List of works by Amy Chen

Complete Genome Sequence for sp. Strain OR53 and Draft Genome Sequence for sp. Strain OR43, Two Bacteria Tolerant to Uranium

Complete Genome Sequence of Clostridium clariflavum DSM 19732.

scientific article

Complete Genome Sequence of the Opitutaceae Bacterium Strain TAV5, a Potential Facultative Methylotroph of the Wood-Feeding Termite Reticulitermes flavipes

scientific article

Complete Genome of Enterobacteriaceae Bacterium Strain FGI 57, a Strain Associated with Leaf-Cutter Ant Fungus Gardens

scientific article published on January 2013

Complete Genome of Serratia sp. Strain FGI 94, a Strain Associated with Leaf-Cutter Ant Fungus Gardens

scientific article published on 14 March 2013

Complete genome sequence of "Enterobacter lignolyticus" SCF1

scientific article (publication date: 15 October 2011)

Complete genome sequence of 'Thermobaculum terrenum' type strain (YNP1).

scientific article

Complete genome sequence of Acetohalobium arabaticum type strain (Z-7288)

scientific article

Complete genome sequence of Acidaminococcus fermentans type strain (VR4).

scientific article

Complete genome sequence of Acidimicrobium ferrooxidans type strain (ICP).

scientific article

Complete genome sequence of Actinosynnema mirum type strain (101).

scientific article

Complete genome sequence of Alicyclobacillus acidocaldarius type strain (104-IA)

scientific article

Complete genome sequence of Aminobacterium colombiense type strain (ALA-1).

scientific article

Complete genome sequence of Anaerococcus prevotii type strain (PC1).

scientific article

Complete genome sequence of Arcanobacterium haemolyticum type strain (11018)

scientific article

Complete genome sequence of Archaeoglobus profundus type strain (AV18)

scientific article

Complete genome sequence of Arcobacter nitrofigilis type strain (CI)

scientific article

Complete genome sequence of Arthrobacter phenanthrenivorans type strain (Sphe3) ⬇️

scientific article

Complete genome sequence of Atopobium parvulum type strain (IPP 1246)

scientific article

Complete genome sequence of Bacteroides helcogenes type strain (P 36-108).

scientific article

Complete genome sequence of Bacteroides salanitronis type strain (BL78).

scientific article

Complete genome sequence of Beutenbergia cavernae type strain (HKI 0122).

scientific article

Complete genome sequence of Brachybacterium faecium type strain (Schefferle 6-10).

scientific article

Complete genome sequence of Brachyspira murdochii type strain (56-150)

scientific article

Complete genome sequence of Calditerrivibrio nitroreducens type strain (Yu37-1)

scientific article

Complete genome sequence of Capnocytophaga ochracea type strain (VPI 2845).

scientific article

Complete genome sequence of Catenulispora acidiphila type strain (ID 139908).

scientific article

Complete genome sequence of Cellulomonas flavigena type strain (134).

scientific article

Complete genome sequence of Cellulophaga algicola type strain (IC166)

scientific article

Complete genome sequence of Cellulophaga lytica type strain (LIM-21).

scientific article

Complete genome sequence of Chitinophaga pinensis type strain (UQM 2034).

scientific article

Complete genome sequence of Conexibacter woesei type strain (ID131577).

scientific article

Complete genome sequence of Coraliomargarita akajimensis type strain (04OKA010-24).

scientific article

Complete genome sequence of Coriobacterium glomerans type strain (PW2(T)) from the midgut of Pyrrhocoris apterus L. (red soldier bug).

scientific article

Complete genome sequence of Cryptobacterium curtum type strain (12-3)

scientific article

Complete genome sequence of Dehalobacter restrictus PER-K23(T.).

scientific article published on 30 July 2013

Complete genome sequence of Deinococcus maricopensis type strain (LB-34). ⬇️

scientific article

Complete genome sequence of Denitrovibrio acetiphilus type strain (N2460)

scientific article

Complete genome sequence of Desulfarculus baarsii type strain (2st14).

