List of works - Shiri Freilich

Analysis of Microbial Functions in the Rhizosphere Using a Metabolic-Network Based Framework for Metagenomics Interpretation

scientific article published on 23 August 2017

Association between translation efficiency and horizontal gene transfer within microbial communities

scientific article (publication date: June 2011)

Comparison of Four Comamonas Catabolic Plasmids Reveals the Evolution of pBHB To Catabolize Haloaromatics

scientific article published on 18 December 2015

Competitive and cooperative metabolic interactions in bacterial communities.

scientific article published on 13 December 2011

Construction, visualisation, and clustering of transcription networks from microarray expression data

scientific article

Decoupling Environment-Dependent and Independent Genetic Robustness across Bacterial Species

scientific article

Denoising inferred functional association networks obtained by gene fusion analysis

scientific article

Draft Genome Sequence of a Dyella-Like Bacterium from the Planthopper Hyalesthes obsoletus

scientific article published on 21 July 2016

Dyella-like bacterium isolated from an insect as a potential biocontrol agent against grapevine yellows

scientific article

Emergence, development and diversification of the TGF-beta signalling pathway within the animal kingdom

scientific article

Genome Analysis of Haplotype D of Liberibacter Solanacearum

scientific article published in 2018

Genome Sequence of "Candidatus Carsonella ruddii" Strain BT from the Psyllid Bactericera trigonica

scientific article

Haoranjiania flava gen. nov., sp. nov., a new member of the family Chitinophagaceae, isolated from activated sludge

scientific article

Host-Parasite-Bacteria Triangle: The Microbiome of the Parasitic Weed Phelipanche aegyptiaca and Tomato-Solanum lycopersicum (Mill.) as a Host

scientific article published on March 2017

Maximal sum of metabolic exchange fluxes outperforms biomass yield as a predictor of growth rate of microorganisms

scientific article

Metabolic innovations towards the human lineage

scientific article published on 9 September 2008

Metabolic-network-driven analysis of bacterial ecological strategies

scientific article published on 05 June 2009

Modeling trophic dependencies and exchanges among insects' bacterial symbionts in a host-simulated environment.

scientific article published on 25 May 2018

Multidimensional patterns of metabolic response in abiotic stress-induced growth of Arabidopsis thaliana

scientific article

NetCmpt: a network-based tool for calculating the metabolic competition between bacterial species

scientific article published on 4 June 2012

NetCooperate: a network-based tool for inferring host-microbe and microbe-microbe cooperation

scientific article published on 17 May 2015

Peptide markers of aminoacyl tRNA synthetases facilitate taxa counting in metagenomic data

scientific article

Prospects for Biological Soilborne Disease Control: Application of Indigenous Versus Synthetic Microbiomes

scientific article published on 29 November 2016

Protein coalitions in a core mammalian biochemical network linked by rapidly evolving proteins

scientific article

Relating tissue specialization to the differentiation of expression of singleton and duplicate mouse proteins

scientific article

Relationship between the tissue-specificity of mouse gene expression and the evolutionary origin and function of the proteins

scientific article

Stratification of co-evolving genomic groups using ranked phylogenetic profiles

scientific article

Systems approach for exploring the intricate associations between sweetness, color and aroma in melon fruits

scientific article published on 3 March 2015

The Interplay between Scientific Overlap and Cooperation and the Resulting Gain in Co-Authorship Interactions

scientific article published on 15 September 2015

The biosynthetic pathway of the nonsugar, high-intensity sweetener mogroside V from Siraitia grosvenorii

scientific article

The complement of enzymatic sets in different species

scientific article

The large-scale organization of the bacterial network of ecological co-occurrence interactions.

scientific article

To B or not to B: Arsenophonus as a source of B-vitamins in whiteflies

Variations in the identity and complexity of endosymbiont combinations in whitefly hosts

scientific article

List of works by Shiri Freilich

Analysis of Microbial Functions in the Rhizosphere Using a Metabolic-Network Based Framework for Metagenomics Interpretation

Association between translation efficiency and horizontal gene transfer within microbial communities

Comparison of Four Comamonas Catabolic Plasmids Reveals the Evolution of pBHB To Catabolize Haloaromatics

Competitive and cooperative metabolic interactions in bacterial communities.

Construction, visualisation, and clustering of transcription networks from microarray expression data

Decoupling Environment-Dependent and Independent Genetic Robustness across Bacterial Species

Denoising inferred functional association networks obtained by gene fusion analysis

Draft Genome Sequence of a Dyella-Like Bacterium from the Planthopper Hyalesthes obsoletus

Dyella-like bacterium isolated from an insect as a potential biocontrol agent against grapevine yellows

Emergence, development and diversification of the TGF-beta signalling pathway within the animal kingdom

Genome Analysis of Haplotype D of Liberibacter Solanacearum

Genome Sequence of "Candidatus Carsonella ruddii" Strain BT from the Psyllid Bactericera trigonica

Haoranjiania flava gen. nov., sp. nov., a new member of the family Chitinophagaceae, isolated from activated sludge

Host-Parasite-Bacteria Triangle: The Microbiome of the Parasitic Weed Phelipanche aegyptiaca and Tomato-Solanum lycopersicum (Mill.) as a Host

Maximal sum of metabolic exchange fluxes outperforms biomass yield as a predictor of growth rate of microorganisms

Metabolic innovations towards the human lineage

Metabolic-network-driven analysis of bacterial ecological strategies

Modeling trophic dependencies and exchanges among insects' bacterial symbionts in a host-simulated environment.

Multidimensional patterns of metabolic response in abiotic stress-induced growth of Arabidopsis thaliana

NetCmpt: a network-based tool for calculating the metabolic competition between bacterial species

NetCooperate: a network-based tool for inferring host-microbe and microbe-microbe cooperation

Peptide markers of aminoacyl tRNA synthetases facilitate taxa counting in metagenomic data

Prospects for Biological Soilborne Disease Control: Application of Indigenous Versus Synthetic Microbiomes

Protein coalitions in a core mammalian biochemical network linked by rapidly evolving proteins

Relating tissue specialization to the differentiation of expression of singleton and duplicate mouse proteins

Relationship between the tissue-specificity of mouse gene expression and the evolutionary origin and function of the proteins

Stratification of co-evolving genomic groups using ranked phylogenetic profiles

Systems approach for exploring the intricate associations between sweetness, color and aroma in melon fruits

The Interplay between Scientific Overlap and Cooperation and the Resulting Gain in Co-Authorship Interactions

The biosynthetic pathway of the nonsugar, high-intensity sweetener mogroside V from Siraitia grosvenorii

The complement of enzymatic sets in different species

The large-scale organization of the bacterial network of ecological co-occurrence interactions.

To B or not to B: Arsenophonus as a source of B-vitamins in whiteflies

Variations in the identity and complexity of endosymbiont combinations in whitefly hosts