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List of works by Kiri Choi

A portable structural analysis library for reaction networks

scientific article published on 30 May 2018

Controlling E. coli Gene Expression Noise

scientific article

Quantitative mapping of diffusion characteristics under the cortical surface.

scientific article published on 5 May 2010

Recent advances in biomedical simulations: a manifesto for model engineering

scientific article published on 05 March 2019

Reproducible, Robust, and Reliable Biochemical Reaction Network Models for Systems Biology ⬇️

doctoral thesis by Kiri Choi, University of Washington, 2019

Synthetic Biology Open Language (SBOL) Version 2.1.0.

scientific article published on 18 December 2016

Synthetic Biology Open Language (SBOL) Version 2.2.0.

scientific article published on 2 April 2018

Synthetic Biology Open Language (SBOL) Version 2.3.

scientific article published on 13 June 2019

Tellurium notebooks-An environment for reproducible dynamical modeling in systems biology.

scientific article published on 15 June 2018

Tellurium: An extensible python-based modeling environment for systems and synthetic biology

scientific article published on 25 July 2018

libRoadRunner 2.0: a high performance SBML simulation and analysis library

scientific article published in 2022

phraSED-ML: A paraphrased, human-readable adaptation of SED-ML.

scientific article

pySBOL: A Python Package for Genetic Design Automation and Standardization

scientific article published on 06 December 2018

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