scientific article

Complete genome sequence of Desulfobulbus propionicus type strain (1pr3)

scientific article

Complete genome sequence of Desulfohalobium retbaense type strain (HR(100)).

scientific article

Complete genome sequence of Desulfomicrobium baculatum type strain (X)

scientific article

Complete genome sequence of Desulfotomaculum acetoxidans type strain (5575)

scientific article

Complete genome sequence of Desulfurococcus mucosus type strain (O7/1). ⬇️

scientific article

Complete genome sequence of Dyadobacter fermentans type strain (NS114)

scientific article

Complete genome sequence of Eggerthella lenta type strain (IPP VPI 0255).

scientific article

Complete genome sequence of Enterobacter sp. IIT-BT 08: A potential microbial strain for high rate hydrogen production

scientific article (publication date: 20 December 2013)

Complete genome sequence of Ferrimonas balearica type strain (PAT).

scientific article

Complete genome sequence of Geodermatophilus obscurus type strain (G-20)

scientific article

Complete genome sequence of Gordonia bronchialis type strain (3410).

scientific article

Complete genome sequence of Haliangium ochraceum type strain (SMP-2)

scientific article

Complete genome sequence of Haliscomenobacter hydrossis type strain (O)

scientific article

Complete genome sequence of Halogeometricum borinquense type strain (PR3)

scientific article

Complete genome sequence of Halomicrobium mukohataei type strain (arg-2)

scientific article

Complete genome sequence of Halorhabdus utahensis type strain (AX-2)

scientific article

Complete genome sequence of Haloterrigena turkmenica type strain (4k)

scientific article

Complete genome sequence of Hydrogenobacter thermophilus type strain (TK-6)

scientific article

Complete genome sequence of Ignisphaera aggregans type strain (AQ1.S1)

scientific article

Complete genome sequence of Ilyobacter polytropus type strain (CuHbu1). ⬇️

scientific article

Complete genome sequence of Intrasporangium calvum type strain (7 KIP).

scientific article

Complete genome sequence of Isosphaera pallida type strain (IS1B).

scientific article

Complete genome sequence of Jonesia denitrificans type strain (Prevot 55134)

scientific article

Complete genome sequence of Kangiella koreensis type strain (SW-125).

scientific article

Complete genome sequence of Kribbella flavida type strain (IFO 14399).

scientific article

Complete genome sequence of Kytococcus sedentarius type strain (541).

scientific article

Complete genome sequence of Leadbetterella byssophila type strain (4M15).

scientific article

Complete genome sequence of Leptotrichia buccalis type strain (C-1013-b).

scientific article

Complete genome sequence of Mahella australiensis type strain (50-1 BON).

scientific article

Complete genome sequence of Marivirga tractuosa type strain (H-43) ⬇️

scientific article

Complete genome sequence of Meiothermus ruber type strain (21)

scientific article

Complete genome sequence of Meiothermus silvanus type strain (VI-R2)

scientific article

Complete genome sequence of Mesorhizobium australicum type strain (WSM2073(T)).

scientific article

Complete genome sequence of Mesorhizobium australicum type strain (WSM2073T)

Complete genome sequence of Methanoplanus petrolearius type strain (SEBR 4847)

scientific article

Complete genome sequence of Methanothermus fervidus type strain (V24S)

scientific article

Complete genome sequence of Nakamurella multipartita type strain (Y-104).

scientific article

Complete genome sequence of Nitratifractor salsuginis type strain (E9I37-1).

scientific article

Complete genome sequence of Nitrosomonas sp. Is79, an ammonia oxidizing bacterium adapted to low ammonium concentrations

scientific article published on 25 February 2013

Complete genome sequence of Nocardiopsis dassonvillei type strain (IMRU 509).

scientific article

Complete genome sequence of Oceanithermus profundus type strain (506) ⬇️

scientific article

Complete genome sequence of Odoribacter splanchnicus type strain (1651/6). ⬇️

scientific article

Complete genome sequence of Olsenella uli type strain (VPI D76D-27C)

scientific article

Complete genome sequence of Paludibacter propionicigenes type strain (WB4).

