List of works - Xinan Yang

A c-Myc-regulated stem cell-like signature in high-risk neuroblastoma: A systematic discovery (Target neuroblastoma ESC-like signature).

scientific article

Bridging cancer biology with the clinic: relative expression of a GRHL2-mediated gene-set pair predicts breast cancer metastasis.

scientific article published on 18 February 2013

Chromatin-enriched RNAs mark active and repressive cis-regulation: An analysis of nuclear RNA-seq

scientific article published on 10 February 2020

CisPi: a transcriptomic score for disclosing cis-acting disease-associated lincRNAs

scientific article published on 01 September 2018

Computational prognostic indicators for breast cancer.

scientific article

Correction: Foxf Genes Integrate Tbx5 and Hedgehog Pathways in the Second Heart Field for Cardiac Septation.

scientific article published on 29 December 2016

Foxf genes integrate tbx5 and hedgehog pathways in the second heart field for cardiac septation

scientific article (publication date: October 2014)

GO-Module: functional synthesis and improved interpretation of Gene Ontology patterns ⬇️

scientific article published on March 17, 2011

Identification of a 24-gene prognostic signature that improves the European LeukemiaNet risk classification of acute myeloid leukemia: an international collaborative study

scientific article published on 4 February 2013

Identification of epigenetic modifications that contribute to pathogenesis in therapy-related AML: Effective integration of genome-wide histone modification with transcriptional profiles.

scientific article published on 29 May 2015

In Silico cancer cell versus stroma cellularity index computed from species-specific human and mouse transcriptome of xenograft models: towards accurate stroma targeting therapy assessment.

scientific article

Incorporating genomic, transcriptomic and clinical data: a prognostic and stem cell-like MYC and PRC imbalance in high-risk neuroblastoma.

scientific article published on 3 October 2017

Seq2pathway: an R/Bioconductor package for pathway analysis of next-generation sequencing data

scientific article

Stromal microenvironment processes unveiled by biological component analysis of gene expression in xenograft tumor models

scientific article

Systematic computation with functional gene-sets among leukemic and hematopoietic stem cells reveals a favorable prognostic signature for acute myeloid leukemia ⬇️

scientific article

Transcription-factor-dependent enhancer transcription defines a gene regulatory network for cardiac rhythm

scientific article published on 27 December 2017

Up-regulation of a HOXA-PBX3 homeobox-gene signature following down-regulation of miR-181 is associated with adverse prognosis in patients with cytogenetically abnormal AML.

scientific article published on 17 January 2012

List of works by Xinan Yang

A c-Myc-regulated stem cell-like signature in high-risk neuroblastoma: A systematic discovery (Target neuroblastoma ESC-like signature).

Bridging cancer biology with the clinic: relative expression of a GRHL2-mediated gene-set pair predicts breast cancer metastasis.

Chromatin-enriched RNAs mark active and repressive cis-regulation: An analysis of nuclear RNA-seq

CisPi: a transcriptomic score for disclosing cis-acting disease-associated lincRNAs

Computational prognostic indicators for breast cancer.

Correction: Foxf Genes Integrate Tbx5 and Hedgehog Pathways in the Second Heart Field for Cardiac Septation.

Foxf genes integrate tbx5 and hedgehog pathways in the second heart field for cardiac septation

GO-Module: functional synthesis and improved interpretation of Gene Ontology patterns ⬇️

Identification of a 24-gene prognostic signature that improves the European LeukemiaNet risk classification of acute myeloid leukemia: an international collaborative study

Identification of epigenetic modifications that contribute to pathogenesis in therapy-related AML: Effective integration of genome-wide histone modification with transcriptional profiles.

In Silico cancer cell versus stroma cellularity index computed from species-specific human and mouse transcriptome of xenograft models: towards accurate stroma targeting therapy assessment.

Incorporating genomic, transcriptomic and clinical data: a prognostic and stem cell-like MYC and PRC imbalance in high-risk neuroblastoma.

Seq2pathway: an R/Bioconductor package for pathway analysis of next-generation sequencing data

Stromal microenvironment processes unveiled by biological component analysis of gene expression in xenograft tumor models

Systematic computation with functional gene-sets among leukemic and hematopoietic stem cells reveals a favorable prognostic signature for acute myeloid leukemia ⬇️

Transcription-factor-dependent enhancer transcription defines a gene regulatory network for cardiac rhythm

Up-regulation of a HOXA-PBX3 homeobox-gene signature following down-regulation of miR-181 is associated with adverse prognosis in patients with cytogenetically abnormal AML.