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List of works by Qingshun Quinn Li

A Genome-wide Study of "Non-3UTR" Polyadenylation Sites in Arabidopsis thaliana.

scientific article published on 15 June 2016

A Novel Plant in Vitro Assay System for Pre-mRNA Cleavage during 3′-End Formation

scientific article published on September 9, 2011

APAtrap: identification and quantification of alternative polyadenylation sites from RNA-seq data.

scientific article published on 18 January 2018

Adaptive transgenerational effects remain significant

scientific article published on 26 August 2020

Addressing the unmet need for visualizing conditional random fields in biological data

scientific article

Alternative polyadenylation and gene expression regulation in plants.

scientific article

Alternative polyadenylation is involved in auxin-based plant growth and development.

scientific article published on 20 November 2017

Bioinformatics Analysis of Chicken miRNAs Associated with Monocyte to Macrophage Differentiation and Subsequent IFNg Stimulated Activation.

scientific article

Bioinformatics analysis of alternative polyadenylation in green alga Chlamydomonas reinhardtii using transcriptome sequences from three different sequencing platforms

scientific article

Characterization of plant polyadenylation complexes by using tandem affinity purification

scientific article published on 01 January 2015

Computational analysis of plant polyadenylation signals

scientific article published on January 2015

DNA/RNA hybrid primer mediated poly(A) tag library construction for Illumina sequencing

scientific article published on January 2015

Differential alternative polyadenylation contributes to the developmental divergence between two rice subspecies, japonica and indica

scientific article published on 13 February 2019

Distinct genome-wide alternative polyadenylation during the response to silicon availability in the marine diatom Thalassiosira pseudonana

scientific article published on 01 April 2019

Environment-induced heritable variations are common in Arabidopsis thaliana

scientific article published on 30 May 2024

Extraction of poly(A) sites from large-scale RNA-Seq data.

scientific article

Genetic admixture accelerates invasion via provisioning rapid adaptive evolution

scientific article published on 02 September 2019

Genome-Wide Comparative Analyses of Polyadenylation Signals in Eukaryotes Suggest a Possible Origin of the AAUAAA Signal

scientific article published on 22 February 2019

Genome-Wide Comparative Analysis of Miniature Inverted Repeat Transposable Elements in 19 Arabidopsis thaliana Ecotype Accessions.

scientific article published on June 2017

Genome-wide alternative polyadenylation dynamics in response to biotic and abiotic stresses in rice

scientific article published on 31 July 2019

Genome-wide characterization of intergenic polyadenylation sites redefines gene spaces in Arabidopsis thaliana.

scientific article published on 9 July 2015

Genome-wide control of polyadenylation site choice by CPSF30 in Arabidopsis.

scientific article published on 6 November 2012

Genome-wide determination of poly(A) sites in Medicago truncatula: evolutionary conservation of alternative poly(A) site choice.

scientific article

Genome-wide dynamics of alternative polyadenylation in rice.

scientific article published on 12 October 2016

Genome-wide identification and predictive modeling of polyadenylation sites in eukaryotes

scientific article published on April 2014

HDA6 dependent chromatin deacetylation orchestrates mRNA polyadenylation

scientific article published on 05 August 2020

High throughput characterizations of poly(A) site choice in plants.

scientific article published on 11 July 2013

Identification of putative key genes for coastal environments and cold adaptation in mangrove Kandelia obovata through transcriptome analysis

scientific article published on 11 May 2019

In vitro analysis of cleavage and polyadenylation in Arabidopsis

scientific article published on 01 January 2015

Integration of developmental and environmental signals via a polyadenylation factor in Arabidopsis.

scientific article

Interplay between Alternative Splicing and Alternative Polyadenylation Defines the Expression Outcome of the Plant Unique OXIDATIVE TOLERANT-6 Gene

scientific article published on 17 May 2017

Plant polyadenylation factors: conservation and variety in the polyadenylation complex in plants.

scientific article

PlantAPA: A Portal for Visualization and Analysis of Alternative Polyadenylation in Plants

scientific article

Plastid development of albino viviparous propagules in the woody mangrove species of <i>Kandelia obovata</i>

scientific article published in 2022

Poly(A) tag library construction from 10 ng total RNA.

scientific article published on January 2015

Poly(A)-tag deep sequencing data processing to extract poly(A) sites

scientific article

Prediction of plant mRNA polyadenylation sites.

scientific article published on January 2015

RADPRE: a computational program for identification of differential mRNA processing including alternative polyadenylation

scientific article published on January 2015

Role of alternative polyadenylation dynamics in acute myeloid leukaemia at single-cell resolution

scientific article published on 13 March 2019

Role of alternative polyadenylation in epigenetic silencing and antisilencing

scientific article published on 13 December 2013

Role of cleavage and polyadenylation specificity factor 100: anchoring poly(A) sites and modulating transcription termination.

scientific article

Root Hair Single Cell Type Specific Profiles of Gene Expression and Alternative Polyadenylation Under Cadmium Stress

scientific article published on 10 May 2019

The regulatory role of Pcf11-similar-4 (PCFS4) in Arabidopsis development by genome-wide physical interactions with target loci.

scientific article published on 03 September 2013

Transcriptome Analyses of FY Mutants Reveal Its Role in mRNA Alternative Polyadenylation

scientific article published on 19 August 2019

Transcriptome profiling during mangrove viviparity in response to abscisic acid.

scientific article published on 15 January 2018

Transgenerational effects benefit offspring across diverse environments: a meta-analysis in plants and animals

scientific article published on 21 August 2019

scDAPA: detection and visualization of dynamic alternative polyadenylation from single cell RNA-seq data

scientific article published on 01 February 2020