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List of works by Hendrik Gerard Stunnenberg

5-Hydroxymethylcytosine: a new kid on the epigenetic block?

scientific article

A SILAC-based screen for Methyl-CpG binding proteins identifies RBP-J as a DNA methylation and sequence-specific binding protein

scientific article

A TFTC/STAGA module mediates histone H2A and H2B deubiquitination, coactivates nuclear receptors, and counteracts heterochromatin silencing

scientific article

A comprehensive evaluation of rodent malaria parasite genomes and gene expression

scientific article

A facelift for the general transcription factor TFIIA

scientific article

A feed-forward repression mechanism anchors the Sin3/histone deacetylase and N-CoR/SMRT corepressors on chromatin

scientific article published on July 2006

A genome-wide chromatin-associated nuclear peroxiredoxin from the malaria parasite Plasmodium falciparum

scientific article (publication date: April 2011)

A hierarchy of H3K4me3 and H3K27me3 acquisition in spatial gene regulation in Xenopus embryos.

scientific article

A major role for the Plasmodium falciparum ApiAP2 protein PfSIP2 in chromosome end biology

scientific article (publication date: 26 February 2010)

A model for the topology of active ribosomal RNA genes

scientific article published on 18 February 2011

A polymorphic enhancer near GREM1 influences bowel cancer risk through differential CDX2 and TCF7L2 binding

scientific article published on 14 August 2014

A quantitative proteomics tool to identify DNA-protein interactions in primary cells or blood

scientific article

A somatic-mutational process recurrently duplicates germline susceptibility loci and tissue-specific super-enhancers in breast cancers

scientific article published on 23 January 2017

Age-related variations in the methylome associated with gene expression in human monocytes and T cells

scientific article

An RNA-Seq strategy to detect the complete coding and non-coding transcriptome including full-length imprinted macro ncRNAs

scientific article

An efficient method for generation of bi-allelic null mutant mouse embryonic stem cells and its application for investigating epigenetic modifiers

scientific article published on 13 September 2017

An in vitro assay to study the recruitment and substrate specificity of chromatin modifying enzymes

scientific article

An oestrogen-receptor-α-bound human chromatin interactome

scientific article (publication date: 5 November 2009)

Analysis of chromatin-nuclear receptor interactions by laser-chromatin immunoprecipitation

scientific article

Analysis of the Plasmodium falciparum proteome by high-accuracy mass spectrometry

scientific article published in October 2002

Application of active and kinase-deficient kinome collection for identification of kinases regulating hedgehog signaling

scientific article

Author Correction: Landscape of somatic mutations in 560 breast cancer whole-genome sequences

scientific article published on 01 February 2019

BCG Vaccination Protects against Experimental Viral Infection in Humans through the Induction of Cytokines Associated with Trained Immunity

scientific article published in January 2018

BLUEPRINT to decode the epigenetic signature written in blood.

scientific article

BLUEPRINT: mapping human blood cell epigenomes

scientific article (publication date: October 2013)

BRD9 binds cell type-specific chromatin regions regulating leukemic cell survival via STAT5 inhibition

scientific article published on 18 April 2019

Bacille Calmette-Guérin induces NOD2-dependent nonspecific protection from reinfection via epigenetic reprogramming of monocytes ⬇️

scientific article published on September 17, 2012

Blood monocyte transcriptome and epigenome analyses reveal loci associated with human atherosclerosis

scientific article published on 30 August 2017

Blueprint of human thymopoiesis reveals molecular mechanisms of stage-specific TCR enhancer activation

scientific article published on 01 September 2020

Brd4-independence in ground state pluripotency

scientific article published on 01 May 2018

Breast cancer genome and transcriptome integration implicates specific mutational signatures with immune cell infiltration

scientific article published on 26 September 2016

CATCHprofiles: clustering and alignment tool for ChIP profiles.

scientific article

CDK2AP1/DOC-1 is a bona fide subunit of the Mi-2/NuRD complex.

scientific article

Candida albicans infection affords protection against reinfection via functional reprogramming of monocytes.

