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List of works by Barry M Zee

Asymmetrically modified nucleosomes

scientific article

BioTAP-XL: Cross-linking/Tandem Affinity Purification to Study DNA Targets, RNA, and Protein Components of Chromatin-Associated Complexes

scientific article

Bivalent complexes of PRC1 with orthologs of BRD4 and MOZ/MORF target developmental genes in Drosophila.

scientific article

Breaking the histone code with quantitative mass spectrometry.

scientific article published on October 2011

De novo peptide design and experimental validation of histone methyltransferase inhibitors

scientific article

De novo peptide design and experimental validation of histone methyltransferase inhibitors

scientific article published in PLoS ONE

Dietary lipid saturation influences environmental temperature preference but not resting metabolic rate in the Djungarian Hamster (Phodopus sungorus).

scientific article published on 8 June 2012

Discovery of lysine post-translational modifications through mass spectrometric detection ⬇️

scientific article published on January 1, 2012

Dysregulation of PAD4-mediated citrullination of nuclear GSK3β activates TGF-β signaling and induces epithelial-to-mesenchymal transition in breast cancer cells.

scientific article published on July 2013

Ectopic protein interactions within BRD4-chromatin complexes drive oncogenic megadomain formation in NUT midline carcinoma

scientific article published on 8 May 2017

Global secretome analysis identifies novel mediators of bone metastasis.

scientific article

Global turnover of histone post-translational modifications and variants in human cells ⬇️

scientific article published on December 6, 2010

Heavy methyl-SILAC labeling coupled with liquid chromatography and high-resolution mass spectrometry to study the dynamics of site-specific histone methylation

scientific article

Heterochromatin-associated interactions of Drosophila HP1a with dADD1, HIPP1, and repetitive RNAs

scientific article

High resolution is not a strict requirement for characterization and quantification of histone post-translational modifications.

scientific article

Histone methylation has dynamics distinct from those of histone acetylation in cell cycle reentry from quiescence.

scientific article

Intersection of Epigenetic and Metabolic Regulation of Histone Modifications in Acute Myeloid Leukemia

scientific article published on 22 May 2019

Isoform-specific phosphorylation of human linker histone H1.4 in mitosis by the kinase Aurora B.

scientific article

Origins and formation of histone methylation across the human cell cycle.

scientific article

Proteogenomic characterization and mapping of nucleosomes decoded by Brd and HP1 proteins.

scientific article

Proteogenomics analysis reveals specific genomic orientations of distal regulatory regions composed by non-canonical histone variants.

scientific article

Proteomic Interrogation of Human Chromatin ⬇️

scientific article published on September 14, 2011

Quantitative dynamics of the link between cellular metabolism and histone acetylation.

scientific article published on 12 March 2013

Quantitative proteomic approaches to studying histone modifications.

scientific article

Re-programing Chromatin with a Bifunctional LSD1/HDAC Inhibitor Induces Therapeutic Differentiation in DIPG

scientific article published on 17 October 2019

Sex comb on midleg (Scm) is a functional link between PcG-repressive complexes in Drosophila

scientific article published on June 2015

Streamlined discovery of cross-linked chromatin complexes and associated histone modifications by mass spectrometry.

scientific article published on February 2016

The Oncoprotein BRD4-NUT Generates Aberrant Histone Modification Patterns

scientific article

The RING finger protein MSL2 in the MOF complex is an E3 ubiquitin ligase for H2B K34 and is involved in crosstalk with H3 K4 and K79 methylation

scientific article

Validation of protein acetylation by mass spectrometry.

scientific article

upSET, the Drosophila homologue of SET3, Is Required for Viability and the Proper Balance of Active and Repressive Chromatin Marks.

scientific article published on 06 January 2017

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