List of works - Shao-Ping Shi

A homology-based pipeline for global prediction of post-translational modification sites.

scientific article published on 13 May 2016

A method to distinguish between lysine acetylation and lysine methylation from protein sequences.

scientific article published on 11 July 2012

A novel algorithm combining support vector machine with the discrete wavelet transform for the prediction of protein subcellular localization.

scientific article published on 6 December 2011

Accurate in silico prediction of species-specific methylation sites based on information gain feature optimization

scientific article published on 26 June 2016

Computational Prediction and Analysis for Tyrosine Post-Translational Modifications via Elastic Net.

scientific article

Computational prediction of species-specific malonylation sites via enhanced characteristic strategy.

scientific article published on 23 December 2016

Computing Prediction and Functional Analysis of Prokaryotic Propionylation

scientific article published on 23 October 2017

DeepCLA: A Hybrid Deep Learning Approach for the Identification of Clathrin

scientific article published on 21 December 2020

Identify submitochondria and subchloroplast locations with pseudo amino acid composition: approach from the strategy of discrete wavelet transform feature extraction.

scientific article published on 19 January 2011

Identifying protein quaternary structural attributes by incorporating physicochemical properties into the general form of Chou's PseAAC via discrete wavelet transform.

scientific article

Incorporating key position and amino acid residue features to identify general and species-specific Ubiquitin conjugation sites.

scientific article published on 26 April 2013

OligoPred: a web-server for predicting homo-oligomeric proteins by incorporating discrete wavelet transform into Chou's pseudo amino acid composition.

scientific article published on 7 July 2011

PLMLA: prediction of lysine methylation and lysine acetylation by combining multiple features ⬇️

scientific article published on March 8, 2012

PMeS: prediction of methylation sites based on enhanced feature encoding scheme

scientific article

PSEA: Kinase-specific prediction and analysis of human phosphorylation substrates

scientific article published on 31 March 2014

PredHydroxy: computational prediction of protein hydroxylation site locations based on the primary structure

scientific article published on 23 December 2014

PredSulSite: prediction of protein tyrosine sulfation sites with multiple features and analysis.

scientific article published on 9 June 2012

Predicting homo-oligomers and hetero-oligomers by pseudo-amino acid composition: an approach from discrete wavelet transformation.

scientific article published on 3 April 2011

Prediction and functional analysis of prokaryote lysine acetylation site by incorporating six types of features into Chou's general PseAAC

scientific article published on 23 October 2018

Progress and challenges in predicting protein methylation sites.

scientific article published on 16 June 2015

Proteome-wide analysis of amino acid variations that influence protein lysine acetylation.

scientific article published on 18 January 2013

Proteomic analysis and prediction of amino acid variations that influence protein posttranslational modifications

scientific article published on 01 September 2019

Proteomic analysis and prediction of human phosphorylation sites in subcellular level reveal subcellular specificity.

scientific article

Site-Specific Systematic Analysis of Lysine Modification Crosstalk

scientific article published on 9 March 2018

SuccFind: a novel succinylation sites online prediction tool via enhanced characteristic strategy.

scientific article published on 10 August 2015

Systematic Analysis of the Genetic Variability That Impacts SUMO Conjugation and Their Involvement in Human Diseases.

scientific article published on 8 July 2015

Systematic analysis and prediction of pupylation sites in prokaryotic proteins

scientific article

The prediction of palmitoylation site locations using a multiple feature extraction method.

scientific article published on 19 January 2013

Using support vector machines to identify protein phosphorylation sites in viruses

scientific article published on 24 December 2014

List of works by Shao-Ping Shi

A homology-based pipeline for global prediction of post-translational modification sites.

A method to distinguish between lysine acetylation and lysine methylation from protein sequences.

A novel algorithm combining support vector machine with the discrete wavelet transform for the prediction of protein subcellular localization.

Accurate in silico prediction of species-specific methylation sites based on information gain feature optimization

Computational Prediction and Analysis for Tyrosine Post-Translational Modifications via Elastic Net.

Computational prediction of species-specific malonylation sites via enhanced characteristic strategy.

Computing Prediction and Functional Analysis of Prokaryotic Propionylation

DeepCLA: A Hybrid Deep Learning Approach for the Identification of Clathrin

Identify submitochondria and subchloroplast locations with pseudo amino acid composition: approach from the strategy of discrete wavelet transform feature extraction.

Identifying protein quaternary structural attributes by incorporating physicochemical properties into the general form of Chou's PseAAC via discrete wavelet transform.

Incorporating key position and amino acid residue features to identify general and species-specific Ubiquitin conjugation sites.

OligoPred: a web-server for predicting homo-oligomeric proteins by incorporating discrete wavelet transform into Chou's pseudo amino acid composition.

PLMLA: prediction of lysine methylation and lysine acetylation by combining multiple features ⬇️

PMeS: prediction of methylation sites based on enhanced feature encoding scheme

PSEA: Kinase-specific prediction and analysis of human phosphorylation substrates

PredHydroxy: computational prediction of protein hydroxylation site locations based on the primary structure

PredSulSite: prediction of protein tyrosine sulfation sites with multiple features and analysis.

Predicting homo-oligomers and hetero-oligomers by pseudo-amino acid composition: an approach from discrete wavelet transformation.

Prediction and functional analysis of prokaryote lysine acetylation site by incorporating six types of features into Chou's general PseAAC

Progress and challenges in predicting protein methylation sites.

Proteome-wide analysis of amino acid variations that influence protein lysine acetylation.

Proteomic analysis and prediction of amino acid variations that influence protein posttranslational modifications

Proteomic analysis and prediction of human phosphorylation sites in subcellular level reveal subcellular specificity.

Site-Specific Systematic Analysis of Lysine Modification Crosstalk

SuccFind: a novel succinylation sites online prediction tool via enhanced characteristic strategy.

Systematic Analysis of the Genetic Variability That Impacts SUMO Conjugation and Their Involvement in Human Diseases.

Systematic analysis and prediction of pupylation sites in prokaryotic proteins

The prediction of palmitoylation site locations using a multiple feature extraction method.

Using support vector machines to identify protein phosphorylation sites in viruses