scientific article published on August 2012

Cell type specific novel lncRNAs and circRNAs in the BLUEPRINT haematopoietic transcriptomes atlas

scientific article published on 23 July 2020

ChIP-Seq of ERalpha and RNA polymerase II defines genes differentially responding to ligands

scientific article published on 04 April 2009

ChIP-chip designs to interrogate the genome of Xenopus embryos for transcription factor binding and epigenetic regulation

scientific article

Characterization of a conserved rhoptry-associated leucine zipper-like protein in the malaria parasite Plasmodium falciparum

scientific article (publication date: March 2008)

Characterization of genome-wide p53-binding sites upon stress response.

scientific article

Characterization of lysine 56 of histone H3 as an acetylation site in Saccharomyces cerevisiae

scientific article

Chromatin accessibility, p300, and histone acetylation define PML-RARα and AML1-ETO binding sites in acute myeloid leukemia

scientific article

Chromatin activation as a unifying principle underlying pathogenic mechanisms in multiple myeloma

scientific article published on 20 August 2020

Chromatin-Based Classification of Genetically Heterogeneous AMLs into Two Distinct Subtypes with Diverse Stemness Phenotypes

scientific article published on 01 January 2019

Cleavage and proteasome-mediated degradation of the basal transcription factor TFIIA.

scientific article published on 15 July 2004

Coactivation of GR and NFKB alters the repertoire of their binding sites and target genes

scientific article

Combined HAT/EZH2 modulation leads to cancer-selective cell death.

scientific article published on 22 May 2018

Combined quantification of intracellular (phospho-)proteins and transcriptomics from fixed single cells

scientific article published in Scientific Reports

Comparative analysis of neutrophil and monocyte epigenomes

Comparative genome-wide DNA methylation analysis of colorectal tumor and matched normal tissues.

scientific article

Context-selective death of acute myeloid leukemia cells triggered by the novel hybrid retinoid-HDAC inhibitor MC2392.

scientific article published on 24 February 2014

Control of embryonic stem cell self-renewal and differentiation via coordinated alternative splicing and translation of YY2

scientific article published on 24 October 2016

Controlled Human Malaria Infection Induces Long-Term Functional Changes in Monocytes

scientific article published on 26 November 2020

Controlled assembly of macromolecular beta-sheet fibrils

scientific article

Correction to: Rewiring of glucose metabolism defines trained immunity induced by oxidized low-density lipoprotein

scientific article published on 11 June 2020

Correctly folded Pfs48/45 protein of Plasmodium falciparum elicits malaria transmission-blocking immunity in mice

scholarly article

Corrigendum: A somatic-mutational process recurrently duplicates germline susceptibility loci and tissue-specific super-enhancers in breast cancers

scientific article published in October 2017

Critical Role for P53 in Regulating the Cell Cycle of Ground State Embryonic Stem Cells

scientific article published on 30 January 2020

Crosstalk between c-Jun and TAp73alpha/beta contributes to the apoptosis-survival balance

scientific article published on 31 March 2011

DNA Methylation Dynamics of Human Hematopoietic Stem Cell Differentiation

scientific article

DNA Methylation of the Aryl Hydrocarbon Receptor Repressor Associations With Cigarette Smoking and Subclinical Atherosclerosis

scientific article

DNA methylation immediately adjacent to active histone marking does not silence transcription.

scientific article published on 3 January 2007

DNA methylome analysis in Burkitt and follicular lymphomas identifies differentially methylated regions linked to somatic mutation and transcriptional control

scientific article

De novo mutations in the genome organizer CTCF cause intellectual disability.

scientific article published on 06 June 2013

Death Receptor Pathway Activation and Increase of ROS Production by the Triple Epigenetic Inhibitor UVI5008

article

Decoding the DNA Methylome of Mantle Cell Lymphoma in the Light of the Entire B Cell Lineage.

scientific article published on November 2016

Dendritic Cells Actively Limit Interleukin-10 Production Under Inflammatory Conditions via DC-SCRIPT and Dual-Specificity Phosphatase 4.