scientific article

Complete genome sequence of Pedobacter heparinus type strain (HIM 762-3).

scientific article

Complete genome sequence of Pirellula staleyi type strain (ATCC 27377)

scientific article

Complete genome sequence of Planctomyces brasiliensis type strain (DSM 5305(T)), phylogenomic analysis and reclassification of Planctomycetes including the descriptions of Gimesia gen. nov., Planctopirus gen. nov. and Rubinisphaera gen. nov. and eme

scientific article

Complete genome sequence of Planctomyces limnophilus type strain (Mü 290).

scientific article

Complete genome sequence of Rhodothermus marinus type strain (R-10).

scientific article

Complete genome sequence of Riemerella anatipestifer type strain (ATCC 11845).

scientific article

Complete genome sequence of Riemerella anatipestifer type strain (ATCC 11845T)

article

Complete genome sequence of Saccharomonospora viridis type strain (P101).

scientific article

Complete genome sequence of Sanguibacter keddieii type strain (ST-74)

scientific article

Complete genome sequence of Sebaldella termitidis type strain (NCTC 11300).

scientific article

Complete genome sequence of Segniliparus rotundus type strain (CDC 1076)

scientific article

Complete genome sequence of Slackia heliotrinireducens type strain (RHS 1)

scientific article

Complete genome sequence of Sphaerobacter thermophilus type strain (S 6022)

scientific article

Complete genome sequence of Spirosoma linguale type strain (1)

scientific article

Complete genome sequence of Stackebrandtia nassauensis type strain (LLR-40K-21).

scientific article

Complete genome sequence of Streptobacillus moniliformis type strain (9901)

scientific article

Complete genome sequence of Streptosporangium roseum type strain (NI 9100).

scientific article

Complete genome sequence of Sulfurimonas autotrophica type strain (OK10).

scientific article

Complete genome sequence of Sulfurospirillum deleyianum type strain (5175).

scientific article

Complete genome sequence of Syntrophobotulus glycolicus type strain (FlGlyR).

scientific article

Complete genome sequence of Syntrophobotulus glycolicus type strain (FlGlyRT)

article

Complete genome sequence of Syntrophothermus lipocalidus type strain (TGB-C1)

scientific article

Complete genome sequence of Thermaerobacter marianensis type strain (7p75a)

scientific article

Complete genome sequence of Thermanaerovibrio acidaminovorans type strain (Su883).

scientific article

Complete genome sequence of Thermobispora bispora type strain (R51).

scientific article

Complete genome sequence of Thermocrinis albus type strain (HI 11/12)

scientific article

Complete genome sequence of Thermomonospora curvata type strain (B9).

scientific article

Complete genome sequence of Thermosediminibacter oceani type strain (JW/IW-1228P)

scientific article

Complete genome sequence of Thermosphaera aggregans type strain (M11TL)

scientific article

Complete genome sequence of Treponema succinifaciens type strain (6091).

scientific article

Complete genome sequence of Truepera radiovictrix type strain (RQ-24)

scientific article

Complete genome sequence of Tsukamurella paurometabola type strain (no. 33).

scientific article

Complete genome sequence of Veillonella parvula type strain (Te3)

scientific article

Complete genome sequence of Vulcanisaeta distributa type strain (IC-017)

scientific article

Complete genome sequence of Weeksella virosa type strain (9751).

scientific article

Complete genome sequence of Xylanimonas cellulosilytica type strain (XIL07)

scientific article

Complete genome sequence of the acetate-degrading sulfate reducer Desulfobacca acetoxidans type strain (ASRB2).

scientific article

Complete genome sequence of the aerobic, heterotroph Marinithermus hydrothermalis type strain (T1(T)) from a deep-sea hydrothermal vent chimney

scientific article

Complete genome sequence of the aquatic bacterium Runella slithyformis type strain (LSU 4(T)).

scientific article

Complete genome sequence of the bile-resistant pigment-producing anaerobe Alistipes finegoldii type strain (AHN2437(T)).

