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List of works by Bernd Müller-Röber

A Biostimulant Obtained from the Seaweed Ascophyllum nodosum Protects Arabidopsis thaliana from Severe Oxidative Stress

scientific article published on 11 January 2020

A balance to death

scientific article published on 01 November 2018

A cell type-specific view on the translation of mRNAs from ROS-responsive genes upon paraquat treatment of Arabidopsis thaliana leaves

scientific article

A gene regulatory network controlled by the NAC transcription factor ANAC092/AtNAC2/ORE1 during salt-promoted senescence

scientific article published on 22 January 2010

A growth phenotyping pipeline for Arabidopsis thaliana integrating image analysis and rosette area modeling for robust quantification of genotype effects.

scientific article

A highly efficient pipeline for protein expression in Leishmania tarentolae using infrared fluorescence protein as marker

scientific article published on 10 May 2010

A novel bipartite nuclear localization signal with an atypically long linker in DOF transcription factors

scientific article published on 29 January 2010

A novel seed plants gene regulates oxidative stress tolerance in Arabidopsis thaliana

scientific article published on 27 June 2019

A quantitative RT-PCR platform for high-throughput expression profiling of 2500 rice transcription factors

scientific article published on 8 June 2007

A role of Arabidopsis inositol polyphosphate kinase, AtIPK2alpha, in pollen germination and root growth

scientific article published on 23 December 2004

A step-by-step protocol for formaldehyde-assisted isolation of regulatory elements from Arabidopsis thaliana

scientific article

A unique voltage sensor sensitizes the potassium channel AKT2 to phosphoregulation

scientific article published on December 2005

AN OPTIMIZED METHOD FOR THE ISOLATION OF NUCLEI FROM CHLAMYDOMONAS REINHARDTII (CHLOROPHYCEAE)(1).

scientific article

Action of gibberellins on growth and metabolism of Arabidopsis plants associated with high concentration of carbon dioxide

scientific article (publication date: December 2012)

Allelic variants of OsSUB1A cause differential expression of transcription factor genes in response to submergence in rice.

scientific article published on 8 January 2018

An upstream regulator of the 26S proteasome modulates organ size in Arabidopsis thaliana.

scientific article published on 7 March 2013

Arabidopsis AtDGK7, the smallest member of plant diacylglycerol kinases (DGKs), displays unique biochemical features and saturates at low substrate concentration: the DGK inhibitor R59022 differentially affects AtDGK2 and AtDGK7 activity in vitro an

scientific article published on 4 August 2005

Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato

scientific article published on 7 March 2017

Arabidopsis NAC transcription factor JUNGBRUNNEN1 affects thermomemory-associated genes and enhances heat stress tolerance in primed and unprimed conditions ⬇️

scientific article published on October 16, 2012

Arabidopsis inositol polyphosphate 6-/3-kinase is a nuclear protein that complements a yeast mutant lacking a functional ArgR-Mcm1 transcription complex

scientific article

AssemblX: a user-friendly toolkit for rapid and reliable multi-gene assemblies.

scientific article published on 26 January 2017

Assembly and sorting of the tonoplast potassium channel AtTPK1 and its turnover by internalization into the vacuole.

scientific article published on 22 June 2011

Assembly of plant Shaker-like K(out) channels requires two distinct sites of the channel alpha-subunit.

scientific article published on August 2004

At5PTase13 modulates cotyledon vein development through regulating auxin homeostasis

scientific article

AtDGK2, a novel diacylglycerol kinase from Arabidopsis thaliana, phosphorylates 1-stearoyl-2-arachidonoyl-sn-glycerol and 1,2-dioleoyl-sn-glycerol and exhibits cold-inducible gene expression

scientific article

Auxin flow in anther filaments is critical for pollen grain development through regulating pollen mitosis

scientific article

CIRCADIAN CLOCK-ASSOCIATED 1 regulates ROS homeostasis and oxidative stress responses

scientific article

COMPASS for rapid combinatorial optimization of biochemical pathways based on artificial transcription factors

scientific article published on 13 June 2019

Calcium-Dependent Protein Kinase CPK1 Controls Cell Death by In Vivo Phosphorylation of Senescence Master Regulator ORE1

scientific article published on 28 February 2020

Characterizing seamless ligation cloning extract for synthetic biological applications

scientific article published on 13 June 2016

Combined transcription factor profiling, microarray analysis and metabolite profiling reveals the transcriptional control of metabolic shifts occurring during tomato fruit development.