scientific article published on 22 June 2018

Developmental biology. A Me6Age for pluripotency

scientific article published in February 2015

Digitalis-like Compounds Facilitate Non-Medullary Thyroid Cancer Redifferentiation through Intracellular Ca2+, FOS, and Autophagy-Dependent Pathways

scientific article published on 11 November 2016

Distinct Cell-Cycle Control in Two Different States of Mouse Pluripotency

scientific article

Distinct Trends of DNA Methylation Patterning in the Innate and Adaptive Immune Systems

scientific article published in November 2016

Dnmt3L antagonizes DNA methylation at bivalent promoters and favors DNA methylation at gene bodies in ESCs

scientific article

Dual promoter usage as regulatory mechanism of let-7c expression in leukemic and solid tumors.

scientific article published on 17 March 2014

Dynamic CpG methylation delineates subregions within super-enhancers selectively decommissioned at the exit from naive pluripotency

scientific article published on 28 February 2020

Dynamic Reorganization of Extremely Long-Range Promoter-Promoter Interactions between Two States of Pluripotency

scientific article published in December 2015

Dynamic binding of RBPJ is determined by Notch signaling status.

scientific article published on May 2013

Dynamic chromatin organization: Role in development and disease

scientific article published on 11 May 2016

Dynamic histone H3 epigenome marking during the intraerythrocytic cycle of Plasmodium falciparum

scholarly article

Dynamics of Transcription Regulation in Human Bone Marrow Myeloid Differentiation to Mature Blood Neutrophils

scientific article published on 01 September 2018

Dynamics of gene silencing during X inactivation using allele-specific RNA-seq.

scientific article

Dynamics of genome architecture and chromatin function during human B cell differentiation and neoplastic transformation

scientific article published on 28 January 2021

E-cadherin loss induces targetable autocrine activation of growth factor signalling in lobular breast cancer

scientific article published in Scientific Reports

E2F transcriptional repressor complexes are critical downstream targets of p19(ARF)/p53-induced proliferative arrest

scientific article published on July 2002

ERG and FLI1 binding sites demarcate targets for aberrant epigenetic regulation by AML1-ETO in acute myeloid leukemia

scientific article

Environment-induced epigenetic reprogramming in genomic regulatory elements in smoking mothers and their children

scientific article published on 24 March 2016

Epigenetic Repression of Androgen Receptor Transcription in Mutation-Negative Androgen Insensitivity Syndrome (AIS Type II)

scientific article published on 01 December 2018

Epigenetic memory: A macrophage perspective

scientific article

Epigenetic modulation of a hardwired 3D chromatin landscape in two naive states of pluripotency

scientific article published on 29 April 2019

Epigenetic programming of monocyte-to-macrophage differentiation and trained innate immunity.

scientific article published on September 2014

Epigenetic reader complexes of the human malaria parasite, Plasmodium falciparum.

scientific article published on 16 December 2019

Epigenetic regulation of learning and memory by Drosophila EHMT/G9a

scientific article

Epigenomic and functional dynamics of human bone marrow myeloid differentiation to mature blood neutrophils

Epigenomics: Roadmap for regulation

scientific article published in February 2015

Epitope analysis of the malaria surface antigen pfs48/45 identifies a subdomain that elicits transmission blocking antibodies.

scientific article published on 9 April 2007

Erratum to: Dynamics of gene silencing during X inactivation using allele-specific RNA-seq.

scientific article published on 5 February 2016

Evidence for a dynamic role of the linker histone variant H1x during retinoic acid-induced differentiation of NT2 cells

scientific article published on 26 October 2010

Experimentally controlled downregulation of the histone chaperone FACT in Plasmodium berghei reveals that it is critical to male gamete fertility

scientific article (publication date: December 2011)

