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List of works by Daniel P Depledge

2018 Colorado Alphaherpesvirus Latency Society Symposium

scientific article published on 09 November 2018

A spliced latency-associated VZV transcript maps antisense to the viral transactivator gene 61.

scientific article published on 21 March 2018

A unique, spliced varicella-zoster virus latency transcript represses expression of the viral transactivator gene 61

article

Acute Retinal Necrosis caused by the zoster vaccine virus.

scientific article published on 2 August 2017

An eIF3d-dependent switch regulates HCMV replication by remodeling the infected cell translation landscape to mimic chronic ER stress

scientific article published on 01 May 2022

Analysis of the reiteration regions (R1 to R5) of varicella-zoster virus

scientific article published on 04 April 2020

Chromatin dynamics and the transcriptional competence of HSV-1 genomes during lytic infections

scientific article published on 14 November 2019

Chromosome and gene copy number variation allow major structural change between species and strains of Leishmania

scientific article published on 28 October 2011

Comparative genomic, transcriptomic, and proteomic reannotation of human herpesvirus 6.

scientific article published on 20 March 2018

Complete Genome Sequence of the Human Herpesvirus 6A Strain AJ from Africa Resembles Strain GS from North America

scientific article

Correction: Specific Capture and Whole-Genome Sequencing of Viruses from Clinical Samples.

scientific article published on 24 January 2012

Decoding the Architecture of the Varicella-Zoster Virus Transcriptome

scientific article published on 06 October 2020

Decoding the architecture of the varicella-zoster virus transcriptome

scientific article published on 25 May 2020

Deep Sequencing of Distinct Preparations of the Live Attenuated Varicella-Zoster Virus Vaccine Reveals a Conserved Core of Attenuating Single-Nucleotide Polymorphisms

scientific article published on 20 July 2016

Deep sequencing of viral genomes provides insight into the evolution and pathogenesis of varicella zoster virus and its vaccine in humans.

scientific article published on 25 October 2013

Detection of Low Frequency Multi-Drug Resistance and Novel Putative Maribavir Resistance in Immunocompromised Pediatric Patients with Cytomegalovirus

scientific article published on 09 September 2016

Direct RNA sequencing on nanopore arrays redefines the transcriptional complexity of a viral pathogen

scientific article published in Nature Communications

Direct RNA sequencing reveals m 6 A modifications on adenovirus RNA are necessary for efficient splicing

scientific article published on 5 December 2019

Direct RNA sequencing reveals m6A modifications on adenovirus RNA are necessary for efficient splicing

scientific article published on 26 November 2020

Enteric viruses evoke broad host immune responses resembling those elicited by the bacterial microbiome

scientific article published on 23 April 2021

Evasion of a Human Cytomegalovirus Entry Inhibitor with Potent Cysteine Reactivity Is Concomitant with the Utilization of a Heparan Sulfate Proteoglycan-Independent Route of Entry

scientific article published on 17 March 2020

Evolution of cocirculating varicella-zoster virus genotypes during a chickenpox outbreak in Guinea-Bissau

scientific article

Genetic and phenotypic intrastrain variation in herpes simplex virus type 1 Glasgow strain 17 syn+-derived viruses

scientific article published on 01 December 2019

Genome Sequence of Human Herpesvirus 7 Strain UCL-1.

scientific article published on 10 October 2013

Going the distance: optimizing RNA-Seq strategies for transcriptomic analysis of complex viral genomes

scientific article published on 10 December 2018

High Viral Diversity and Mixed Infections in Cerebral Spinal Fluid From Cases of Varicella Zoster Virus Encephalitis

scientific article published in October 2018

Human cytomegalovirus haplotype reconstruction reveals high diversity due to superinfection and evidence of within-host recombination

scientific article published on 28 February 2019

In vitro system using human neurons demonstrates that varicella-zoster vaccine virus is impaired for reactivation, but not latency.

scientific article published on 12 April 2016

Islands of linkage in an ocean of pervasive recombination reveals two-speed evolution of human cytomegalovirus genomes

scientific article published on 01 January 2016

Kallikrein-Mediated Cytokeratin 10 Degradation Is Required for Varicella Zoster Virus Propagation in Skin

scientific article published on 15 October 2019

Leishmania-Specific Surface Antigens Show Sub-Genus Sequence Variation and Immune Recognition ⬇️

scientific article published on September 28, 2010

Mode of virus rescue determines the acquisition of VHS mutations in VP22-negative herpes simplex virus 1.

scientific article published on 17 July 2013

Molecular Aspects of Varicella-Zoster Virus Latency

scientific article published on 28 June 2018

Molecular Aspects of Varicella-Zoster Virus Latency

Native RNA sequencing on nanopore arrays redefines the transcriptional complexity of a viral pathogen

Next-generation whole genome sequencing identifies the direction of norovirus transmission in linked patients.

scientific article published on 03 May 2013

Novel splicing and open reading frames revealed by long-read direct RNA sequencing of adenovirus transcripts

scientific article published on 13 December 2019

Nuclear-cytoplasmic compartmentalization of the herpes simplex virus 1 infected cell transcriptome is co-ordinated by the viral endoribonuclease vhs and cofactors to facilitate the translation of late proteins

scientific article published on 26 November 2018

Nuclear-cytoplasmic compartmentalization of the herpes simplex virus 1 infected cell transcriptome is co-ordinated by the viral endoribonuclease vhs and cofactors to facilitate the translation of late proteins

RNA mA modification enzymes shape innate responses to DNA by regulating interferon β

article

Rapid Whole-Genome Sequencing of Mycobacterium tuberculosis Isolates Directly from Clinical Samples

scientific article published on 13 May 2015

Rates of vaccine evolution show strong effects of latency: implications for varicella zoster virus epidemiology

scientific article

Reanalysis of single-cell RNA sequencing data does not support herpes simplex virus 1 latency in non-neuronal ganglionic cells in mice

scientific article published on 6 March 2024

Recombination of Globally Circulating Varicella-Zoster Virus

scientific article published on 29 April 2015

Recurrent herpes zoster in the Shingles Prevention Study: Are second episodes caused by the same varicella-zoster virus strain?

scientific article published on 01 November 2019

Specific capture and whole-genome sequencing of viruses from clinical samples

scientific article (publication date: 2011)

Targeting the m<sup>6</sup>A RNA modification pathway blocks SARS-CoV-2 and HCoV-OC43 replication

scientific article published on 24 June 2021

The architecture of the simian varicella virus transcriptome

scientific article published on 22 November 2021

Use of Whole-Genome Sequencing of Adenovirus in Immunocompromised Pediatric Patients to Identify Nosocomial Transmission and Mixed-Genotype Infection

Using Direct RNA Nanopore Sequencing to Deconvolute Viral Transcriptomes

scientific article published on 01 June 2020

Viral Genome Sequencing Proves Nosocomial Transmission of Fatal Varicella.

scientific article published on 28 August 2016

Viral population analysis and minority-variant detection using short read next-generation sequencing.

scientific article

Whole genome sequencing of Herpes Simplex Virus 1 directly from human cerebrospinal fluid reveals selective constraints in neurotropic viruses

scientific article published on 01 January 2020

Whole genome sequencing of Herpes Simplex Virus 1 directly from human cerebrospinal fluid reveals selective constraints in neurotropic viruses

scientific article published on 6 December 2019

Whole-genome enrichment and sequencing of Chlamydia trachomatis directly from clinical samples

scientific article

tRNA epitranscriptome determines pathogenicity of the opportunistic pathogen <i>Pseudomonas aeruginosa</i>

scientific article published on 7 March 2024

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