scientific article

Comprehensive Metabolomics Studies of Plant Developmental Senescence

scientific article published in January 2018

Comprehensive dissection of spatiotemporal metabolic shifts in primary, secondary, and lipid metabolism during developmental senescence in Arabidopsis

scientific article published on 21 May 2013

Correction: Genome-Wide Identification of Regulatory Elements and Reconstruction of Gene Regulatory Networks of the Green Alga Chlamydomonas reinhardtii under Carbon Deprivation

scientific article published on 6 January 2014

Could ROS signals drive tissue-specific clocks?

scientific article published on September 2013

DOF transcription factor AtDof1.1 (OBP2) is part of a regulatory network controlling glucosinolate biosynthesis in Arabidopsis

scientific article published on June 2006

Developmentally controlled changes during Arabidopsis leaf development indicate causes for loss of stress tolerance with age

scientific article published on 28 July 2020

Different sequence signatures in the upstream regions of plant and animal tRNA genes shape distinct modes of regulation

scientific article

Differential metabolic and coexpression networks of plant metabolism

article

Distinct roles of the last transmembrane domain in controlling Arabidopsis K+ channel activity.

scientific article

Distributed structures underlie gating differences between the kin channel KAT1 and the Kout channel SKOR.

scientific article published on 10 December 2009

Diurnal and circadian regulation of putative potassium channels in a leaf moving organ

scientific article published in February 2002

Dual control of MAPK activities by AP2C1 and MKP1 MAPK phosphatases regulates defence responses in Arabidopsis

scientific article published on 01 April 2022

EBE, an AP2/ERF Transcription Factor Highly Expressed in Proliferating Cells, Affects Shoot Architecture in Arabidopsis ⬇️

scientific article published on April 24, 2013

Effect of salt stress on genes encoding translation-associated proteins in Arabidopsis thaliana.

scientific article published on 17 August 2012

Enhancement of stress tolerance in transgenic tobacco plants constitutively expressing AtIpk2beta, an inositol polyphosphate 6-/3-kinase from Arabidopsis thaliana

scientific article

Expression of ROS-responsive genes and transcription factors after metabolic formation of H(2)O(2) in chloroplasts

scientific article

Expression of human c-reactive protein in different systems and its purification from Leishmania tarentolae.

scientific article published in April 2011

Extensive modulation of the transcription factor transcriptome during somatic embryogenesis in Arabidopsis thaliana

scientific article

External K+ modulates the activity of the Arabidopsis potassium channel SKOR via an unusual mechanism

scientific article published on 01 April 2006

Fertility control: the role of magnesium transporters in pollen development

scientific article published on 01 July 2009

GLYCOLATE OXIDASE3, a Glycolate Oxidase Homolog of Yeast l-Lactate Cytochrome c Oxidoreductase, Supports l-Lactate Oxidation in Roots of Arabidopsis.

scientific article

GROWTH-REGULATING FACTOR 9 negatively regulates arabidopsis leaf growth by controlling ORG3 and restricting cell proliferation in leaf primordia.

scientific article published on 9 July 2018

GabiPD: the GABI primary database--a plant integrative 'omics' database.

scientific article published on 23 September 2008

Gene regulatory network inference using fused LASSO on multiple data sets

scientific article

Gene structures and processing of Arabidopsis thaliana HYL1-dependent pri-miRNAs

scientific article published on 20 March 2009

Generation of superoxide anion in chloroplasts of Arabidopsis thaliana during active photosynthesis: a focus on rapidly induced genes.