Exploring rare and low-frequency variants in the Saguenay-Lac-Saint-Jean population identified genes associated with asthma and allergy traits

scientific article published on 11 September 2018

Extensive epigenomic integration of the glucocorticoid response in primary human monocytes and in vitro derived macrophages

scientific article published on 26 February 2019

FACIL: Fast and Accurate Genetic Code Inference and Logo

scientific article

GATA3-dependent cellular reprogramming requires activation-domain dependent recruitment of a chromatin remodeler

scientific article published on 27 February 2016

Genetic Drivers of Epigenetic and Transcriptional Variation in Human Immune Cells

scientific article

Genome-wide analysis of ETS-family DNA-binding in vitro and in vivo

scientific article

Genome-wide analysis of differential transcriptional and epigenetic variability across human immune cell types

scientific article published on 26 January 2017

Genome-wide binding of MBD2 reveals strong preference for highly methylated loci

scientific article

Genome-wide epigenomic profiling for biomarker discovery

scientific article

Genome-wide modeling of transcription kinetics reveals patterns of RNA production delays ⬇️

scientific article

Genome-wide pattern of TCF7L2/TCF4 chromatin occupancy in colorectal cancer cells

scientific article published on 11 February 2008

Genome-wide profiling of PPARgamma:RXR and RNA polymerase II occupancy reveals temporal activation of distinct metabolic pathways and changes in RXR dimer composition during adipogenesis ⬇️

scientific article published on November 2008

Genome-wide profiling of liver X receptor, retinoid X receptor, and peroxisome proliferator-activated receptor α in mouse liver reveals extensive sharing of binding sites

scientific article published on 12 December 2011

Genome-wide profiling of p63 DNA-binding sites identifies an element that regulates gene expression during limb development in the 7q21 SHFM1 locus.

scientific article

Genomic actions of estrogen receptor alpha: what are the targets and how are they regulated?

scientific article published on 23 July 2009

Genomics meets proteomics: identifying the culprits in disease

scientific article

Global histone analysis by mass spectrometry reveals a high content of acetylated lysine residues in the malaria parasite Plasmodium falciparum

scientific article

Glucocorticoid receptor and nuclear factor kappa-b affect three-dimensional chromatin organization

scientific article

Glutaminolysis and Fumarate Accumulation Integrate Immunometabolic and Epigenetic Programs in Trained Immunity

scientific article published on 16 November 2016

H2A.Z demarcates intergenic regions of the plasmodium falciparum epigenome that are dynamically marked by H3K9ac and H3K4me3

scientific article (publication date: 16 December 2010)

H2A.Z/H2B.Z double-variant nucleosomes inhabit the AT-rich promoter regions of the Plasmodium falciparum genome

scientific article (publication date: March 2013)

HRDetect is a predictor of BRCA1 and BRCA2 deficiency based on mutational signatures

scientific article published on 13 March 2017

High-resolution analysis of epigenetic changes associated with X inactivation.

scientific article published on 06 July 2009

Histone modification patterns associated with the human X chromosome

scientific article

I Remember You: Epigenetic Priming in Epithelial Stem Cells

scientific article

Identification of novel functional TBP-binding sites and general factor repertoires

scientific article

Immuno-detection by sequencing enables large-scale high-dimensional phenotyping in cells.

scientific article published on 19 June 2018

Impairment of DNA Methylation Maintenance Is the Main Cause of Global Demethylation in Naive Embryonic Stem Cells

scientific article published on 25 May 2016

Impairment of DNA Methylation Maintenance Is the Main Cause of Global Demethylation in Naive Embryonic Stem Cells

scientific article

In vitro targeting reveals intrinsic histone tail specificity of the Sin3/histone deacetylase and N-CoR/SMRT corepressor complexes

scientific article published on March 2004

In vivo repression of an erythroid-specific gene by distinct corepressor complexes

scientific article published on March 2002

Increased H3K9 methylation and impaired expression of Protocadherins are associated with the cognitive dysfunctions of the Kleefstra syndrome

scientific article published on 15 March 2018

Indole-derived psammaplin A analogues as epigenetic modulators with multiple inhibitory activities

scientific article

Inference of RNA polymerase II transcription dynamics from chromatin immunoprecipitation time course data

scientific article

Information recovery from low coverage whole-genome bisulfite sequencing.