scientific article published on 15 April 2013

Complete genome sequence of the extremely halophilic Halanaerobium praevalens type strain (GSL)

scientific article

Complete genome sequence of the facultatively anaerobic, appendaged bacterium Muricauda ruestringensis type strain (B1(T)).

scientific article

Complete genome sequence of the gliding freshwater bacterium Fluviicola taffensis type strain (RW262).

scientific article

Complete genome sequence of the gliding, heparinolytic Pedobacter saltans type strain (113)

scientific article published on 23 September 2011

Complete genome sequence of the halophilic bacterium Spirochaeta africana type strain (Z-7692(T)) from the alkaline Lake Magadi in the East African Rift

scientific article published on 20 May 2013

Complete genome sequence of the hyperthermophilic chemolithoautotroph Pyrolobus fumarii type strain (1A)

scientific article

Complete genome sequence of the marine methyl-halide oxidizing Leisingera methylohalidivorans type strain (DSM 14336(T)), a representative of the Roseobacter clade

scientific article published on 04 October 2013

Complete genome sequence of the moderate thermophile Anaerobaculum mobile type strain (NGA(T)).

scientific article published on 15 April 2013

Complete genome sequence of the moderately thermophilic mineral-sulfide-oxidizing firmicute Sulfobacillus acidophilus type strain (NAL(T)).

scientific article published on 20 July 2012

Complete genome sequence of the orange-red pigmented, radioresistant Deinococcus proteolyticus type strain (MRP(T)).

scientific article

Complete genome sequence of the sulfur compounds oxidizing chemolithoautotroph Sulfuricurvum kujiense type strain (YK-1(T))

scientific article

Complete genome sequence of the termite hindgut bacterium Spirochaeta coccoides type strain (SPN1(T)), reclassification in the genus Sphaerochaeta as Sphaerochaeta coccoides comb. nov. and emendations of the family Spirochaetaceae and the genus Spha

scientific article

Complete genome sequence of the thermophilic sulfate-reducing ocean bacterium Thermodesulfatator indicus type strain (CIR29812(T))

scientific article

Complete genome sequence of the thermophilic sulfur-reducer Desulfurobacterium thermolithotrophum type strain (BSA(T)) from a deep-sea hydrothermal vent

scientific article

Complete genome sequence of the thermophilic sulfur-reducer Hippea maritima type strain (MH(2))

scientific article

Complete genome sequence of the thermophilic, hydrogen-oxidizing Bacillus tusciae type strain (T2) and reclassification in the new genus, Kyrpidia gen. nov. as Kyrpidia tusciae comb. nov. and emendation of the family Alicyclobacillaceae da Costa and

scientific article

Complete genome sequences of Desulfosporosinus orientis DSM765T, Desulfosporosinus youngiae DSM17734T, Desulfosporosinus meridiei DSM13257T, and Desulfosporosinus acidiphilus DSM22704T

scientific article

Draft Genome Sequence of Frankia sp. Strain BCU110501, a Nitrogen-Fixing Actinobacterium Isolated from Nodules of Discaria trinevis

scientific article

Draft Genome Sequence of Frankia sp. Strain BMG5.12, a Nitrogen-Fixing Actinobacterium Isolated from Tunisian Soils

scientific article published on 11 July 2013

Draft Genome Sequence of the Cellulolytic and Xylanolytic Thermophile Clostridium clariflavum Strain 4-2a

scientific article published on 23 July 2015

Draft genome sequence of Frankia sp. strain CN3, an atypical, noninfective (Nod-) ineffective (Fix-) isolate from Coriaria nepalensis

scientific article published on 14 March 2013

Draft genome sequence of Frankia sp. strain QA3, a nitrogen-fixing actinobacterium isolated from the root nodule of Alnus nitida

scientific article published on 21 March 2013

Draft genome sequences of 10 strains of the genus exiguobacterium

scientific article

Erratum to: Complete genome sequence of Atopobium parvulum type strain (IPP 1246).

