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List of works by Subhadip Basu

2dSpAn: semiautomated 2-d segmentation, classification and analysis of hippocampal dendritic spine plasticity.

scientific article published on April 2016

3dSpAn: An interactive software for 3D segmentation and analysis of dendritic spines

scientific article

3gClust: Human Protein Cluster Analysis

scientific article published on 30 May 2018

A Consensus Approach for Identification of Protein-Protein Interaction Sites in Homo Sapiens

scientific article published in 2013

A soft computing tool for species classification and prediction of glucomannan content in Amorphophallus genus

scientific article published on 11 September 2017

A survey on Ebola genome and current trends in computational research on the Ebola virus

scientific article published on 29 August 2017

AMS 3.0: prediction of post-translational modifications.

scientific article

AMS 4.0: consensus prediction of post-translational modifications in protein sequences ⬇️

scientific article published on May 4, 2012

Aggregated network centrality shows non-random structure of genomic and proteomic networks

scientific article published on 15 November 2019

Analysis of protein targets in pathogen-host interaction in infectious diseases: a case study on Plasmodium falciparum and Homo sapiens interaction network

scientific article

Assessment of semantic similarity between proteins using information content and topological properties of the Gene Ontology graph

scientific article published on 31 March 2017

Author Correction: Quantitative 3-D morphometric analysis of individual dendritic spines

scientific article published in Scientific Reports

Dendritic Spines Taxonomy: The Functional and Structural Classification • Time-Dependent Probabilistic Model of Neuronal Activation

scientific article published on 27 February 2019

Detection of spreader nodes and ranking of interacting edges in Human-SARS-CoV protein interaction network

scientific article published on 15 April 2020

Detection of spreader nodes in human-SARS-CoV protein-protein interaction network

scientific article published on 06 September 2021

Development of benchmark datasets of multioriented hand gestures for speech and hearing disabled

scientific article published in 2022

Emerging and threatening infectious diseases

scientific article published on 01 November 2018

FunPred 3.0: improved protein function prediction using protein interaction network

scientific article published on 22 May 2019

FunPred-1: protein function prediction from a protein interaction network using neighborhood analysis.

scientific article

Fuzzy SVM with a Novel Membership Function for Prediction of Protein-Protein Interaction Sites in Homo sapiens

scientific article published in 2013

JUPPI: A multi-level feature based method for PPI prediction and a refined strategy for performance assessment

scientific article published on 26 June 2020

Multi-level machine learning prediction of protein-protein interactions in Saccharomyces cerevisiae.

scientific article published on 2 July 2015

Multiscale Opening of Conjoined Fuzzy Objects: Theory and Applications.

scientific article published on 20 November 2015

PDP-CON: prediction of domain/linker residues in protein sequences using a consensus approach.

scientific article

PDP-RF: Protein Domain Boundary Prediction Using Random Forest Classifier

scientific article

PPI_SVM: prediction of protein-protein interactions using machine learning, domain-domain affinities and frequency tables.

scientific article published on 20 March 2011

PPIcons: identification of protein-protein interaction sites in selected organisms

scientific article

PSP_MCSVM: brainstorming consensus prediction of protein secondary structures using two-stage multiclass support vector machines.

scientific article

PartSeg, a Tool for Quantitative Feature Extraction From 3D Microscopy Images for Dummies

scientific article

PartSeg: a tool for quantitative feature extraction from 3D microscopy images for dummies

scientific article

Predicting Protein-Protein Interaction Sites with a Novel Membership Based Fuzzy SVM Classifier

scientific article published on November 2015

Prophylactic Ketamine Treatment Promotes Resilience to Chronic Stress and Accelerates Recovery: Correlation with Changes in Synaptic Plasticity in the CA3 Subregion of the Hippocampus ⬇️

scientific article published on 08 April 2019

Protein function prediction from dynamic protein interaction network using gene expression data

scientific article published on 01 August 2019

Protein function prediction from protein-protein interaction network using gene ontology based neighborhood analysis and physico-chemical features

article

Protein-protein interaction site prediction in Homo sapiens and E. coli using an interaction-affinity based membership function in fuzzy SVM.

scientific article published in October 2015

Quantitative 3-D morphometric analysis of individual dendritic spines.

scientific article published on 23 February 2018

Review of computational methods for virus-host protein interaction prediction: a case study on novel Ebola-human interactions

scientific article published on 26 September 2017

S-Palmitoylation of Synaptic Proteins as a Novel Mechanism Underlying Sex-Dependent Differences in Neuronal Plasticity

article by Monika Zaręba-Kozioł et al published 10 June 2021 in International Journal of Molecular Sciences

SeqPIP-2020: Sequence based Protein Interaction Prediction Contest

scientific article

Serotonin 5-HT4 receptor boosts functional maturation of dendritic spines via RhoA-dependent control of F-actin

scientific article published on 14 February 2020

The Mixture of Autoregressive Hidden Markov Models of Morphology for Dentritic Spines During Activation Process

scientific article published on 12 March 2020

Three-Dimensional Segmentation and Reconstruction of Neuronal Nuclei in Confocal Microscopic Images

scientific article published on 20 August 2019

Towards a crowdsourced framework for online hate speech moderation - a case study in the Indian political scenario

scientific article published on 13 June 2024

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