scientific article published on 25 December 2007

Genome draft of the Arabidopsis relative Pachycladon cheesemanii reveals novel strategies to tolerate New Zealand's high ultraviolet B radiation environment

scientific article published on 12 November 2019

Genome-Wide Analysis of ROS Antioxidant Genes in Resurrection Species Suggest an Involvement of Distinct ROS Detoxification Systems during Desiccation

scientific article published on 25 June 2019

Genome-wide analysis of ABA-responsive elements ABRE and CE3 reveals divergent patterns in Arabidopsis and rice

scientific article published in August 2007

Genome-wide identification of regulatory elements and reconstruction of gene regulatory networks of the green alga Chlamydomonas reinhardtii under carbon deprivation.

scientific article

Genome-wide phylogenetic comparative analysis of plant transcriptional regulation: a timeline of loss, gain, expansion, and correlation with complexity

scientific article (publication date: 19 July 2010)

Global analysis of the root hair morphogenesis transcriptome reveals new candidate genes involved in root hair formation in barley

scientific article published on 11 April 2010

Green transcription factors: a chlamydomonas overview.

scientific article published on May 2008

Growth-Regulating Factors (GRFs): A Small Transcription Factor Family with Important Functions in Plant Biology

scientific article

High-Throughput Protein Expression Using a Combination of Ligation-Independent Cloning (LIC) and Infrared Fluorescent Protein (IFP) Detection ⬇️

scientific article (publication date: 26 April 2011)

Identification and mode of inheritance of quantitative trait loci for secondary metabolite abundance in tomato

scientific article published on 13 March 2015

Inositol phospholipid metabolism in Arabidopsis. Characterized and putative isoforms of inositol phospholipid kinase and phosphoinositide-specific phospholipase C.

scientific article

Interplay between polymerase II- and polymerase III-assisted expression of overlapping genes

scientific article published on 7 October 2013

Ion homeostasis: plants feel better with proper control.

scientific article published on August 2007

JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.

scientific article

JUNGBRUNNEN1, a reactive oxygen species-responsive NAC transcription factor, regulates longevity in Arabidopsis

article

L-SCRaMbLE as a tool for light-controlled Cre-mediated recombination in yeast

scientific article

MULTIPASS, a rice R2R3-type MYB transcription factor, regulates adaptive growth by integrating multiple hormonal pathways

scientific article published on 26 August 2013

Members of the Arabidopsis AtTPK/KCO family form homomeric vacuolar channels in planta

scientific article published on 19 September 2006

Molecular Mechanisms Preventing Senescence in Response to Prolonged Darkness in a Desiccation-Tolerant Plant

scientific article published on 22 May 2018

Molecular mechanisms of desiccation tolerance in the resurrection glacial relic Haberlea rhodopensis.

scientific article published on 21 September 2012

Multifaceted regulatory function of tomato SlTAF1 in the response to salinity stress

scientific article published on 11 November 2019

NAC Transcription Factor ORE1 and Senescence-Induced BIFUNCTIONAL NUCLEASE1 (BFN1) Constitute a Regulatory Cascade in Arabidopsis ⬇️

scientific article published on January 22, 2013

NAC transcription factor JUNGBRUNNEN1 enhances drought tolerance in tomato.

scientific article published on 22 June 2017

NAC transcription factor speedy hyponastic growth regulates flooding-induced leaf movement in Arabidopsis

scientific article published on 20 December 2013

Natural products from resurrection plants: potential for medical applications

scientific article published on 26 March 2014

Network-based segmentation of biological multivariate time series

scientific article

ORE1 balances leaf senescence against maintenance by antagonizing G2-like-mediated transcription

scientific article published on 5 March 2013

ORS1, an H2O2-Responsive NAC Transcription Factor, Controls Senescence in Arabidopsis thaliana ⬇️

scientific article published on February 8, 2011

Orphan transcripts in Arabidopsis thaliana: identification of several hundred previously unrecognized genes

scientific article published on 01 July 2005

Overexpression of AtWRKY30 enhances abiotic stress tolerance during early growth stages in Arabidopsis thaliana.