scientific article published on 27 June 2016

Inhibition of Histone Demethylases LSD1 and UTX Regulates ERα Signaling in Breast Cancer

scientific article published on 16 December 2019

Insightful tales from single embryonic cells

scientific article published on 01 May 2010

Integrated transcriptional analysis unveils the dynamics of cellular differentiation in the developing mouse hippocampus

scientific article published on 22 December 2017

Integrative analysis of deep sequencing data identifies estrogen receptor early response genes and links ATAD3B to poor survival in breast cancer

scientific article

International network of cancer genome projects

scientific article

Jmjd2c facilitates the assembly of essential enhancer-protein complexes at the onset of embryonic stem cell differentiation

scientific article published on 13 January 2017

Landscape of somatic mutations in 560 breast cancer whole-genome sequences

scientific article

Lineage-Specific Genome Architecture Links Enhancers and Non-coding Disease Variants to Target Gene Promoters

scientific article

Linear amplification for deep sequencing ⬇️

scientific article published on June 23, 2011

MBD2 and MBD3: elusive functions and mechanisms

scientific article

MBD2/NuRD and MBD3/NuRD, two distinct complexes with different biochemical and functional properties.

scientific article published on February 2006

MEIS2 Is an Oncogenic Partner in AML1-ETO-Positive AML.

scientific article published on 22 June 2016

MINCR is a MYC-induced lncRNA able to modulate MYC's transcriptional network in Burkitt lymphoma cells

scientific article

Malaria: could its unusual epigenome be the weak spot?

scientific article published on 18 March 2010

Mammalian embryo comparison identifies novel pluripotency genes associated with the naïve or primed state

scientific article published on 17 August 2018

MicroRNA-Assisted Hormone Cell Signaling in Colorectal Cancer Resistance

scientific article published on 30 December 2020

Mll2 is required for H3K4 trimethylation on bivalent promoters in embryonic stem cells, whereas Mll1 is redundant

scientific article published on 14 January 2014

Molecular characterization of Sin3 PAH-domain interactor specificity and identification of PAH partners

scientific article published on 12 August 2006

Molecular determinants of the interaction of Mad with the PAH2 domain of mSin3.

scientific article published on 26 March 2004

Molecular mechanism of anaerobic ammonium oxidation.

scientific article

Multi-omics profiling reveals a distinctive epigenome signature for high-risk acute promyelocytic leukemia.

scientific article

Mutant p63 Affects Epidermal Cell Identity through Rewiring the Enhancer Landscape

scientific article published on 01 December 2018

N6-methyladenosine (m6A) recruits and repels proteins to regulate mRNA homeostasis.

scientific article published on 4 September 2017

Non-canonical PRC1.1 Targets Active Genes Independent of H3K27me3 and Is Essential for Leukemogenesis.

scientific article published on 30 December 2015

Non-coding recurrent mutations in chronic lymphocytic leukaemia

scientific article published in Nature

Nontypeable Haemophilus influenzae carbonic anhydrase is important for environmental and intracellular survival.

scientific article published on 5 April 2013

Otx2 and Oct4 drive early enhancer activation during embryonic stem cell transition from naive pluripotency

scientific article

PML-RARalpha/RXR Alters the Epigenetic Landscape in Acute Promyelocytic Leukemia.

scientific article

PRC1 Prevents Replication Stress during Chondrogenic Transit Amplification

scientific article published on 11 December 2017

Partially methylated domains are hypervariable in breast cancer and fuel widespread CpG island hypermethylation

article

Pcl-PRC2 is needed to generate high levels of H3-K27 trimethylation at Polycomb target genes

scientific article

Peroxisome proliferator-activated receptor gamma regulates expression of the anti-lipolytic G-protein-coupled receptor 81 (GPR81/Gpr81).

scientific article

Peroxisome proliferator-activated receptor subtype- and cell-type-specific activation of genomic target genes upon adenoviral transgene delivery

scientific article published on August 2006

Placing the Plasmodium falciparum epigenome on the map ⬇️

scientific article published on September 18, 2012

Plasmodium falciparum centromeres display a unique epigenetic makeup and cluster prior to and during schizogony

scientific article (publication date: September 2012)