scientific article published on 15 June 2010

Erratum to: Complete genome sequence of Pirellula staleyi type strain (ATCC 27377)

scientific article

Genome Sequence of Arenibacter algicola Strain TG409, a Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton

scientific article published on 04 August 2016

Genome Sequence of Halomonas sp. Strain MCTG39a, a Hydrocarbon-Degrading and Exopolymeric Substance-Producing Bacterium

scientific article published on 16 July 2015

Genome Sequence of Marinobacter sp. Strain MCTG268 Isolated from the Cosmopolitan Marine Diatom Skeletonema costatum

scientific article published on 08 September 2016

Genome Sequence of Oceanicola sp. Strain MCTG156(1a), Isolated from a Scottish Coastal Phytoplankton Net Sample

scientific article published on 10 August 2017

Genome Sequence of Polycyclovorans algicola Strain TG408, an Obligate Polycyclic Aromatic Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton

scientific article

Genome Sequence of Porticoccus hydrocarbonoclasticus Strain MCTG13d, an Obligate Polycyclic Aromatic Hydrocarbon-Degrading Bacterium Associated with Marine Eukaryotic Phytoplankton

scientific article published on 18 June 2015

Genome Sequence of Roseovarius sp. Strain MCTG156(2b) Isolated from a Phytoplankton Net Trawl on the Scottish West Coast

scientific article published on 31 August 2017

Genome Sequence of Streptomyces viridosporus Strain T7A ATCC 39115, a Lignin-Degrading Actinomycete

scientific article (publication date: 5 July 2013)

Genome sequence and emended description of Leisingera nanhaiensis strain DSM 24252(T) isolated from marine sediment

scientific article

Genome sequence of Frateuria aurantia type strain (Kondô 67(T)), a xanthomonade isolated from Lilium auratium Lindl

scientific article published on 02 October 2013

Genome sequence of Phaeobacter caeruleus type strain (DSM 24564(T)), a surface-associated member of the marine Roseobacter clade

scientific article published on 30 July 2013

Genome sequence of Phaeobacter daeponensis type strain (DSM 23529(T)), a facultatively anaerobic bacterium isolated from marine sediment, and emendation of Phaeobacter daeponensis

scientific article published on 03 October 2013

Genome sequence of Phaeobacter inhibens type strain (T5(T)), a secondary metabolite producing representative of the marine Roseobacter clade, and emendation of the species description of Phaeobacter inhibens

scientific article

Genome sequence of the Antarctic rhodopsins-containing flavobacterium Gillisia limnaea type strain (R-8282(T)).

scientific article published on October 2012

Genome sequence of the Leisingera aquimarina type strain (DSM 24565(T)), a member of the marine Roseobacter clade rich in extrachromosomal elements

scientific article published on 30 July 2013

Genome sequence of the Medicago-nodulating Ensifer meliloti commercial inoculant strain RRI128.

scientific article

Genome sequence of the Thermotoga thermarum type strain (LA3(T)) from an African solfataric spring

scientific article

Genome sequence of the dark pink pigmented Listia bainesii microsymbiont Methylobacterium sp. WSM2598.

scientific article

Genome sequence of the filamentous, gliding Thiothrix nivea neotype strain (JP2(T))

scientific article

Genome sequence of the flexirubin-pigmented soil bacterium Niabella soli type strain (JS13-8(T))

scientific article published on 4 December 2012

Genome sequence of the free-living aerobic spirochete Turneriella parva type strain (H(T)), and emendation of the species Turneriella parva

scientific article published on 25 May 2013

Genome sequence of the homoacetogenic bacterium Holophaga foetida type strain (TMBS4(T)).

scientific article

Genome sequence of the moderately thermophilic halophile Flexistipes sinusarabici strain (MAS10)

scientific article

Genome sequence of the moderately thermophilic sulfur-reducing bacterium Thermanaerovibrio velox type strain (Z-9701(T)) and emended description of the genus Thermanaerovibrio

scientific article published on 02 October 2013

Genome sequence of the moderately thermophilic, amino-acid-degrading and sulfur-reducing bacterium Thermovirga lienii type strain (Cas60314(T)).