scientific article published on 21 June 2013

Overproduction of Chl b Retards Senescence Through Transcriptional Reprogramming in Arabidopsis ⬇️

scientific article published on January 27, 2012

Oxidative stress provokes distinct transcriptional responses in the stress-tolerant atr7 and stress-sensitive loh2 Arabidopsis thaliana mutants as revealed by multi-parallel quantitative real-time PCR analysis of ROS marker and antioxidant genes ⬇️

scientific article published on June 4, 2012

PLAZA 3.0: an access point for plant comparative genomics

scientific article

PageRank-based identification of signaling crosstalk from transcriptomics data: the case of Arabidopsis thaliana

scientific article

PhiReX: a programmable and red light-regulated protein expression switch for yeast

scientific article published on September 2017

Phospholipase C is required for the control of stomatal aperture by ABA.

scientific article published on April 2003

Physiological Profiling of Embryos and Dormant Seeds in Two <i>Arabidopsis</i> Accessions Reveals a Metabolic Switch in Carbon Reserve Accumulation

scientific article published on 02 December 2020

Phytotoxicity of cobalt ions on the duckweed Lemna minor - Morphology, ion uptake, and starch accumulation

scientific article published on 31 March 2015

Plant-Derived Transcription Factors for Orthologous Regulation of Gene Expression in the Yeast Saccharomyces cerevisiae.

scientific article

PlnTFDB: an integrative plant transcription factor database

scientific article published on 7 February 2007

PlnTFDB: updated content and new features of the plant transcription factor database

scientific article published on 25 October 2009

Positional information resolves structural variations and uncovers an evolutionarily divergent genetic locus in accessions of Arabidopsis thaliana.

scientific article

Primary carbohydrate metabolism genes participate in heat-stress memory at the shoot apical meristem of Arabidopsis thaliana

scientific article published in 2021

Priming and memory of stress responses in organisms lacking a nervous system

scientific article published on 20 August 2015

Promotion of growth by elevated carbon dioxide is coordinated through a flexible transcriptional network in Arabidopsis

scientific article published on 18 January 2013

Protein phosphatase AP2C1 negatively regulates basal resistance and defense responses to Pseudomonas syringae

scientific article published on 6 January 2017

Putative alternative translation start site-encoding nucleotides of CPR5 regulate growth and resistance

scientific article published on 29 June 2020

QuantPrime--a flexible tool for reliable high-throughput primer design for quantitative PCR.

scientific article

ROS homeostasis during development: an evolutionary conserved strategy

scientific article published on 28 July 2012

ROS-mediated abiotic stress-induced programmed cell death in plants

scientific article

Regulation of photosynthesis and transcription factor expression by leaf shading and re-illumination in Arabidopsis thaliana leaves

scientific article published on 5 March 2011

Regulation of shoot branching in Arabidopsis by trehalose 6-phosphate

scientific article published on 17 October 2020

Reversal of senescence by N resupply to N-starved Arabidopsis thaliana: transcriptomic and metabolomic consequences

scientific article

Rice DUR3 mediates high-affinity urea transport and plays an effective role in improvement of urea acquisition and utilization when expressed in Arabidopsis

scientific article published on 19 October 2011

SALT-RESPONSIVE ERF1 is a negative regulator of grain filling and gibberellin-mediated seedling establishment in rice

scientific article published on 17 September 2013

Salt-Related MYB1 Coordinates Abscisic Acid Biosynthesis and Signaling during Salt Stress in Arabidopsis

scientific article

Salt-responsive ERF1 regulates reactive oxygen species-dependent signaling during the initial response to salt stress in rice

scientific article published on 25 June 2013

Salt-triggered expression of the ANAC092-dependent senescence regulon in Arabidopsis thaliana

scientific article published on June 2010

Segmentation of biological multivariate time-series data

scientific article

Synthetic Promoters and Transcription Factors for Heterologous Protein Expression in Saccharomyces cerevisiae

