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List of works by Ulrike Korf

A Systems Biology Approach to Deciphering the Etiology of Steatosis Employing Patient-Derived Dermal Fibroblasts and iPS Cells

scientific article

A novel cell-cell junction system: the cortex adhaerens mosaic of lens fiber cells

scientific article (publication date: 15 December 2003)

Activation of AMP-activated protein kinase sensitizes lung cancer cells and H1299 xenografts to erlotinib

scientific article published on 10 September 2014

Analysis of Reverse Phase Protein Array Data: From Experimental Design towards Targeted Biomarker Discovery

scientific article

Antibody microarrays as an experimental platform for the analysis of signal transduction networks

scientific article published on January 2008

Antibody-mediated signal amplification for reverse phase protein array-based protein quantification

scientific article published in January 2011

Automated production of recombinant human proteins as resource for proteome research

scientific article

Boolean ErbB network reconstructions and perturbation simulations reveal individual drug response in different breast cancer cell lines

scientific article

Combinatorial RNAi for quantitative protein network analysis

scholarly article

Comparison of protein expression profiles between monolayer and spheroid cell culture of HT-29 cells revealed fragmentation of CK18 in three-dimensional cell culture

scientific article

Contact spotting of protein microarrays coupled with spike-in of normalizer protein permits time-resolved analysis of ERBB receptor signaling

scientific article

Coordinated Pulses of mRNA and of Protein Translation or Degradation Produce EGF-Induced Protein Bursts

scientific article published on March 2017

Dynamic Bayesian Network Modeling of the Interplay between EGFR and Hedgehog Signaling

scientific article published on 16 November 2015

Dynamic deterministic effects propagation networks: learning signalling pathways from longitudinal protein array data

scientific article

Evaluation of reverse phase protein array (RPPA)-based pathway-activation profiling in 84 non-small cell lung cancer (NSCLC) cell lines as platform for cancer proteomics and biomarker discovery

scientific article published on 19 December 2013

From ORFeome to biology: a functional genomics pipeline

scientific article

Global microRNA level regulation of EGFR-driven cell-cycle protein network in breast cancer

scientific article

Human Proteinpedia enables sharing of human protein data

scientific article

Increasing the sensitivity of reverse phase protein arrays by antibody-mediated signal amplification

scientific article published on 22 June 2010

Inferring signalling networks from longitudinal data using sampling based approaches in the R-package 'ddepn'

scientific article

Infrared-based protein detection arrays for quantitative proteomics

scientific article published on February 2007

Large-scale protein expression for proteome research

scientific article published in September 2005

Liquid-phase electron microscopy of molecular drug response in breast cancer cells reveals irresponsive cell subpopulations related to lack of HER2 homodimers

scientific article

Local variations of HER2 dimerization in breast cancer cells discovered by correlative fluorescence and liquid electron microscopy

scientific article

Metabolic transformations in breast cancer subtypes.

scientific article

Microspot Immunoassay-Based Analysis of Plasma Protein Profiles for Biomarker Discovery Strategies ⬇️

scientific article published on 01 January 2011

Modeling ERBB receptor-regulated G1/S transition to find novel targets for de novo trastuzumab resistance

scientific article

Modeling breast cell cycle regulation--overcoming drug resistance

scientific article

Multi-omic profiles of human non-alcoholic fatty liver disease tissue highlight heterogenic phenotypes

scientific article

Peroxiredoxins 3 and 4 Are Overexpressed in Prostate Cancer Tissue and Affect the Proliferation of Prostate Cancer Cells in Vitro ⬇️

scientific article published on March 28, 2012

Profiling metabolic changes in breast cancer with targeted proteomics

Protein microarrays as a discovery tool for studying protein-protein interactions

scientific article

Proteomic profiling of breast cancer metabolism identifies SHMT2 and ASCT2 as prognostic factors

scientific article published on 11 October 2017

QuantProReloaded: quantitative analysis of microspot immunoassays

scientific article

Quantitative analysis of phosphoproteins using microspot immunoassays

scientific article published on 01 January 2011

Quantitative protein microarrays for time-resolved measurements of protein phosphorylation

scientific article published in November 2008

RNAi-based validation of antibodies for reverse phase protein arrays

scientific article

RPPanalyzer toolbox: an improved R package for analysis of reverse phase protein array data

scientific article

RPPanalyzer: Analysis of reverse-phase protein array data

scientific article

Realizing the promise of reverse phase protein arrays for clinical, translational, and basic research: a workshop report: the RPPA (Reverse Phase Protein Array) society

scientific article

Reconstruction of Protein Networks Using Reverse-Phase Protein Array Data

scientific article

Reverse phase protein array based tumor profiling identifies a biomarker signature for risk classification of hormone receptor-positive breast cancer

Reverse-phase protein arrays for application-orientated cancer research

scientific article published on 04 August 2009

Subtyping of breast cancer using reverse phase protein arrays

scientific article

Synergism between Hedgehog-GLI and EGFR signaling in Hedgehog-responsive human medulloblastoma cells induces downregulation of canonical Hedgehog-target genes and stabilized expression of GLI1

scientific article

Systematic comparison of surface coatings for protein microarrays

scholarly article by Birgit Guilleaume published in December 2005

TMPRSS2-ERG -specific transcriptional modulation is associated with prostate cancer biomarkers and TGF-β signaling.

scientific article

Triplex DNA-binding proteins are associated with clinical outcomes revealed by proteomic measurements in patients with colorectal cancer

scientific article published on 8 June 2012

Unbiased RNAi screen for hepcidin regulators links hepcidin suppression to proliferative Ras/RAF and nutrient-dependent mTOR signaling

scientific article published on 02 January 2014

Utilization of RNAi to Validate Antibodies for Reverse Phase Protein Arrays ⬇️

scientific article published on January 1, 2011

uPA and PAI-1-Related Signaling Pathways Differ between Primary Breast Cancers and Lymph Node Metastases

scientific article published on April 2012

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