Plasmodium falciparum heterochromatin protein 1 marks genomic loci linked to phenotypic variation of exported virulence factors

scientific article published in September 2009

Platelet function is modified by common sequence variation in megakaryocyte super enhancers

scientific article

Proteomic profiling of Plasmodium sporozoite maturation identifies new proteins essential for parasite development and infectivity

scientific article

Publisher Correction: Epigenetic modulation of a hardwired 3D chromatin landscape in two naive states of pluripotency

scientific article published on 01 July 2019

Quantitative comparison of genome-wide DNA methylation mapping technologies.

scientific article published on 19 September 2010

RAD21 cooperates with pluripotency transcription factors in the maintenance of embryonic stem cell identity

scientific article

RIP1-HAT1-SirT complex identification and targeting in treatment and prevention of cancer.

scientific article published on 13 March 2018

Recent insights into Histone Acetyltransferase-1: biological function and involvement in pathogenesis

scientific article published on 04 October 2020

Recruitment of the Mammalian Histone-modifying EMSY Complex to Target Genes Is Regulated by ZNF131

scientific article published on 3 February 2016

Regulation of DNA methylation patterns by CK2-mediated phosphorylation of Dnmt3a.

scientific article

Relationship between genome and epigenome--challenges and requirements for future research

scientific article published on 18 June 2014

Report on EU-USA workshop: how systems biology can advance cancer research (27 October 2008)

scientific article

Restoring polyamines protects from age-induced memory impairment in an autophagy-dependent manner

scientific article published in September 2013

Rewiring of glucose metabolism defines trained immunity induced by oxidized low-density lipoprotein

scientific article published on 30 April 2020

Role of p53 serine 46 in p53 target gene regulation

scientific article

SMIM1 underlies the Vel blood group and influences red blood cell traits

scientific article

SS18 together with animal-specific factors defines human BAF-type SWI/SNF complexes

scientific article published in 2012

STARR-seq identifies active, chromatin-masked, and dormant enhancers in pluripotent mouse embryonic stem cells

scientific article published on 10 September 2020

Saturation analysis for whole-genome bisulfite sequencing data

scientific article

Sequence requirements for the export of the Plasmodium falciparum Maurer's clefts protein REX2.

scientific article published on 18 December 2008

Sequential ChIP-bisulfite sequencing enables direct genome-scale investigation of chromatin and DNA methylation cross-talk

scientific article

Single cell transcriptome atlas of immune cells in human small intestine and in celiac disease ⬇️

report published in 2019

Streptococcus pneumoniae folate biosynthesis responds to environmental CO2 levels

scientific article

Temporal uncoupling of the DNA methylome and transcriptional repression during embryogenesis

scientific article

The Allelic Landscape of Human Blood Cell Trait Variation and Links to Common Complex Disease

scientific article

The Hematopoietic Transcription Factors RUNX1 and ERG Prevent AML1-ETO Oncogene Overexpression and Onset of the Apoptosis Program in t(8;21) AMLs.

scientific article published in November 2016

The Human EKC/KEOPS Complex Is Recruited to Cullin2 Ubiquitin Ligases by the Human Tumour Antigen PRAME ⬇️

scientific article published on August 13, 2012

The International Human Epigenome Consortium: A Blueprint for Scientific Collaboration and Discovery

scientific article

The Organoid Cell Atlas

scientific article

The Organoid Cell Atlas: A Rosetta Stone for Biomedical Discovery and Regenerative Therapy ⬇️

journal article published in 2020

The SMAD2/3 interactome reveals that TGFβ controls m6A mRNA methylation in pluripotency

scientific article published on 28 February 2018

The circular RNome of primary breast cancer

scientific article published on 28 January 2019

The class I-specific HDAC inhibitor MS-275 modulates the differentiation potential of mouse embryonic stem cells

scientific article

The decade of the epigenomes?

scientific article

The gene encoding the Acyl-CoA-binding protein is activated by peroxisome proliferator-activated receptor gamma through an intronic response element functionally conserved between humans and rodents

scientific journal article

The interplay of epigenetic marks during stem cell differentiation and development

scientific article published on 14 August 2017

The new frontier in cancer research: deciphering cancer epigenetics.

