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List of works by William F Flynn

A combined treatment of hydration and dynamical effects for the modeling of host-guest binding thermodynamics: the SAMPL5 blinded challenge.

scientific article published on 30 September 2016

Asynchronous Replica Exchange Software for Grid and Heterogeneous Computing

scientific article (publication date: November 2015)

Cellular taxonomy and spatial organization of the murine ventral posterior hypothalamus

scientific article published on 29 October 2020

Coevolutionary Landscape of Kinase Family Proteins: Sequence Probabilities and Functional Motifs.

scientific article published in January 2018

Cross-Species Single-Cell Analysis of Pancreatic Ductal Adenocarcinoma Reveals Antigen-Presenting Cancer-Associated Fibroblasts

scientific article published on 13 June 2019

Identification of EOMES-expressing spermatogonial stem cells and their regulation by PLZF.

scientific article

Identification of a T follicular helper cell subset that drives anaphylactic IgE

scientific article published on 01 August 2019

Improving Prediction Accuracy of Binding Free Energies and Poses of HIV Integrase Complexes Using the Binding Energy Distribution Analysis Method with Flattening Potentials

scientific article published on 03 July 2018

Inference of Epistatic Effects Leading to Entrenchment and Drug Resistance in HIV-1 Protease.

scientific article

Large scale free energy calculations for blind predictions of protein-ligand binding: the D3R Grand Challenge 2015.

scientific article

Large-scale asynchronous and distributed multidimensional replica exchange molecular simulations and efficiency analysis

scientific article

Mapping systemic lupus erythematosus heterogeneity at the single-cell level

scientific article published on 03 August 2020

Potts Hamiltonian models of protein co-variation, free energy landscapes, and evolutionary fitness.

scientific article

Single-cell analysis of human glioma and immune cells identifies S100A4 as an immunotherapy target

scientific article published on 09 February 2022

Structural propensities of kinase family proteins from a Potts model of residue co-variation.

scientific article published on 31 May 2016

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