scientific article

Genome sequence of the mud-dwelling archaeon Methanoplanus limicola type strain (DSM 2279(T)), reclassification of Methanoplanus petrolearius as Methanolacinia petrolearia and emended descriptions of the genera Methanoplanus and Methanolacinia

scientific article

Genome sequence of the orange-pigmented seawater bacterium Owenweeksia hongkongensis type strain (UST20020801(T)).

scientific article published on October 2012

Genome sequence of the phage-gene rich marine Phaeobacter arcticus type strain DSM 23566(T.).

scientific article published on 30 July 2013

Genome sequence of the phylogenetically isolated spirochete Leptonema illini type strain (3055(T)).

scientific article published on 25 May 2013

Genome sequence of the thermophilic fresh-water bacterium Spirochaeta caldaria type strain (H1(T)), reclassification of Spirochaeta caldaria, Spirochaeta stenostrepta, and Spirochaeta zuelzerae in the genus Treponema as Treponema caldaria comb. nov.

scientific article published on 15 April 2013

High quality draft genome sequence and analysis of Pontibacter roseus type strain SRC-1(T) (DSM 17521(T)) isolated from muddy waters of a drainage system in Chandigarh, India

scientific article published on 9 February 2015

High quality draft genome sequence of Olivibacter sitiensis type strain (AW-6(T)), a diphenol degrader with genes involved in the catechol pathway

scientific article

High-quality draft genome sequence of the Opitutaceae bacterium strain TAV1, a symbiont of the wood-feeding termite Reticulitermes flavipes

scientific article

High-quality-draft genome sequence of the yellow-pigmented flavobacterium Joostella marina type strain (En5(T)).

scientific article published on 15 April 2013

Metagenomes from two microbial consortia associated with Santa Barbara seep oil.

scientific article

Metagenomic analysis of microbial consortium from natural crude oil that seeps into the marine ecosystem offshore Southern California

scientific article

Non-contiguous finished genome sequence and contextual data of the filamentous soil bacterium Ktedonobacter racemifer type strain (SOSP1-21).

scientific article

Non-contiguous finished genome sequence of Aminomonas paucivorans type strain (GLU-3).

scientific article

Non-contiguous finished genome sequence of Bacteroides coprosuis type strain (PC139). ⬇️

scientific article

Non-contiguous finished genome sequence of plant-growth promoting Serratia proteamaculans S4

scientific article published on 30 July 2013

Non-contiguous finished genome sequence of the opportunistic oral pathogen Prevotella multisaccharivorax type strain (PPPA20).

scientific article published on 23 September 2011

Permanent Draft Genome Sequence of Nocardia sp. BMG111209, an Actinobacterium Isolated from Nodules of Casuarina glauca

scientific article published on 04 August 2016

Permanent Improved High-Quality Draft Genome Sequence of Nocardia casuarinae Strain BMG51109, an Endophyte of Actinorhizal Root Nodules of Casuarina glauca

scientific article published on 04 August 2016

Permanent draft genome sequence of Dethiosulfovibrio peptidovorans type strain (SEBR 4207)

scientific article

Permanent draft genome sequence of the gliding predator Saprospira grandis strain Sa g1 (= HR1).

scientific article

Permanent draft genome sequences of the symbiotic nitrogen fixing Ensifer meliloti strains BO21CC and AK58

scientific article

SOP for pathway inference in Integrated Microbial Genomes (IMG)

scientific article published on 22 December 2011

The complete genome sequence of Clostridium indolis DSM 755(T.).

scientific article

The genome sequence of Methanohalophilus mahii SLP(T) reveals differences in the energy metabolism among members of the Methanosarcinaceae inhabiting freshwater and saline environments

scientific article

Thermus oshimai JL-2 and T. thermophilus JL-18 genome analysis illuminates pathways for carbon, nitrogen, and sulfur cycling

scientific article published on 25 February 2013

Whole Genome Sequencing of Thermus oshimai JL-2 and Thermus thermophilus JL-18, Incomplete Denitrifiers from the United States Great Basin

scientific article published on 24 January 2013

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