imaging of cobalt nanoparticles

scientific article
Comparative analyses of gene copy number and mRNA expression in glioblastoma multiforme tumors and xenografts

scientific article published on 12 January 2009
Nanoparticle-mediated systemic delivery of siRNA for treatment of cancers and viral infections

scientific article
Phylogenetic analyses of melanoma reveal complex patterns of metastatic dissemination.

scientific article
Tumor-Derived Cell Lines as Molecular Models of Cancer Pharmacogenomics

scientific article
Genome amplification of chromosome 20 in breast cancer

scientific article
Exome Sequencing of Cell-Free DNA from Metastatic Cancer Patients Identifies Clinically Actionable Mutations Distinct from Primary Disease

scientific article published on 28 August 2015
Quantitative analysis of chromosomal CGH in human breast tumors associates copy number abnormalities with p53 status and patient survival

scientific article published on July 2001
Identification of PADI2 as a potential breast cancer biomarker and therapeutic target

scientific article
Molecular Predictors of 3D Morphogenesis by Breast Cancer Cell Lines in 3D Culture

scientific article published on February 26, 2010
Array-based comparative genomic hybridization analysis identified cyclin D1 as a target oncogene at 11q13.3 in nasopharyngeal carcinoma

scientific article published on September 2005
High quality copy number and genotype data from FFPE samples using Molecular Inversion Probe (MIP) microarrays

scientific article
Genome-wide array CGH analysis of murine neuroblastoma reveals distinct genomic aberrations which parallel those in human tumors.

scientific article published in September 2003
Crosstalk between Aurora-A and p53: frequent deletion or downregulation of Aurora-A in tumors from p53 null mice

scientific article published on February 2007
Bayesian inference of signaling network topology in a cancer cell line

scientific article
Genetic analysis using genomic representations

scientific article
The role of p53 in suppression of KSHV cyclin-induced lymphomagenesis

scientific article published on January 2004
Asparagine synthetase as a causal, predictive biomarker for L-asparaginase activity in ovarian cancer cells

scientific article

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