scientific article published on 19 October 2017

Systems Analysis of the Response of Photosynthesis, Metabolism, and Growth to an Increase in Irradiance in the Photosynthetic Model Organism Chlamydomonas reinhardtii

scholarly article by Tabea Mettler et al published June 2014 in The Plant Cell

The ATP binding cassette transporter AtMRP5 modulates anion and calcium channel activities in Arabidopsis guard cells

scientific article

The Arabidopsis Transcription Factor MYB112 Promotes Anthocyanin Formation during Salinity and under High Light Stress

scientific article published on 16 September 2015

The Arabidopsis thaliana onset of leaf death 12 mutation in the lectin receptor kinase P2K2 results in an autoimmune phenotype

scientific article published in 2023

The Chlamydomonas genome reveals the evolution of key animal and plant functions

scientific article

The DOF transcription factor OBP1 is involved in cell cycle regulation in Arabidopsis thaliana

scientific article

The LysM Receptor-Like Kinase LysM RLK1 Is Required to Activate Defense and Abiotic-Stress Responses Induced by Overexpression of Fungal Chitinases in Arabidopsis Plants ⬇️

scientific article published on March 28, 2012

The NAC Transcription Factor SlNAP2 Regulates Leaf Senescence and Fruit Yield in Tomato

scientific article published on 14 May 2018

The Selaginella genome identifies genetic changes associated with the evolution of vascular plants

scientific article

The contribution of SERF1 to root-to-shoot signaling during salinity stress in rice

scientific article

The diversity of quinoa morphological traits and seed metabolic composition

scientific article published on 20 June 2022

The dual role of LESION SIMULATING DISEASE 1 as a condition-dependent scaffold protein and transcription regulator

scientific article published on 27 May 2017

The highly charged region of plant beta-type phosphatidylinositol 4-kinase is involved in membrane targeting and phospholipid binding

scientific article published in March 2006

The nuclear proteome of the green alga Chlamydomonas reinhardtii ⬇️

scientific article published on December 9, 2011

The plant circadian clock regulates autophagy rhythm through transcription factor LUX ARRHYTHMO

scientific article published in 2022

The plant multidrug resistance ABC transporter AtMRP5 is involved in guard cell hormonal signalling and water use.

scientific article published on January 2003

The plastid metalloprotease FtsH6 and small heat shock protein HSP21 jointly regulate thermomemory in Arabidopsis

scientific article published on 26 August 2016

The role of bZIP transcription factors in green plant evolution: adaptive features emerging from four founder genes

scientific article published in 2008

Tomato fruit ripening factor NOR controls leaf senescence

scientific article published on 01 May 2019

Transcription Factor Arabidopsis Activating Factor1 Integrates Carbon Starvation Responses with Trehalose Metabolism.

scientific article

Transcription factor AtDOF4;2 affects phenylpropanoid metabolism in Arabidopsis thaliana

scientific article

Transcription factor OsHsfC1b regulates salt tolerance and development in Oryza sativa ssp. japonica

scientific article

Transcription factor RD26 is a key regulator of metabolic reprogramming during dark-induced senescence

scientific article published on 16 April 2018

Transcription factors relevant to auxin signalling coordinate broad-spectrum metabolic shifts including sulphur metabolism

scientific article published on January 2008

Transcriptional control of ROS homeostasis by KUODA1 regulates cell expansion during leaf development

scientific article

Transcriptomic analysis of nitrogen starvation- and cultivar-specific leaf senescence in winter oilseed rape (Brassica napus L.).

scientific article published on 22 January 2015

Translatome and metabolome effects triggered by gibberellins during rosette growth in Arabidopsis ⬇️

scientific article published on January 30, 2012

Vacuolar membrane localization of the Arabidopsis 'two-pore' K+ channel KCO1.

scientific article

m5C Methylation Guides Systemic Transport of Messenger RNA over Graft Junctions in Plants

scientific article published on 18 July 2019

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