scientific article published on 21 March 2007

The non-coding variant rs1800734 enhances DCLK3 expression through long-range interaction and promotes colorectal cancer progression

scientific article published on 14 February 2017

The reference epigenome and regulatory chromatin landscape of chronic lymphocytic leukemia

scientific article published on 21 May 2018

The tetraspanin CD9 affords high-purity capture of all murine hematopoietic stem cells.

scientific article published on 15 August 2013

The topography of mutational processes in breast cancer genomes

scientific article published on 02 May 2016

The transcriptional and epigenomic foundations of ground state pluripotency.

scientific article

The translational landscape of ground state pluripotency

scientific article published on 01 April 2020

The tumour antigen PRAME is a subunit of a Cul2 ubiquitin ligase and associates with active NFY promoters

scientific article

Three members of the 6-cys protein family of Plasmodium play a role in gamete fertility

scientific article

Time for Epigenetics

scientific article published on 21 September 2008

Time-resolved analysis of DNA-protein interactions in living cells by UV laser pulses.

scientific article published on 15 September 2017

Towards cracking the epigenetic code using a combination of high-throughput epigenomics and quantitative mass spectrometry-based proteomics

scientific article published on 24 May 2011

Tracking the embryonic stem cell transition from ground state pluripotency

scientific article

Trained immunity: A program of innate immune memory in health and disease.

scientific article

Transcription factor p63 bookmarks and regulates dynamic enhancers during epidermal differentiation.

scientific article

Transcription regulation and chromatin structure in the pluripotent ground state

scientific article published on 02 October 2013

Transcriptional Landscape of Human Tissue Lymphocytes Unveils Uniqueness of Tumor-Infiltrating T Regulatory Cells.

scientific article

Transcriptional and epigenetic control in mouse pluripotency: lessons from in vivo and in vitro studies

scientific article published on 29 July 2017

Transcriptional and functional profiling defines human small intestinal macrophage subsets.

scientific article published on 22 December 2017

Transcriptional diversity during lineage commitment of human blood progenitors

scientific article

Transcriptome Analysis Using RNA-Seq ⬇️

scientific article published on January 1, 2013

Uncleaved TFIIA is a substrate for taspase 1 and active in transcription

scientific article

Uncovering common principles in protein export of malaria parasites

scientific article published on November 2012

Uric acid priming in human monocytes is driven by the AKT-PRAS40 autophagy pathway

scientific article published on 8 May 2017

Vitamin C and l-Proline Antagonistic Effects Capture Alternative States in the Pluripotency Continuum

scientific article published on 19 December 2016

Whole-epigenome analysis in multiple myeloma reveals DNA hypermethylation of B cell-specific enhancers.

scientific article

Whole-genome DNA methylation profiling using MethylCap-seq.

scientific article published on 11 June 2010

Whole-genome bisulfite sequencing of two distinct interconvertible DNA methylomes of mouse embryonic stem cells

scientific article published on 11 July 2013

Whole-genome fingerprint of the DNA methylome during human B cell differentiation

scientific article

ZMYND8 Co-localizes with NuRD on Target Genes and Regulates Poly(ADP-Ribose)-Dependent Recruitment of GATAD2A/NuRD to Sites of DNA Damage.

scientific article published in October 2016

c-Myc Modulation and Acetylation Is a Key HDAC Inhibitor Target in Cancer.

scientific article

eFORGE: A Tool for Identifying Cell Type-Specific Signal in Epigenomic Data

scientific article

mTOR- and HIF-1α-mediated aerobic glycolysis as metabolic basis for trained immunity.

scientific article

p120-catenin-dependent collective brain infiltration by glioma cell networks

scientific article published on 06 January 2020

p300 is involved in formation of the TBP-TFIIA-containing basal transcription complex, TAC.

scientific article

p63 exerts spatio-temporal control of palatal epithelial cell fate to prevent cleft palate

scientific article

β-Glucan Reverses the Epigenetic State of LPS-Induced Immunological Tolerance

scientific article

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